bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PAPOLB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PAPOLB 0 2.011 -1.500 2.280

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PAPOLB Ubiquitylation K160 -0.269 _LQEEVK(gl)DLR_

Background Information for PAPOLB:


Pubmed-PAPOLB »
Uniprot-PAPOLB »
Biogrid-PAPOLB »
ProteomicsDB-PAPOLB »

Tumorportal-PAPOLB »
COSMIC-PAPOLB »
GenomeRNAi-PAPOLB »
Genecards-PAPOLB


Protein-protein Interactions for PAPOLB
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in PAPOLB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Nucleotidyltransferase IPR002934 0.13
Category members PolA_pol_RNA-bd_dom IPR007010 0.11
Category members PolA_pol_cen_dom IPR007012 0.11
Category members NuclTrfase_I_C IPR011068 0.11
Category members PolyA_polymerase IPR014492 0.11


Protein complexes (CORUM database) featuring PAPOLB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PAPOLB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0000398 mRNA splicing, via spliceosome Database 7.06
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006369 termination of RNA polymerase II transcription Database 0.87
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members Pathway Pathway_310 KEGG_RNA_DEGRADATION 0 0.26
Category members GO Category GO:0006378 mRNA polyadenylation Database 0.1
Category members GO Category GO:0043631 RNA polyadenylation Database 0.1
Category members GO Category GO:0004652 polynucleotide adenylyltransferase activity Database 0
Category members GO Category GO:0016779 nucleotidyltransferase activity Database 0
Category members GO Category GO:0031123 RNA 3'-end processing Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015