RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PBX2	2	-0.170	0.670	-0.186		-0.124
DICER1	1	-0.810	0.800	1.748			-0.207	-0.634
MSX2	1	-0.260	0.240
FBN2	1	1.100	-0.880
PSEN2	1	-1.820	3.280
MBNL1	1	1.270	-0.900					-5.302
SKI	1	-1.870	2.800		-1.139	-0.588
HOXA11	0	-0.050	0.240
DLX6	0	0.390	-0.840
DLX6	0	0.640	-0.810
DLX6	0	0.390	-0.840		-1.286	0.204
DLX6	0	0.640	-0.810		-1.286	0.204
LRP6	0	0.210	0.050
FGFR1	0	0.210	0.150
PSEN1	0	0.930	-1.110
SALL4	0	0.590	0.130	-0.080	0.063	0.213	0.247	0.009
BMP7	0
ACD	0	0.480	-0.150
DLX5	0	-0.590	0.650		-1.286	0.204
GLI3	0	-0.980	1.650
WNT5A	0
TWIST1	0	-0.640	1.150
HOXD13	0	1.230	-1.330		-0.027	0.427
HOXD13	0	1.230	-1.330					-0.993
ALDH1A2	0	-1.010	0.740
LEF1	0	-0.710	0.790	-0.741
WDR19	0	-0.150	-0.220
MSX1	0	0.420	-0.450
C2CD3	0	-0.390	-0.010
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
ALX1	0	0.810	-0.890
HOXC10	0	-1.330	1.990
PBX1	0	-0.600	0.280
PBX1	0	-0.600	0.280	-0.186		-0.124
PTCH1	0	0.630	-0.690
DYNC2H1	0	-1.530	1.820				-0.319	0.050
DYNC2H1	0	-1.530	1.820	0.313
SP9	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACD	Phosphorylation	S111		-0.135	_ELILGSETPSS(ph)PR_
ACD	Phosphorylation	S399	-0.567	-0.012	_SSS(ph)QPSPAICSAPATLTPR_
ACD	Phosphorylation	S407		0.499	_SSS(ph)QPSPAICS(ph)APATLTPR_
ACD	Phosphorylation	S425		1.015	_TPSS(ph)PLQSCTPSLSPR_
ALDH1A2	Ubiquitylation	K365		-1.744	_VVGSPFDPTTEQGPQIDK(gl)K_
ALDH1A2	Ubiquitylation	K366		-1.744	_VVGSPFDPTTEQGPQIDK(gl)K_
ALDH1A2	Ubiquitylation	K507		0.123	_EYSEVK(gl)TVTVK_
ALX1	Phosphorylation	T68	0.678	0.289	_T(ph)SPCQDSSVNYGITK_
ALX1	Phosphorylation	S69	0.678	0.484	_T(ph)SPCQDSSVNYGITK_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
C2CD3	Ubiquitylation	K86	-0.837		_DALQTEPK(gl)AVR_
C2CD3	Phosphorylation	S2111	-1.046	-1.043	_EGPS(ph)CPSPGPFCR_
C2CD3	Phosphorylation	S2114		-1.200	_EGPSCPS(ph)PGPFCR_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DLX5	Phosphorylation	S225		-0.821	_SGEIPSEQHPGAS(ph)AS(ph)PPCASPPVSAPASWDFGVPQR_
DLX5	Phosphorylation	S227		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DLX5	Phosphorylation	S232		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DLX6	Phosphorylation	S130	-1.478	-1.295	_S(ph)PALPPVWDVSASAK_
DLX6	Phosphorylation	S225		-0.821	_SGEIPSEQHPGAS(ph)AS(ph)PPCASPPVSAPASWDFGVPQR_
DLX6	Phosphorylation	S227		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DLX6	Phosphorylation	S232		-1.137	_SGEIPSEQHPGASAS(ph)PPCAS(ph)PPVSAPASWDFGVPQR_
DYNC2H1	Ubiquitylation	K158		0.457	_SDTNLTK(gl)LK_
DYNC2H1	Ubiquitylation	K398		-0.876	_IIAPAEQK(gl)IAGK_
DYNC2H1	Ubiquitylation	K1248		-0.579	_AADLK(gl)DLNSR_
DYNC2H1	Ubiquitylation	K2608		-1.364	_LNSTDLK(gl)DVIKK_
DYNC2H1	Ubiquitylation	K2613		-1.117	_LNSTDLKDVIKK(gl)_
FBN2	Ubiquitylation	K385		1.550	_MTK(gl)MQCCCEPGR_
FBN2	Ubiquitylation	K712	0.133	1.523	_STCYGGIKK(gl)_
FBN2	Ubiquitylation	K1582		0.690	_VGNCYLK(gl)FGPR_
FGFR1	Ubiquitylation	K510	1.047	-0.221	_VTK(gl)VAVK_
GLI3	Phosphorylation	S664	-0.582	-0.252	_S(ph)PGRPTQGALGEQQDLSNTTSK_
HOXA11	Ubiquitylation	K72		-0.905	_EYAIEPATK(gl)WHPR_
HOXA11	Phosphorylation	S84	0.313	0.946	_GNLAHCYS(ph)AEELVHR_
HOXC10	Phosphorylation	S226		0.358	_TEQSLAGPKGS(ph)PSESEKER_
HOXD13	Ubiquitylation	K335	0.431	0.162	_VQLK(gl)ELER_
LEF1	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
LRP6	Ubiquitylation	K1443		-0.221	_GK(gl)SMISSLSIMGGSSGPPYDR_
MBNL1	Ubiquitylation	K58		1.821	_VIACFDSLK(gl)GR_
MSX1	Phosphorylation	S154		0.148	_RLS(ph)PPACTLR_
MSX2	Phosphorylation	S3	-1.986	-1.774	_(ac)AS(ph)PSKGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S5	-1.986		_AS(ph)PS(ph)KGNDLFSPDEEGPAVVAGPGPGPGGAEGAAEER_
MSX2	Phosphorylation	S63		3.351	_EAS(ph)PLPAESASAGATLRPLLLSGHGAR_
MSX2	Phosphorylation	S91	-0.783	-0.727	_EAHS(ph)PGPLVKPFETASVK_
MSX2	Phosphorylation	S123		-0.062	_SENSEDGAAWMQEPGRYS(ph)PPPR_
PBX1	Ubiquitylation	K164		-0.541	_SK(gl)LAQIR_
PBX1	Ubiquitylation	K195	-1.614		_TRPISPK(gl)EIER_
PBX2	Ubiquitylation	K164		-0.541	_SK(gl)LAQIR_
PSEN1	Phosphorylation	S313		0.844	_VSKNS(ph)KYNAESTER_
PSEN1	Ubiquitylation	K314	0.016	0.414	_NSK(gl)YNAESTER_
PSEN1	Phosphorylation	S366	-0.340	0.055	_AAVQELSS(ph)SILAGEDPEER_
PSEN1	Phosphorylation	S367	0.005	0.066	_AAVQELSSS(ph)ILAGEDPEER_
PSEN2	Phosphorylation	S58	-0.112	-0.130	_TSLM(ox)SAES(ph)PTPR_
PTCH1	Ubiquitylation	K904		-0.390	_DKPIDISQLTK(gl)QR_
SALL4	Phosphorylation	S1119	-1.156	-1.235	_DTPTSHVPSGPLSSSATS(ph)PVLLPALPR_
SKI	Ubiquitylation	K294	-0.126	-0.054	_AYILLSQDYTGK(gl)EEQAR_
SKI	Ubiquitylation	K365	-0.244	-0.390	_TLAGSSNK(gl)SLGCVHPR_
SKI	Phosphorylation	S431		-0.475	_VVS(ph)SPPCAAAVSR_
SKI	Phosphorylation	S432	-0.742	-0.438	_VVSS(ph)PPCAAAVSR_
SKI	Phosphorylation	S480	-1.160	-1.491	_LTVDTPGAPETLAPVAAPEEDKDS(ph)EAEVEVESR_
SP9	Phosphorylation	T30		0.648	_IGNT(ph)SPLTTLPESSAFAK_
SP9	Phosphorylation	S31	1.039	0.462	_IGNTS(ph)PLTTLPESSAFAK_
SP9	Phosphorylation	S440	0.366	0.426	_SES(ph)PDLILHDSGVSAAR_
TWIST1	Ubiquitylation	K150		-0.176	_IQTLK(gl)LAAR_
WDR19	Ubiquitylation	K475		0.103	_LFPAVDDK(gl)CR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_