bioLOGIC-db

bioLOGIC Data

Query: DCP1B

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
DCP1B	0	0.683	0.790	-0.010

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
DCP1B	Phosphorylation	S275	0.605	0.416	_SLS(ph)YEEPR_
DCP1B	Ubiquitylation	K12		-0.338	_(ac)AAVAAGGLVGK(gl)GR_
DCP1B	Phosphorylation	S511	-0.866	-0.621	_TPNTEQQTPLFQVIS(ph)PQR_

ProteomicsDB-DCP1B »

Protein-protein Interactions for DCP1B

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait BAG4	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait BOD1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CCDC102B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CCDC60	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DCP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DDX6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait EDC3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ERP44	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FAM167A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GRN	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait IRF2BP1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LPXN	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PIM1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait SH3BGR	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF704	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in DCP1B

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring DCP1B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring DCP1B

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Pathway	Pathway_771	REACTOME_METABOLISM_OF_RNA	0	INF
Category members	Pathway	Pathway_773	REACTOME_METABOLISM_OF_MRNA	0	INF
Category members	GO Category	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Database	INF
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0005829	cytosol	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	GO Category	GO:0016070	RNA metabolic process	Database	INF
Category members	GO Category	GO:0016071	mRNA metabolic process	Database	INF
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0043231	intracellular membrane-bounded organelle	Database	0.43
Category members	Pathway	Pathway_310	KEGG_RNA_DEGRADATION	0	0.26
Category members	GO Category	GO:0016787	hydrolase activity	Database	0.22
Category members	GO Category	GO:0043928	exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	Database	0.21
Category members	GO Category	GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Database	0.17
Category members	Pathway	Pathway_200	PID_P73PATHWAY	0	0.11
Category members	Pathway	Pathway_842	REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY	0	0.1
Category members	Pathway	Pathway_843	REACTOME_MRNA_DECAY_BY_5_TO_3_EXORIBONUCLEASE	0	0