RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
LAP3	1	1.320	-0.850	0.723			1.542	1.333
CASP8	1	1.120	-1.090
ERMP1	1	-1.880	3.300				1.097	0.496
PSMC1	1	-0.370	0.950	-0.345	-0.122	0.523	0.050	0.292
BLMH	1	0.710	-0.440				1.895	-1.446
CLPP	1	-0.630	0.820	1.576			0.250	-0.250
STAMBPL1	1	0.190	0.050
APH1B	1	-1.760	3.070
SEC11C	1	2.470	-1.120
MPND	0	-0.910	0.430				-3.706	-1.159
QPCTL	0	0.170	-0.310	-0.995			-0.232	0.008
TFRC	0	-0.840	0.870				-1.270	-0.277
TFRC	0	-0.840	0.870	0.348			-1.075	-0.602
PPP2R5C	0	0.790	-0.490
PPP2R5C	0	0.790	-0.490				-0.455	-0.019
PSEN1	0	0.930	-1.110
DESI1	0	-1.030	1.510
LGMN	0	-0.120	0.250				0.435	0.710
PSMB5	0	-0.630	0.970	-0.586		0.544	0.211	-0.265
HM13	0	-0.640	0.080				-0.261	0.099
LONP2	0	0.380	-0.520				-0.179	0.071
CAPN15	0	-0.060	0.660
LTA4H	0	-1.370	1.580	-0.512				-2.457
SPCS1	0	0.420	-0.570				-1.094	-0.251
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
QPCT	0	0.650	-1.160		-1.847	-0.648
PARK7	0	-0.660	0.930
CTSD	0	0.580	-0.790	-0.768		-2.790	-0.655	-1.981
SPCS2	0	-0.420	0.000				-0.022	0.483
SPCS2	0	-0.420	0.000
UCHL3	0	-0.250	0.500				0.854	0.717
PEPD	0	-0.540	1.250
ATG4C	0	1.830	-1.180
NCLN	0						0.271	0.229
SHFM1	0	-0.650	1.350
SHFM1	0	-0.010	-0.190
SPCS3	0	-0.720	-0.200				0.420	0.351
CNDP2	0	0.750	0.060
ESPL1	0	0.260	0.370
PCSK6	0	0.020	-0.380
FURIN	0	1.280	-0.730
SEC11A	0	0.080	-0.570	1.439			0.787	0.419
SEC11A	0	0.080	-0.570
USP25	0	-0.970	0.900
PSMC2	0	0.410	-0.640	-0.349		-0.102	-0.395	-0.245
DCD	0	0.950	-0.100			-4.998		-2.365
NCSTN	0	-1.540	2.100				0.618	0.379
CAPN2	0	-1.140	1.400			0.314
CAPN2	0	-1.140	1.400	0.522			0.716	-0.611
BAP1	0			-0.249
CASP3	0	0.570	-0.390
TPP1	0	-0.540	0.760	0.431			1.429	1.399
KLK6	0	-0.160	-0.280
THOP1	0	1.750	-0.990
HMCES	0	-0.360	0.800
IMMP2L	0	0.650	-0.270

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
APH1B	Ubiquitylation	K102		-0.148	_ASEGLK(gl)SINPGETAPSMR_
ATG4C	Ubiquitylation	K403	0.208		_ASEEITK(gl)MLK_
BAP1	Phosphorylation	S292		0.575	_SASNKS(ph)PLVLEANR_
BAP1	Phosphorylation	S325	-0.806	-0.868	_APAASEGNHTDGAEEAAGSCAQAPS(ph)HSPPNKPK_
BAP1	Phosphorylation	S327		-1.164	_APAASEGNHTDGAEEAAGSCAQAPSHS(ph)PPNKPK_
BAP1	Phosphorylation	T517		-0.361	_SANPT(ph)RPSSPVTSHISK_
BAP1	Phosphorylation	S520		0.193	_SANPTRPS(ph)SPVTSHISK_
BAP1	Phosphorylation	S521	-0.315	-0.535	_SANPTRPSS(ph)PVTSHISK_
CAPN15	Ubiquitylation	K47	0.091	0.954	_LSVEEQK(gl)WPCAR_
CAPN15	Ubiquitylation	K293	-0.521	0.688	_LAELLSGK(gl)R_
CAPN15	Ubiquitylation	K348	-1.734	-1.342	_YTPASPSSPDFTTWSCAK(gl)CTLR_
CAPN15	Ubiquitylation	K686		-0.401	_MLSSK(gl)EAGFLMGASCGGGNMK_
CAPN15	Ubiquitylation	K1053		0.569	_K(gl)AAQAFLSDWTASK_
CASP3	Ubiquitylation	K11	-0.053	-0.687	_(ac)MENTENSVDSK(gl)SIK_
CASP3	Ubiquitylation	K14	-0.455	-0.687	_SIK(gl)NLEPK_
CASP3	Ubiquitylation	K57	-0.304	-1.817	_NFHK(gl)STGMTSR_
CASP3	Ubiquitylation	K82	-0.268	-0.605	_NLK(gl)YEVR_
CASP8	Ubiquitylation	K183	1.917		_IINDYEEFSK(gl)ER_
CASP8	Ubiquitylation	K461		-2.031	_NMGK(gl)QMPQPTFTLR_
CNDP2	Ubiquitylation	K21	-0.168		_YIDENQDRYIKK(gl)_
CNDP2	Ubiquitylation	K202	0.031		_K(gl)KPCITYGLR_
DESI1	Ubiquitylation	K18	0.216	0.695	_LYVYDLSK(gl)GLAR_
ERMP1	Ubiquitylation	K704		0.868	_TFHDLEGNAVK(gl)R_
ESPL1	Ubiquitylation	K64		-0.593	_ACNQQLTAK(gl)LACPR_
ESPL1	Ubiquitylation	K515		-0.310	_LQVESLK(gl)K_
ESPL1	Ubiquitylation	K516		-0.310	_LQVESLK(gl)K_
ESPL1	Ubiquitylation	K567		-1.164	_AGDKELQLK(gl)TLR_
ESPL1	Ubiquitylation	K593		-0.279	_EELQAYK(gl)AVR_
ESPL1	Ubiquitylation	K760		-0.694	_ELLTK(gl)GQAPAVR_
ESPL1	Phosphorylation	S1126	-1.840	-1.996	_EPGPIAPSTNSS(ph)PVLK_
ESPL1	Ubiquitylation	K1252		-0.245	_VLQSGLK(gl)FVAAR_
ESPL1	Ubiquitylation	K1832	-1.682	-1.025	_LQELLQDCGWK(gl)YPDR_
FURIN	Ubiquitylation	K789	-1.074	-0.470	_TAFIK(gl)DQSAL_
HM13	Ubiquitylation	K61	-0.651	0.407	_GK(gl)NASDMPETITSR_
HM13	Ubiquitylation	K241		1.147	_SFEAPIK(gl)LVFPQDLLEK_
HM13	Ubiquitylation	K285		1.086	_FDISLKK(gl)_
HM13	Ubiquitylation	K370	-0.544	0.500	_EGTEASASK(gl)GLEK_
HMCES	Ubiquitylation	K89	-0.340	-0.687	_ESDPSK(gl)LQFNTTNCR_
HMCES	Ubiquitylation	K105		-0.444	_SDTVMEK(gl)R_
HMCES	Ubiquitylation	K151		-0.802	_TEK(gl)SGSIGAADSPENWEK_
HMCES	Ubiquitylation	K275		-0.863	_NNTPECLAPVDLVVK(gl)K_
HMCES	Ubiquitylation	K294		-0.255	_MLQWLATK(gl)SPK_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
IMMP2L	Ubiquitylation	K83		-1.186	_GDIVSLVSPK(gl)NPEQK_
LGMN	Ubiquitylation	K125	0.264	-0.241	_GDAEAVK(gl)GIGSGK_
LGMN	Ubiquitylation	K224	0.675	0.933	_ESSYACYYDEK(gl)R_
LGMN	Ubiquitylation	K287		1.040	_VMQFQGMK(gl)R_
LTA4H	Ubiquitylation	K58	0.704	0.961	_SLVLDTK(gl)DLTIEK_
LTA4H	Ubiquitylation	K73	0.148	0.867	_VVINGQEVK(gl)YALGER_
LTA4H	Ubiquitylation	K337		-0.881	_LFGEK(gl)FR_
LTA4H	Ubiquitylation	K519	-0.512	-0.452	_APLPLGHIK(gl)R_
NCLN	Ubiquitylation	K99	-1.283	-0.154	_LLDFSYEQYQK(gl)ALR_
NCLN	Ubiquitylation	K286	-1.603	-0.494	_FNYQGTK(gl)R_
NCLN	Ubiquitylation	K359	-1.739	-0.915	_FSMVHK(gl)R_
NCLN	Ubiquitylation	K409	-1.875	-0.411	_VDSK(gl)TLTR_
NCSTN	Ubiquitylation	K110		1.107	_DLMEK(gl)LK_
PARK7	Ubiquitylation	K41	0.222	0.590	_VTVAGLAGK(gl)DPVQCSR_
PARK7	Ubiquitylation	K93	-0.291		_EILK(gl)EQENR_
PARK7	Ubiquitylation	K132	0.639		_VTTHPLAKDK(gl)_
PCSK6	Ubiquitylation	K573		-0.143	_SQLLAK(gl)R_
PEPD	Ubiquitylation	K200	-0.011		_YTNK(gl)ISSEAHR_
PEPD	Ubiquitylation	K211		-0.294	_EVMK(gl)AVK_
PPP2R5C	Ubiquitylation	K232	-0.302		_FLESPDFQPNIAK(gl)K_
PPP2R5C	Ubiquitylation	K233	-0.302	0.665	_FLESPDFQPNIAKK(gl)_
PPP2R5C	Ubiquitylation	K409		-0.010	_QLAK(gl)CVSSPHFQVAER_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
PSMB5	Ubiquitylation	K91		1.377	_ATAGAYIASQTVK(gl)K_
PSMB5	Ubiquitylation	K92	0.684	0.901	_ATAGAYIASQTVKK(gl)_
PSMB5	Ubiquitylation	K140		-0.990	_ISVAAASK(gl)_
PSMB5	Ubiquitylation	K257	-0.894	-0.379	_VSSDNVADLHEK(gl)YSGSTP_
PSMC1	Ubiquitylation	K23	-1.788		_K(gl)KYEPPVPTR_
PSMC1	Ubiquitylation	K24	-0.104	1.174	_K(gl)YEPPVPTR_
PSMC1	Ubiquitylation	K48	-1.854	-1.146	_GPDAASK(gl)LPLVTPHTQCR_
PSMC1	Ubiquitylation	K91	1.245		_NQEQMKPLEEK(gl)QEEER_
PSMC1	Ubiquitylation	K98	0.442	4.780	_SK(gl)VDDLR_
PSMC1	Ubiquitylation	K258		0.143	_VVGSELIQK(gl)YLGDGPK_
PSMC1	Ubiquitylation	K265		-1.189	_YLGDGPK(gl)LVR_
PSMC1	Ubiquitylation	K326	0.108	0.246	_GDVK(gl)VIMATNR_
PSMC1	Ubiquitylation	K359	-0.457	-0.853	_KIEFPLPDEK(gl)TK_
PSMC1	Ubiquitylation	K361	-1.277	-0.679	_IEFPLPDEKTK(gl)_
PSMC1	Ubiquitylation	K413	0.108	0.270	_MK(gl)VTNEDFKK_
PSMC1	Ubiquitylation	K420	-0.156	0.859	_MKVTNEDFK(gl)K_
PSMC1	Ubiquitylation	K421	0.068	0.648	_VTNEDFKK(gl)_
PSMC1	Ubiquitylation	K429	-0.735		_SKENVLYK(gl)K_
PSMC1	Ubiquitylation	K430	-0.618		_SKENVLYKK(gl)_
PSMC1	Phosphorylation	T434	-0.194	0.263	_KQEGT(ph)PEGLYL_
PSMC2	Ubiquitylation	K34	-0.054	0.133	_ALDEGDIALLK(gl)TYGQSTYSR_
PSMC2	Ubiquitylation	K57	0.210	0.513	_QVEDDIQQLLK(gl)K_
PSMC2	Ubiquitylation	K58	-0.922	0.072	_K(gl)INELTGIK_
PSMC2	Ubiquitylation	K100	-0.369	-0.790	_CTK(gl)IINADSEDPK_
PSMC2	Ubiquitylation	K116	0.388	0.726	_YIINVK(gl)QFAK_
PSMC2	Ubiquitylation	K186	0.125	0.175	_EQIEK(gl)LR_
PSMC2	Ubiquitylation	K222		-0.623	_GVLLFGPPGTGK(gl)TLCAR_
PSMC2	Ubiquitylation	K248	0.800	0.448	_VIGSELVQK(gl)YVGEGAR_
PSMC2	Ubiquitylation	K402	0.399	0.263	_K(gl)IATEKDFLEAVNK_
PSMC2	Ubiquitylation	K407	-0.357	0.298	_IATEK(gl)DFLEAVNK_
PSMC2	Ubiquitylation	K418	-0.387	0.079	_VIK(gl)SYAK_
PSMC2	Ubiquitylation	K422	-0.462	-0.406	_SYAK(gl)FSATPR_
SEC11A	Ubiquitylation	K109		1.123	_VLK(gl)IHEK_
SEC11A	Ubiquitylation	K123	-1.452	0.393	_FLTK(gl)GDNNAVDDR_
SEC11C	Ubiquitylation	K126		-0.021	_FLTK(gl)GDNNEVDDR_
SEC11C	Ubiquitylation	K147		0.157	_EGQNWLEK(gl)K_
SHFM1	Ubiquitylation	K66	0.280		_HGYK(gl)METS_
SPCS2	Ubiquitylation	K38		0.883	_SGLLDK(gl)WK_
SPCS2	Ubiquitylation	K57		0.447	_WDGSAVK(gl)NSLDDSAKK_
SPCS2	Ubiquitylation	K71		0.408	_VLLEK(gl)YK_
SPCS2	Ubiquitylation	K169		0.808	_FDDK(gl)YTLK_
SPCS2	Ubiquitylation	K191	-0.072	0.376	_EAEFTK(gl)SIAK_
SPCS3	Ubiquitylation	K49		-0.026	_IMLK(gl)NVEDFTGPR_
SPCS3	Ubiquitylation	K121		-0.030	_LLLK(gl)DMK_
STAMBPL1	Phosphorylation	S240	2.454		_SDATNYAS(ph)HSPPVNR_
STAMBPL1	Phosphorylation	S242	1.023	-0.406	_SDATNYASHS(ph)PPVNR_
TFRC	Ubiquitylation	K53	-1.280	0.042	_LAVDEEENADNNTK(gl)ANVTKPK_
TFRC	Ubiquitylation	K371		1.291	_MVTSESK(gl)NVK_
TFRC	Ubiquitylation	K374		1.291	_MVTSESK(gl)NVK_
THOP1	Ubiquitylation	K45	1.039		_ELIEQTK(gl)R_
THOP1	Ubiquitylation	K317		-0.699	_AVILELK(gl)R_
USP25	Ubiquitylation	K60	-1.743		_NAK(gl)TPQQEETTYYQTALPGNDR_
USP25	Ubiquitylation	K201	-1.591	-1.154	_LVLNYK(gl)PPSNAQDLPR_
USP25	Ubiquitylation	K250	-0.329	0.581	_AVEILK(gl)DAFK_
USP25	Ubiquitylation	K254	-0.426	0.176	_DAFK(gl)SNDSQQQDVSEFTHK_
USP25	Ubiquitylation	K444	-0.638	-0.833	_YLSYGSGPK(gl)R_
USP25	Ubiquitylation	K520	-0.659		_SVIHK(gl)PFTQSR_
USP25	Ubiquitylation	K584	-0.007		_TIELMYSDK(gl)SMIQVPYR_
USP25	Ubiquitylation	K630	-0.071		_YNDIAVTK(gl)SSWEELVR_
USP25	Ubiquitylation	K715	-0.174	-0.164	_ALQEK(gl)LLASQK_