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Query: SHFM1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SHFM1 0 1.630 -0.650 1.350
SHFM1 0 1.630 -0.010 -0.190

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SHFM1 Ubiquitylation K66 0.280 _HGYK(gl)METS_

Background Information for SHFM1:





Protein-protein Interactions for SHFM1

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in SHFM1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring SHFM1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1154 DSS1 complex Database 1.97


Categories featuring SHFM1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0032039 integrator complex Database 4.79
Category members GO Category GO:0000502 proteasome complex Database 3.17
Category members GO Category GO:0000724 double-strand break repair via homologous recombination Database 2.41
Category members Pathway Pathway_900 KEGG_PROTEASOME 0 1.34
Category members Pathway Pathway_343 KEGG_HOMOLOGOUS_RECOMBINATION 0 0.12
Category members GO Category GO:0008233 peptidase activity Database 0.02
Category members Disease phenotype Split_hand-split_foot_malformation Split hand-split foot malformation Database 0
Category members GO Category GO:0006508 proteolysis Database 0


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