RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SETD2	3	-1.690	2.960	1.619		1.725	-0.978	0.379
FNBP4	2	-0.750	0.870				-0.226	0.423
TCERG1	2	-2.140	3.750	0.359	-0.509	-0.595	-0.336	-0.102
ITCH	1	1.000	-0.610	-0.346			0.023	0.613
WAC	1	1.080	-0.710				-2.718	0.290
WWP1	1	-1.400	1.340
WWP1	1	0.850	-1.030
WWP1	1	-1.400	1.340	-0.346			0.023	0.613
WWP1	1	0.850	-1.030	-0.346			0.023	0.613
CMTR1	1	2.420	-0.720	-3.133	0.766	0.758	-0.009	0.220
BAG3	1	0.180	-0.820
APBB2	1	0.800	-0.750
TCERG1L	1	-0.360	0.330	0.359	-0.509	-0.595	-0.336	-0.102
WWOX	1	2.850	-1.200
DMD	1	0.960	-0.560				0.854	0.214
NEDD4L	0	-0.050	-0.110
PLEKHA5	0	0.490	-0.530				0.253	0.609
NEDD4	0	-1.320	1.730
MAGI3	0	1.510	-0.840
MAGI3	0	1.510	-0.840				0.696	0.967
PCIF1	0	-1.320	1.980
CEP164	0
PRPF40B	0	-1.060	1.470
PIN1	0	-0.060	-0.440		-1.204	-0.594
DGCR8	0	0.120	-0.650
YAP1	0	1.010	-0.370
HECW2	0	0.150	0.240
USP8	0	0.830	-0.320
IQGAP1	0	-0.420	0.300		0.641	-0.402
IQGAP1	0	-0.420	0.300	1.363			0.406	0.007
IQGAP2	0	0.570	-0.600	-0.934	-0.237	-0.246	0.574	0.202
SHPRH	0	1.120	-0.380		-0.393	0.380	1.076	0.739
ARHGAP39	0
MAGI1	0	-0.840	1.740				0.696	0.967
SAV1	0	1.110	-0.700
UTRN	0	0.740	-0.670	-0.497			0.668	0.380
ARHGAP12	0	-0.240	-0.040
STXBP4	0	0.810	0.110
PLEKHA7	0	-0.830	0.880				0.518	0.204
IQGAP3	0	1.720	-1.070				0.165	0.274
PRPF40A	0	0.270	-0.400	1.069	0.440	0.924	-0.231	0.314

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
APBB2	Phosphorylation	S123	1.522	1.336	_NLS(ph)PTAVINITSEK_
ARHGAP12	Phosphorylation	T174		-0.246	_T(ph)RSFGHFPGPEFLDVEK_
ARHGAP12	Phosphorylation	S176	-0.544	-0.246	_S(ph)FGHFPGPEFLDVEK_
ARHGAP12	Phosphorylation	T231		-0.622	_ATT(ph)PPNQGRPDS(ph)PVYANLQELK_
ARHGAP12	Phosphorylation	S240		-0.622	_ATT(ph)PPNQGRPDS(ph)PVYANLQELK_
ARHGAP39	Phosphorylation	S604	0.819	1.010	_AFS(ph)EDEALAQQENR_
BAG3	Phosphorylation	S173	-0.549	-0.580	_SQS(ph)PAASDCSSSSSSASLPSSGR_
BAG3	Phosphorylation	S194	-0.402	-0.523	_S(ph)SLGSHQLPR_
BAG3	Phosphorylation	S195	0.244	-0.933	_SS(ph)LGSHQLPR_
BAG3	Phosphorylation	S289	4.691	-1.292	_SSTPLHS(ph)PSPIR_
BAG3	Phosphorylation	S291	0.973	-1.061	_SSTPLHSPS(ph)PIR_
BAG3	Phosphorylation	S377	-2.611	-2.836	_VPPAPVPCPPPS(ph)PGPSAVPSSPK_
BAG3	Phosphorylation	S381		-1.826	_VPPAPVPCPPPSPGPS(ph)AVPS(ph)SPK_
BAG3	Phosphorylation	S385	-3.389	-1.522	_VPPAPVPCPPPS(ph)PGPSAVPS(ph)SPK_
BAG3	Phosphorylation	S386	-3.389	-3.269	_VPPAPVPCPPPS(ph)PGPSAVPSS(ph)PK_
CEP164	Phosphorylation	S246	-1.251	-0.145	_GLEERLS(ph)PPLPHEER_
CMTR1	Phosphorylation	S28	1.170		_VAELALSLS(ph)STSDDEPPSSVSHGAK_
CMTR1	Ubiquitylation	K260	-0.165		_DSYGK(gl)PLVK_
CMTR1	Ubiquitylation	K447		-0.022	_YVVCK(gl)GLK_
DGCR8	Phosphorylation	S8	-0.636	-0.088	_(ac)METDESPS(ph)PLPCGPAGEAVMESR_
DGCR8	Phosphorylation	S95	-0.534	-0.986	_LLIDPNCSGHS(ph)PR_
DGCR8	Phosphorylation	S153		0.657	_AECGLLLS(ph)PVSGDVHACPFGGSVGDGVGIGGESADKKDEENELDQEK_
DGCR8	Phosphorylation	S377	-0.073	-0.076	_EQSSDLTPSGDVS(ph)PVKPLSR_
DGCR8	Phosphorylation	S383	0.779	-0.513	_DNEEREQSSDLTPSGDVSPVKPLS(ph)R_
DMD	Ubiquitylation	K3317	-0.200	-0.978	_CNICK(gl)ECPIIGFR_
DMD	Phosphorylation	S3623	2.940	0.225	_SDS(ph)SQPMLLR_
FNBP4	Phosphorylation	S18	-0.506	-0.451	_RPILQLS(ph)PPGPR_
FNBP4	Phosphorylation	S431		0.477	_ALEEGDGSVSGS(ph)SPR_
FNBP4	Phosphorylation	S432	0.717	0.767	_ALEEGDGSVSGSS(ph)PR_
FNBP4	Phosphorylation	S499	-1.167	0.351	_IDENS(ph)DKEMEVEESPEK_
FNBP4	Phosphorylation	T516	1.723	1.590	_VQT(ph)TPKVEEEQDLK_
FNBP4	Phosphorylation	T517	1.553	1.505	_VQTT(ph)PKVEEEQDLK_
HECW2	Phosphorylation	S48	0.133	0.276	_ANS(ph)DTDLVTSESR_
IQGAP1	Ubiquitylation	K953	0.650		_NKEQLSDMMMINK(gl)QK_
IQGAP1	Ubiquitylation	K959	0.713	0.074	_GGLK(gl)ALSK_
IQGAP1	Ubiquitylation	K1389	0.638	1.119	_TILLNTK(gl)R_
IQGAP1	Ubiquitylation	K1442	0.488		_SK(gl)SVKEDSNLTLQEK_
IQGAP1	Phosphorylation	S1443	0.392	0.273	_SKS(ph)VKEDSNLTLQEK_
IQGAP1	Ubiquitylation	K1445	0.863		_SVK(gl)EDSNLTLQEK_
IQGAP2	Phosphorylation	S16	0.126	0.190	_YGS(ph)IVDDER_
IQGAP2	Ubiquitylation	K837		-0.165	_IGLLVK(gl)NR_
IQGAP3	Ubiquitylation	K661		0.344	_ALESAMAKK(gl)_
IQGAP3	Phosphorylation	T1426		-0.517	_SLT(ph)AHSLLPLAEK_
ITCH	Ubiquitylation	K66	-0.890		_WK(gl)QPLTVIVTPVSK_
ITCH	Ubiquitylation	K350	0.049	0.396	_VYYVDHVEK(gl)R_
ITCH	Ubiquitylation	K446	-1.514	-1.539	_EFDPLGPLPPGWEK(gl)R_
ITCH	Ubiquitylation	K478	-1.265		_SQGQLNEK(gl)PLPEGWEMR_
ITCH	Ubiquitylation	K513	-0.564	1.593	_TGK(gl)SALDNGPQIAYVR_
ITCH	Ubiquitylation	K861	-0.810	0.596	_VGK(gl)ENWLPR_
MAGI3	Phosphorylation	S722		-0.403	_S(ph)GSPKLDPSEVYLK_
MAGI3	Phosphorylation	S724		-0.403	_SGS(ph)PKLDPSEVYLK_
NEDD4	Phosphorylation	Y751		-0.924	_RGSLQAY(ph)TFEEQPTLPVLLPTSSGLPPGWEEK_
NEDD4	Ubiquitylation	K874	0.127		_LK(gl)IPAHLR_
NEDD4	Ubiquitylation	K882	-0.919	0.114	_GK(gl)TSLDTSNDLGPLPPGWEER_
NEDD4L	Ubiquitylation	K149	-0.001	0.036	_LK(gl)MAYMPK_
NEDD4L	Phosphorylation	T302	0.166	0.120	_T(ph)SPQELSEELSR_
NEDD4L	Phosphorylation	S303	0.166	0.120	_T(ph)SPQELSEELSR_
NEDD4L	Phosphorylation	S448	0.067	-0.137	_SLS(ph)SPTVTLSAPLEGAK_
NEDD4L	Phosphorylation	S449	-0.460	-0.435	_SLSS(ph)PTVTLSAPLEGAK_
NEDD4L	Ubiquitylation	K462	-0.635	-0.011	_SLSSPTVTLSAPLEGAK(gl)DSPVRR_
NEDD4L	Ubiquitylation	K471	-0.787		_AVK(gl)DTLSNPQSPQPSPYNSPKPQHK_
NEDD4L	Ubiquitylation	K531		0.704	_LK(gl)FPVHMR_
NEDD4L	Ubiquitylation	K539	-1.106	-1.175	_SK(gl)TSLNPNDLGPLPPGWEER_
NEDD4L	Ubiquitylation	K639	0.649	0.864	_IMSVK(gl)RPDVLK_
PCIF1	Phosphorylation	S14	-1.421	-0.585	_EEAS(ph)LLSHSPGTSNQSQPCSPKPIR_
PCIF1	Phosphorylation	S30	-1.136	-1.483	_EEASLLSHSPGTSNQSQPCS(ph)PKPIR_
PCIF1	Phosphorylation	S143	-0.961	-1.475	_IEIPVTPTGQSVPS(ph)SPSIPGTPTLK_
PCIF1	Phosphorylation	S144		-1.377	_IEIPVTPTGQSVPSS(ph)PSIPGTPTLK_
PCIF1	Phosphorylation	S146	-0.859	-1.128	_IEIPVTPTGQSVPSSPS(ph)IPGTPTLK_
PIN1	Ubiquitylation	K13	-0.216	-0.516	_(ac)ADEEKLPPGWEK(gl)R_
PIN1	Ubiquitylation	K117	0.117		_SGEEDFESLASQFSDCSSAK(gl)AR_
PLEKHA5	Phosphorylation	S416	0.574	0.822	_TNS(ph)MQQLEQWIK_
PLEKHA5	Phosphorylation	S1021	0.302	0.454	_AKS(ph)PTPESSTIASYVTLR_
PLEKHA5	Phosphorylation	T1023	0.244	0.270	_AKSPT(ph)PESSTIASYVTLR_
PLEKHA7	Phosphorylation	S117	0.451		_NQRPS(ph)SM(ox)VSETSTAGTASTLEAKPGPK_
PLEKHA7	Ubiquitylation	K496	-0.911		_NLPSDYK(gl)YAQDR_
PLEKHA7	Phosphorylation	S536	-1.390	-1.117	_HGS(ph)PTAPICLGSPEFTDQGR_
PLEKHA7	Phosphorylation	T538	0.171	-0.332	_HGSPT(ph)APICLGSPEFTDQGR_
PLEKHA7	Phosphorylation	S612		0.302	_SVDISLGDS(ph)PRR_
PLEKHA7	Ubiquitylation	K661	-0.029	-0.111	_SADDTYLQLKK(gl)_
PLEKHA7	Ubiquitylation	K669	-0.497		_DLEYLDLK(gl)MTGR_
PLEKHA7	Ubiquitylation	K745	-0.782	-0.657	_DQPQHLEK(gl)IAYQQK_
PLEKHA7	Phosphorylation	S903	-0.219	-0.328	_VTS(ph)PLQSPTK_
PLEKHA7	Phosphorylation	S907	-2.776	-0.039	_VTS(ph)PLQS(ph)PTK_
PLEKHA7	Phosphorylation	S986	-0.400		_SYVS(ph)EPELATLSGDM(ox)AQPSLGLVGPESR_
PRPF40A	Ubiquitylation	K150	0.396		_SMWTEHK(gl)SPDGR_
PRPF40A	Ubiquitylation	K196	0.465		_SDSGK(gl)PYYYNSQTK_
PRPF40A	Phosphorylation	S888	0.125	0.348	_SDSPES(ph)DAEREK_
PRPF40A	Phosphorylation	S938	-0.360	0.363	_DSGNWDTSGSELS(ph)EGELEKR_
PRPF40B	Phosphorylation	S764	0.312	0.245	_GS(ph)PSSHLLGADHGLR_
PRPF40B	Phosphorylation	S832	0.585	0.658	_ELQQAELPNRS(ph)PGFGIK_
SAV1	Phosphorylation	S27		1.144	_KETS(ph)PLLR_
SETD2	Phosphorylation	S130	-0.443		_M(ox)EIGDTLSTAEES(ph)SPPK_
SETD2	Phosphorylation	S131	-0.001	-0.163	_M(ox)EIGDTLSTAEESS(ph)PPK_
SETD2	Phosphorylation	S624	0.374	0.432	_LNDS(ph)PTLKK_
SETD2	Phosphorylation	S708	0.398		_TDAVLM(ox)TSDDSVTGSELS(ph)PLVK_
SETD2	Phosphorylation	S742	-1.167	-1.779	_S(ph)ESPFRETEPLVSPHQDK_
SETD2	Phosphorylation	S744	-0.557		_SES(ph)PFRETEPLVSPHQDK_
SETD2	Phosphorylation	T1083		0.552	_NSTLPMEET(ph)SPCSSR_
SETD2	Phosphorylation	S1084		-0.102	_NSTLPMEETS(ph)PCSSR_
SETD2	Phosphorylation	T1872	-0.148	-1.034	_LSTEADTDT(ph)PKK_
SETD2	Phosphorylation	S1885		0.110	_IIS(ph)ENSMDSAISDATSELEGK_
SETD2	Phosphorylation	S1888	1.247	0.067	_IISENS(ph)M(ox)DSAISDATSELEGK_
SHPRH	Phosphorylation	S266		-1.118	_LHNSIIPDVLEEDEDDPES(ph)EPEGQDIDELYHFVK_
SHPRH	Ubiquitylation	K1062		-0.769	_LK(gl)TDSLQR_
SHPRH	Ubiquitylation	K1647	0.795		_MQAMLK(gl)TAER_
STXBP4	Phosphorylation	S6		0.972	_(ac)MNKNTS(ph)TVVSPS(ph)LLEK_
STXBP4	Ubiquitylation	K487		-0.179	_ELVK(gl)SVR_
TCERG1	Ubiquitylation	K146	0.859		_TPDGK(gl)VYYYNAR_
TCERG1	Ubiquitylation	K161	0.421		_ESAWTK(gl)PDGVK_
TCERG1	Ubiquitylation	K444	1.501		_TADGK(gl)TYYYNNR_
TCERG1	Ubiquitylation	K585		0.547	_GMEELK(gl)K_
TCERG1	Ubiquitylation	K586	0.949		_GMEELKK(gl)_
TCERG1	Ubiquitylation	K711	1.730		_KQVFDQYVK(gl)TR_
TCERG1	Ubiquitylation	K846	1.243		_QYIEK(gl)IAK_
TCERG1	Ubiquitylation	K992	0.951	0.162	_CIK(gl)FSSSDR_
TCERG1	Ubiquitylation	K1027	2.578	-2.051	_ETK(gl)FITYR_
TCERG1L	Ubiquitylation	K146	0.859		_TPDGK(gl)VYYYNAR_
TCERG1L	Ubiquitylation	K161	0.421		_ESAWTK(gl)PDGVK_
TCERG1L	Ubiquitylation	K444	1.501		_TADGK(gl)TYYYNNR_
TCERG1L	Ubiquitylation	K585		0.547	_GMEELK(gl)K_
TCERG1L	Ubiquitylation	K586	0.949		_GMEELKK(gl)_
TCERG1L	Ubiquitylation	K711	1.730		_KQVFDQYVK(gl)TR_
TCERG1L	Ubiquitylation	K846	1.243		_QYIEK(gl)IAK_
TCERG1L	Ubiquitylation	K992	0.951	0.162	_CIK(gl)FSSSDR_
TCERG1L	Ubiquitylation	K1027	2.578	-2.051	_ETK(gl)FITYR_
USP8	Phosphorylation	S392	-0.015	0.284	_SDVS(ph)PIIQPVPSIK_
USP8	Phosphorylation	T577	-0.048	0.069	_RCPT(ph)PEIQKK_
USP8	Phosphorylation	S716	0.750	0.023	_S(ph)YSSPDITQAIQEEEKR_
USP8	Phosphorylation	S718	0.338	0.273	_SYS(ph)SPDITQAIQEEEKR_
UTRN	Ubiquitylation	K2645	-0.147		_NLQSK(gl)TELTPEER_
UTRN	Ubiquitylation	K2793	0.536		_LK(gl)QLQEAHR_
UTRN	Ubiquitylation	K3065	0.998	0.577	_VAAAETAK(gl)HQAK_
UTRN	Ubiquitylation	K3074	0.216		_CNICK(gl)ECPIVGFR_
UTRN	Phosphorylation	S3297	-0.222		_GLPVGS(ph)PPESIISPHHTSEDSELIAEAK_
WAC	Phosphorylation	S53	0.433	0.072	_MRDAGDPS(ph)PPNK_
WAC	Phosphorylation	S64	0.472	0.441	_SDS(ph)PENKYSDSTGHSK_
WAC	Phosphorylation	T293	2.401	1.442	_LPT(ph)PTSSVPAQK_
WAC	Phosphorylation	S511	1.112	0.116	_QQGHEPVS(ph)PR_
WWOX	Ubiquitylation	K100	-1.048	-0.703	_LAFTVDDNPTK(gl)PTTR_
WWP1	Ubiquitylation	K66	-0.890		_WK(gl)QPLTVIVTPVSK_
WWP1	Ubiquitylation	K328	-0.364	0.487	_SSSAFEAAK(gl)SR_
WWP1	Ubiquitylation	K350	0.049	0.396	_VYYVDHVEK(gl)R_
WWP1	Ubiquitylation	K446	-1.514	-1.539	_EFDPLGPLPPGWEK(gl)R_
WWP1	Ubiquitylation	K478	-1.265		_SQGQLNEK(gl)PLPEGWEMR_
WWP1	Ubiquitylation	K513	-0.564	1.593	_TGK(gl)SALDNGPQIAYVR_
WWP1	Ubiquitylation	K536	-1.895	1.126	_SSVTK(gl)GGPQIAYER_
WWP1	Ubiquitylation	K861	-0.810	0.596	_VGK(gl)ENWLPR_
YAP1	Phosphorylation	S61	-0.064	0.017	_GDS(ph)ETDLEALFNAVMNPK_
YAP1	Phosphorylation	T63	-0.159	-0.257	_GDSET(ph)DLEALFNAVM(ox)NPK_
YAP1	Phosphorylation	T110		0.467	_QAST(ph)DAGTAGALTPQHVR_
YAP1	Phosphorylation	S127		-1.544	_AHS(ph)SPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLR_
YAP1	Phosphorylation	S131	-1.256	-1.096	_AHSSPAS(ph)LQLGAVSPGTLTPTGVVSGPAATPTAQHLR_
YAP1	Ubiquitylation	K315	-0.002		_LQQLQMEK(gl)ER_
YAP1	Ubiquitylation	K321	-1.043		_LK(gl)QQELLR_
YAP1	Ubiquitylation	K342	-0.589		_NINPSTANSPK(gl)CQELALR_
YAP1	Phosphorylation	S367		0.272	_SQLPTLEQDGGTQNPVSS(ph)PGMSQELR_
YAP1	Phosphorylation	S397	-0.200		_DES(ph)TDSGLSM(ox)SSYSVPR_