Results for the Category
KEGG_HOMOLOGOUS_RECOMBINATION
(Pathway_343)
RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
W | |||||||
Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
---|---|---|---|---|---|---|---|---|
RPA1 | 6 | 0.500 | 0.350 | 3.133 | 3.046 | 0.303 | 1.770 | 2.112 |
RPA3 | 3 | -0.760 | 1.900 | 1.805 | ||||
RAD50 | 3 | 0.350 | -0.420 | 0.165 | 0.571 | 0.509 | 0.691 | 0.587 |
RPA2 | 3 | -1.830 | 3.700 | 1.524 | ||||
RPA2 | 3 | -1.830 | 3.700 | 2.592 | ||||
NBN | 2 | -0.220 | -0.170 | 0.708 | 0.569 | -0.563 | 0.354 | |
TOP3A | 1 | 2.070 | -0.580 | -0.370 | 0.720 | |||
TOP3A | 1 | 2.070 | -0.580 | 0.498 | 0.705 | |||
MRE11A | 0 | 1.600 | -0.730 | 0.145 | 0.420 | |||
MRE11A | 0 | 1.600 | -0.730 | 0.023 | 0.453 | 0.150 | ||
RAD51 | 0 | -1.260 | 1.920 | |||||
POLD1 | 0 | 1.600 | -1.300 | -0.932 | 0.362 | 0.283 | ||
POLD1 | 0 | 1.600 | -1.300 | |||||
POLD3 | 0 | -0.343 | ||||||
SSBP1 | 0 | 0.580 | -0.460 | 0.755 | 0.990 | -0.115 | ||
SSBP1 | 0 | 0.580 | -0.460 | |||||
POLD2 | 0 | -0.020 | 0.200 | 0.123 | ||||
RAD51C | 0 | 0.400 | 0.260 | |||||
XRCC3 | 0 | 0.420 | -0.620 | |||||
SHFM1 | 0 | -0.650 | 1.350 | |||||
SHFM1 | 0 | -0.010 | -0.190 | |||||
EME1 | 0 | |||||||
MUS81 | 0 | |||||||
RAD51B | 0 | -1.570 | 1.980 | |||||
RAD54B | 0 | 1.010 | -0.510 | |||||
BLM | 0 | 1.270 | -0.830 | -0.850 | -0.141 | 0.144 | 0.151 | 0.149 |
BLM | 0 | 1.270 | -0.830 |
Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
---|---|---|---|---|---|
BLM | Phosphorylation | S144 | 1.234 | _KLEFSSS(ph)PDSLSTINDWDDMDDFDTSETSK_ | |
EME1 | Ubiquitylation | K449 | 0.158 | _AVAEAPFK(gl)_ | |
EME1 | Ubiquitylation | K450 | 0.225 | _AVAEAPFKK(gl)_ | |
MRE11A | Ubiquitylation | K387 | 0.442 | _FSQK(gl)FVDR_ | |
MUS81 | Phosphorylation | S95 | -0.268 | -0.392 | _TSGGDHAPDS(ph)PSGENSPAPQGR_ |
NBN | Phosphorylation | T335 | -1.121 | _T(ph)TTPGPSLSQGVSVDEK_ | |
NBN | Phosphorylation | S341 | 3.085 | _TTTPGPS(ph)LSQGVSVDEK_ | |
NBN | Phosphorylation | S343 | 3.710 | 3.629 | _TTTPGPSLS(ph)QGVSVDEK_ |
NBN | Phosphorylation | S397 | 2.719 | 1.458 | _MLS(ph)QDAPTVK_ |
NBN | Phosphorylation | S432 | -0.192 | -0.395 | _IPNYQLS(ph)PTK_ |
NBN | Phosphorylation | T434 | -0.188 | -0.683 | _IPNYQLSPT(ph)KLPSINK_ |
NBN | Phosphorylation | S615 | 1.985 | 4.691 | _IS(ph)QENEIGKK_ |
POLD1 | Ubiquitylation | K414 | -1.315 | _AQTLK(gl)VQTFPFLGR_ | |
POLD1 | Ubiquitylation | K439 | -1.108 | _DSSFQSK(gl)QTGRR_ | |
POLD1 | Ubiquitylation | K447 | -1.286 | _DTK(gl)VVSMVGR_ | |
POLD1 | Ubiquitylation | K554 | -0.798 | _GQQVK(gl)VVSQLLR_ | |
POLD1 | Ubiquitylation | K674 | -1.082 | -1.843 | _TPTGDEFVK(gl)TSVR_ |
POLD1 | Ubiquitylation | K758 | -0.638 | _TK(gl)QLVESK_ | |
POLD1 | Ubiquitylation | K853 | -0.080 | -1.776 | _MDCK(gl)GLEAVR_ |
POLD1 | Ubiquitylation | K911 | -0.089 | -0.915 | _IDISQLVITK(gl)ELTR_ |
POLD1 | Ubiquitylation | K923 | -2.496 | _AASDYAGK(gl)QAHVELAER_ | |
POLD1 | Ubiquitylation | K1033 | 0.475 | -0.930 | _VGGLLAFAK(gl)R_ |
POLD1 | Ubiquitylation | K1065 | -0.208 | _ESELYQK(gl)EVSHLNALEER_ | |
POLD2 | Phosphorylation | S15 | -1.104 | _AHTLLS(ph)PPSANNATFAR_ | |
POLD2 | Ubiquitylation | K81 | -0.936 | _AQQHWGSGVGVKK(gl)_ | |
POLD2 | Ubiquitylation | K145 | 0.215 | _LK(gl)GTIDVSK_ | |
POLD2 | Ubiquitylation | K267 | -0.443 | -0.428 | _K(gl)TQAASVEAVK_ |
POLD3 | Phosphorylation | S307 | 0.831 | 0.828 | _VALS(ph)DDETKETENMR_ |
RAD50 | Ubiquitylation | K62 | -1.069 | _YICTGDFPPGTK(gl)GNTFVHDPK_ | |
RAD50 | Phosphorylation | S635 | 2.474 | 3.050 | _LFDVCGS(ph)QDFESDLDR_ |
RAD50 | Ubiquitylation | K753 | 0.394 | 0.397 | _NK(gl)LQNVNR_ |
RAD50 | Ubiquitylation | K933 | 0.397 | _FQQEKEELINKK(gl)_ | |
RAD50 | Ubiquitylation | K1068 | 0.098 | _LEENIDNIK(gl)R_ | |
RAD50 | Ubiquitylation | K1178 | -0.548 | _SDADENVSASDK(gl)RR_ | |
RAD50 | Ubiquitylation | K1285 | 2.195 | _SEYVEK(gl)FYR_ | |
RAD51 | Ubiquitylation | K64 | -1.228 | _KELINIK(gl)GISEAK_ | |
RAD51B | Ubiquitylation | K71 | -0.262 | _MQTAYGIK(gl)AQR_ | |
RAD51C | Phosphorylation | S20 | -0.880 | -0.922 | _DLVSFPLS(ph)PAVR_ |
RAD51C | Ubiquitylation | K72 | -1.746 | -0.333 | _ECLTNK(gl)PR_ |
RAD51C | Ubiquitylation | K328 | -0.364 | _LATLYK(gl)SPSQK_ | |
RAD54B | Phosphorylation | S14 | -0.406 | _SAAPSQLQGNS(ph)FK_ | |
RPA1 | Ubiquitylation | K163 | 2.827 | 4.085 | _AYGASK(gl)TFGK_ |
RPA1 | Ubiquitylation | K167 | 3.009 | 3.243 | _TFGK(gl)AAGPSLSHTSGGTQSK_ |
RPA1 | Ubiquitylation | K183 | 0.925 | _AAGPSLSHTSGGTQSK(gl)VVPIASLTPYQSK_ | |
RPA1 | Ubiquitylation | K263 | -1.803 | _GTLK(gl)IANK_ | |
RPA1 | Ubiquitylation | K267 | 2.751 | _IANK(gl)QFTAVK_ | |
RPA1 | Ubiquitylation | K331 | 3.112 | 4.066 | _SYEDATK(gl)ITVR_ |
RPA1 | Ubiquitylation | K410 | 2.458 | _SLSVLSSSTIIANPDIPEAYK(gl)LR_ | |
RPA1 | Ubiquitylation | K489 | 0.465 | 2.335 | _K(gl)VIDQQNGLYR_ |
RPA1 | Ubiquitylation | K588 | -0.055 | _IK(gl)ATVMDVKPVDYR_ | |
RPA1 | Ubiquitylation | K595 | 1.201 | _ATVMDVK(gl)PVDYR_ | |
RPA2 | Ubiquitylation | K85 | 0.693 | _HAEK(gl)APTNIVYK_ | |
RPA2 | Ubiquitylation | K235 | 1.339 | _NQLK(gl)HMSVSSIK_ | |
RPA3 | Ubiquitylation | K33 | 0.794 | _LEK(gl)IHPTGK_ | |
RPA3 | Ubiquitylation | K39 | 1.508 | 1.875 | _IHPTGK(gl)MFILSDGEGK_ |
SHFM1 | Ubiquitylation | K66 | 0.280 | _HGYK(gl)METS_ | |
SSBP1 | Ubiquitylation | K103 | 0.616 | _DVAYQYVK(gl)K_ | |
SSBP1 | Ubiquitylation | K104 | 0.616 | _DVAYQYVK(gl)K_ | |
XRCC3 | Ubiquitylation | K17 | -1.225 | _IIAAIK(gl)K_ | |
XRCC3 | Ubiquitylation | K36 | -0.644 | _EVLHFSGPDLK(gl)R_ | |
XRCC3 | Ubiquitylation | K72 | -0.839 | _GSSILTALQLHQQK(gl)ER_ |
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