RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ATP2A2	3	2.760	-1.150		0.192	-0.474	0.081	0.297
TPM3	1	2.410	-1.030	-0.178	0.366	-0.380	0.330	-1.062
TPM3	1	2.410	-1.030				-1.315
TTN	1	2.130	-1.190		0.133	0.277	0.244	0.213
LMNA	1	0.760	-0.400	1.025	-0.121	0.091	1.281	0.818
CACNB2	1	1.170	-1.170
DMD	1	0.960	-0.560				0.854	0.214
CACNA2D2	0	-1.100	0.810				-0.479	0.445
ITGA6	0	-0.530	0.420	-0.133			-0.561	-0.048
MYH7	0
TGFB1	0	-0.550	1.050
PRKAG2	0	1.300	-0.990	0.278			-0.667
PRKAB1	0	0.640	-1.180
ITGB6	0	-0.450	0.870				1.047	0.718
ITGA4	0	-0.620	0.820
TGFB3	0	0.900	-0.540
PRKAA1	0	0.910	0.060
ITGAV	0			-0.297			-0.090	0.262
TPM1	0	0.280	-0.190
ITGB1	0	0.390	-0.650				0.101	-0.036
CACNA2D1	0	-0.440	1.350				-0.479	0.445
ACTC1	0	0.220	-0.730		-0.189	0.025	-0.002	-0.165
ACTC1	0	0.220	-0.730	0.157
MYL3	0	-0.170	0.260
ITGA5	0	0.320	-0.520				0.858	0.617
PRKAA2	0	-0.030	-0.350
PRKAA2	0	-0.030	-0.350
SGCB	0	-0.300	0.500
ITGA2	0	-0.370	0.660				0.847	0.435
TPM4	0	1.200	0.010	-0.178	0.366	-0.380	0.330	-1.062
DAG1	0	0.210	-0.400
PRKAG1	0	0.400	-0.420	0.278			-0.667
LAMA2	0	1.640	-0.040
LAMA2	0	1.640	-0.040			-0.260
MYH6	0	-0.350	1.110
MYH6	0	-0.240	-0.750
ITGA1	0	-0.750	1.480				0.650	0.069

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATP2A2	Ubiquitylation	K169	2.444	3.235	_LTSIK(gl)STTLR_
ATP2A2	Ubiquitylation	K436		2.681	_GVYEK(gl)VGEATETALTCLVEK_
ATP2A2	Ubiquitylation	K460	0.597	2.302	_MNVFDTELK(gl)GLSK_
ATP2A2	Ubiquitylation	K464	1.160	3.034	_GLSK(gl)IER_
ATP2A2	Ubiquitylation	K476	1.817	3.302	_ANACNSVIK(gl)QLMK_
ATP2A2	Ubiquitylation	K480		2.106	_ANACNSVIKQLMK(gl)_
ATP2A2	Ubiquitylation	K492	0.229		_K(gl)SMSVYCTPNKPSR_
ATP2A2	Ubiquitylation	K502	-0.998	1.220	_SMSVYCTPNK(gl)PSR_
ATP2A2	Ubiquitylation	K510	1.498	2.485	_TSMSK(gl)MFVK_
ATP2A2	Ubiquitylation	K514	1.598	2.466	_MFVK(gl)GAPEGVIDR_
ATP2A2	Ubiquitylation	K533	1.659	2.743	_VGSTK(gl)VPMTSGVK_
ATP2A2	Ubiquitylation	K541		2.787	_VPMTSGVK(gl)QK_
ATP2A2	Ubiquitylation	K543	1.447	3.874	_QK(gl)IMSVIR_
ATP2A2	Ubiquitylation	K611	5.174	4.269	_IEVASSVK(gl)LCR_
ATP2A2	Ubiquitylation	K628	0.545	2.714	_VIMITGDNK(gl)GTAVAICR_
ATP2A2	Ubiquitylation	K650	1.861	2.614	_IGIFGQDEDVTSK(gl)AFTGR_
ATP2A2	Phosphorylation	S663	0.605	0.621	_EFDELNPS(ph)AQR_
ATP2A2	Ubiquitylation	K712		2.111	_K(gl)AEIGIAMGSGTAVAK_
ATP2A2	Ubiquitylation	K757	2.081	3.431	_AIYNNMK(gl)QFIR_
ATP2A2	Ubiquitylation	K995	-1.164	1.549	_NYLEPGK(gl)ECVQPATK_
CACNB2	Phosphorylation	S426	2.503		_S(ph)ASQAEEEPSVEPVK_
CACNB2	Phosphorylation	S428	1.622	0.834	_SAS(ph)QAEEEPSVEPVK_
DAG1	Ubiquitylation	K793		0.843	_LTLEDQATFIK(gl)K_
DAG1	Ubiquitylation	K794	0.899		_LTLEDQATFIKK(gl)_
DAG1	Ubiquitylation	K881	-0.342		_GSRPK(gl)NMTPYR_
DMD	Ubiquitylation	K3317	-0.200	-0.978	_CNICK(gl)ECPIIGFR_
DMD	Phosphorylation	S3623	2.940	0.225	_SDS(ph)SQPMLLR_
ITGA4	Phosphorylation	S1021	-0.095	1.014	_RDS(ph)WSYINSK_
ITGA5	Phosphorylation	S127	0.200	0.067	_LLESSLSS(ph)SEGEEPVEYK_
ITGA5	Phosphorylation	S128	-0.087		_LLESSLSSS(ph)EGEEPVEYK_
ITGA6	Ubiquitylation	K1116	0.715		_YIDNLEK(gl)K_
ITGA6	Ubiquitylation	K1117		1.453	_YIDNLEKK(gl)_
ITGAV	Ubiquitylation	K233		0.373	_YDPNVYSIK(gl)YNNQLATR_
ITGAV	Ubiquitylation	K360		0.294	_ASGDFQTTK(gl)LNGFEVFAR_
ITGAV	Ubiquitylation	K923		0.636	_GK(gl)SAILYVK_
ITGB1	Ubiquitylation	K774	0.402		_MNAK(gl)WDTGENPIYK_
ITGB1	Ubiquitylation	K784	-0.172	0.350	_WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1	Ubiquitylation	K794	0.755	0.604	_SAVTTVVNPK(gl)YEGK_
LAMA2	Ubiquitylation	K2038	-0.340		_LQAVK(gl)DKAR_
LAMA2	Ubiquitylation	K2040	-0.340		_LQAVK(gl)DKAR_
LMNA	Phosphorylation	T19		-1.262	_SGAQASST(ph)PLS(ph)PTR_
LMNA	Phosphorylation	S22	-0.433	0.377	_SGAQASST(ph)PLS(ph)PTR_
LMNA	Ubiquitylation	K32	0.054		_LQEK(gl)EDLQELNDR_
LMNA	Ubiquitylation	K78	-0.306		_EVSGIK(gl)AAYEAELGDAR_
LMNA	Ubiquitylation	K97	0.499	-0.167	_TLDSVAK(gl)ER_
LMNA	Ubiquitylation	K108	0.586		_LQLELSK(gl)VR_
LMNA	Ubiquitylation	K114	0.753		_VREEFK(gl)ELK_
LMNA	Ubiquitylation	K117	0.571		_VREEFKELK(gl)AR_
LMNA	Ubiquitylation	K122	0.401		_NTK(gl)KEGDLIAAQAR_
LMNA	Ubiquitylation	K123	0.401		_NTK(gl)KEGDLIAAQAR_
LMNA	Ubiquitylation	K135	0.856	1.129	_LK(gl)DLEALLNSK_
LMNA	Ubiquitylation	K155	-0.218	0.375	_EAALSTALSEK(gl)R_
LMNA	Ubiquitylation	K171	0.656	0.450	_GQVAK(gl)LEAALGEAKK_
LMNA	Ubiquitylation	K180	0.977	0.753	_LEAALGEAK(gl)K_
LMNA	Ubiquitylation	K181	0.458	0.679	_K(gl)QLQDEMLR_
LMNA	Ubiquitylation	K219	0.784	0.456	_NIYSEELRETK(gl)R_
LMNA	Ubiquitylation	K233	0.194	1.930	_LVEIDNGK(gl)QREFESR_
LMNA	Ubiquitylation	K261	0.576		_AQHEDQVEQYKK(gl)ELEK_
LMNA	Ubiquitylation	K265	0.532	0.714	_ELEK(gl)TYSAK_
LMNA	Ubiquitylation	K270	0.362	0.777	_TYSAK(gl)LDNAR_
LMNA	Ubiquitylation	K311	0.853	0.977	_IDSLSAQLSQLQK(gl)QLAAK_
LMNA	Ubiquitylation	K378	-0.030	0.701	_K(gl)LLEGEEER_
LMNA	Phosphorylation	S390	-0.020	-0.112	_LRLS(ph)PSPTSQR_
LMNA	Phosphorylation	S392	-0.062	-0.026	_LSPS(ph)PTSQR_
LMNA	Phosphorylation	S403		0.641	_GRAS(ph)SHSSQTQGGGSVTK_
LMNA	Phosphorylation	S458		0.520	_NKS(ph)NEDQSMGNWQIK_
LMNA	Phosphorylation	S632	0.730		_SVGGS(ph)GGGSFGDNLVTR_
LMNA	Phosphorylation	S636	0.537	1.498	_SVGGSGGGS(ph)FGDNLVTR_
MYH6	Ubiquitylation	K1446	-1.408	-0.411	_SNAAAAALDK(gl)K_
MYH6	Ubiquitylation	K1447	-1.408	-0.411	_SNAAAAALDK(gl)K_
MYH7	Ubiquitylation	K1446	-1.408	-0.411	_SNAAAAALDK(gl)K_
MYH7	Ubiquitylation	K1447	-1.408	-0.411	_SNAAAAALDK(gl)K_
MYL3	Ubiquitylation	K142		1.113	_VFDK(gl)EGNGTVMGAELR_
PRKAA1	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA1	Ubiquitylation	K396		-0.419	_HTLDELNPQK(gl)SK_
PRKAA1	Ubiquitylation	K485	-1.326	-1.554	_SIDDEITEAK(gl)SGTATPQR_
PRKAA2	Ubiquitylation	K271		-0.536	_ATIK(gl)DIR_
PRKAA2	Phosphorylation	S377	-0.020		_MPPLIADS(ph)PK_
PRKAB1	Phosphorylation	S108	-0.357	0.129	_S(ph)HNNFVAILDLPEGEHQYK_
PRKAG1	Ubiquitylation	K78		-0.588	_AAPLWDSK(gl)K_
PRKAG1	Ubiquitylation	K79		-0.588	_AAPLWDSK(gl)K_
PRKAG1	Ubiquitylation	K243	-0.525	-0.505	_VSALPVVDEK(gl)GR_
PRKAG2	Ubiquitylation	K78		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K79		-0.588	_AAPLWDSK(gl)K_
PRKAG2	Ubiquitylation	K243	-0.525	-0.505	_VSALPVVDEK(gl)GR_
SGCB	Ubiquitylation	K202		0.493	_SLNVQK(gl)ASTER_
SGCB	Ubiquitylation	K219		0.060	_ITSNATSDLNIK(gl)VDGR_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TPM1	Ubiquitylation	K30	-1.537		_AEQAEADKK(gl)AAEDR_
TPM3	Ubiquitylation	K11	0.368	1.125	_(ac)AGITTIEAVK(gl)R_
TPM3	Ubiquitylation	K116	-0.031		_MELQEIQLKEAK(gl)_
TPM3	Ubiquitylation	K223	0.612		_TIDDLEDK(gl)LK_
TPM3	Ubiquitylation	K225	0.564		_TIDDLEDKLK(gl)CTK_
TPM3	Ubiquitylation	K228	1.242	0.668	_CTK(gl)EEHLCTQR_
TPM4	Ubiquitylation	K11	0.368	1.125	_(ac)AGITTIEAVK(gl)R_
TPM4	Ubiquitylation	K116	-0.031		_MELQEIQLKEAK(gl)_
TPM4	Ubiquitylation	K223	0.612		_TIDDLEDK(gl)LK_
TPM4	Ubiquitylation	K225	0.564		_TIDDLEDKLK(gl)CTK_
TPM4	Ubiquitylation	K228	1.242	0.668	_CTK(gl)EEHLCTQR_
TTN	Ubiquitylation	K27327	-0.283	0.183	_AGEVLK(gl)INADIAGR_