RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CUL3	2	2.600	-1.300	0.182	-0.454	0.077	-0.259	-0.135
HSPA8	2	-0.640	0.320	0.616	0.207	0.569	0.697	0.187
MAPK14	2	-0.160	-0.350
HSPA4	2	-0.080	0.630		1.166	-0.364
HSPA4	2	-0.080	0.630	0.518			1.282	-0.078
HSPA5	1	-0.670	0.310	-0.181	-0.208	0.339	-0.702	-0.192
ARHGEF2	1	-0.650	0.360	-0.121	-0.287	0.319	0.984	0.013
MED1	1	0.780	-0.520				-1.530	-0.219
SHROOM1	1	1.810	-0.700
SSH1	0	-0.780	1.560
ADD1	0	0.440	0.020		-0.881	-0.757	1.191	-0.072
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240
STK4	0	0.260	-0.240				-0.235	-0.851
RP2	0	-0.730	0.030					-0.477
GATA3	0	0.000	-0.660
SOX6	0	1.430	-0.800
CAP2	0	0.850	-0.440
HSPA9	0	-0.110	-0.790	0.452	0.066	-0.024	0.697	0.588
COL4A3BP	0	-0.460	0.000
ECT2	0	0.620	-0.960					-0.787
TFCP2L1	0	-1.120	0.880	0.684	0.006	0.158	1.331	0.870
HSPH1	0	-0.310	0.000		-0.157	0.289
HSPH1	0	-0.310	0.000	-0.169			0.737	0.256
TBCC	0	0.050	-0.080
HSPA2	0	-0.890	1.860	0.109
SMARCA4	0	-0.810	1.520	0.629	-0.158	0.141	0.337	0.333
CAP1	0	-0.450	1.100				0.499	-0.364
EPHB2	0	-0.630	0.780					0.221
EPHB2	0	-0.630	0.780
MAP7	0	-0.420	0.260					-0.651
MAP7	0	-0.420	0.260
SHROOM3	0	1.220	-0.790			-3.936
SS18	0	0.150	-0.700	-0.079	-1.091	0.600
EGFR	0	-0.580	0.520				0.513	0.090
SHROOM2	0	1.900	-1.500
HSPA13	0	1.140	-0.610				-0.221	-1.026
ATP2B2	0	1.540	-0.900				0.593	0.487
WDR19	0	-0.150	-0.220
MSX1	0	0.420	-0.450
HSPA4L	0	1.160	-0.820			-0.238	-0.953	0.657
BCL2	0	0.910	-0.740
HSPA6	0	0.130	-0.260		-0.018	0.333	0.022	0.090
HSPA6	0	0.130	-0.260	-0.061
HSPA14	0	0.000	-0.600	-0.947			-0.672	-0.061

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADD1	Phosphorylation	T11	-0.730	-0.576	_AAVVT(ph)SPPPTTAPHK_
ADD1	Phosphorylation	S12	-1.409	-0.665	_AAVVTS(ph)PPPTTAPHK_
ADD1	Phosphorylation	S64		0.260	_RVSMILQS(ph)PAFCEELESMIQEQFK_
ADD1	Ubiquitylation	K140		0.386	_GSDSIAYDK(gl)GEK_
ADD1	Ubiquitylation	K143	0.288	0.386	_GSDSIAYDKGEK(gl)_
ADD1	Phosphorylation	S353	-0.425	-0.286	_S(ph)RSPGSPVGEGTGSPPK_
ADD1	Phosphorylation	S355	-0.007	-0.345	_SRS(ph)PGSPVGEGTGSPPK_
ADD1	Phosphorylation	S358	-0.346	-0.241	_SPGS(ph)PVGEGTGSPPK_
ADD1	Phosphorylation	S366		-1.004	_SPGSPVGEGTGS(ph)PPKWQIGEQEFEALMR_
ADD1	Phosphorylation	T429	-0.303		_YSDVEVPASVTGYSFASDGDSGT(ph)CSPLR_
ADD1	Phosphorylation	S431	-0.176	-0.145	_KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR_
ADD1	Phosphorylation	S436	0.937	0.639	_KYSDVEVPASVTGYSFASDGDSGTCSPLRHS(ph)FQK_
ADD1	Phosphorylation	S483	-0.425	-1.128	_TSTS(ph)AVPNLFVPLNTNPK_
ADD1	Phosphorylation	S586	-0.125	1.117	_QKGS(ph)EENLDEAR_
ADD1	Phosphorylation	S726	0.518	0.668	_TPS(ph)FLKK_
ARHGEF2	Phosphorylation	S196	-0.074	0.190	_SVS(ph)TTNIAGHFNDESPLGLR_
ARHGEF2	Phosphorylation	S208		-1.192	_SVSTTNIAGHFNDES(ph)PLGLR_
ARHGEF2	Phosphorylation	S217	0.850		_ILS(ph)QSTDSLNMR_
ARHGEF2	Phosphorylation	S219	0.334	0.620	_ILSQS(ph)TDSLNMR_
ARHGEF2	Ubiquitylation	K397	-0.617		_LYK(gl)ELYAR_
ARHGEF2	Phosphorylation	S689	2.510	1.206	_SES(ph)LESPR_
ARHGEF2	Phosphorylation	S735		-0.212	_EPALPLEPDS(ph)GGNTSPGVTANGEAR_
ARHGEF2	Phosphorylation	T739		-0.489	_EPALPLEPDSGGNT(ph)SPGVTANGEAR_
ARHGEF2	Phosphorylation	S740	-0.461	-0.375	_EPALPLEPDSGGNTS(ph)PGVTANGEAR_
ARHGEF2	Phosphorylation	S930	-0.782	-1.060	_S(ph)LPAGDALYLSFNPPQPSR_
ARHGEF2	Phosphorylation	S976	0.649	0.809	_QELGS(ph)PEER_
ATP2B2	Ubiquitylation	K15	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Phosphorylation	S17	0.515	0.902	_NS(ph)LKEANHDGDFGITLAELR_
ATP2B2	Ubiquitylation	K19	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Ubiquitylation	K48	1.326		_K(gl)IQESYGDVYGICTK_
ATP2B2	Ubiquitylation	K62	0.733		_IQESYGDVYGICTK(gl)LK_
ATP2B2	Ubiquitylation	K64	0.642	0.801	_LK(gl)TSPNEGLSGNPADLER_
ATP2B2	Ubiquitylation	K193	-0.102	0.773	_IEQEQK(gl)FTVIR_
ATP2B2	Ubiquitylation	K365		0.997	_SVLQGK(gl)LTK_
ATP2B2	Ubiquitylation	K747	1.309		_NEK(gl)GEIEQER_
ATP2B2	Ubiquitylation	K773		-0.186	_SSPTDK(gl)HTLVK_
ATP2B2	Ubiquitylation	K807	0.010	1.083	_QVVAVTGDGTNDGPALKK(gl)_
ATP2B2	Ubiquitylation	K921	-0.811	0.202	_NK(gl)PLISR_
ATP2B2	Phosphorylation	S1177	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1178	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1193	-0.342	-0.629	_IEDS(ph)EPHIPLIDDTDAEDDAPTKR_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
CAP1	Phosphorylation	T307	-1.904	-1.464	_SGPKPFSAPKPQT(ph)SPSPK_
CAP1	Phosphorylation	S308	-1.510	-1.436	_SGPKPFSAPKPQTS(ph)PSPK_
CAP1	Ubiquitylation	K398	0.063		_DVK(gl)VQVMGK_
CAP2	Phosphorylation	S312	-0.663	-0.689	_SHTPSPTS(ph)PK_
COL4A3BP	Phosphorylation	S377	-0.986	-1.717	_SSS(ph)MSSIDLVSASDDVHR_
CUL3	Ubiquitylation	K6		-0.611	_(ac)SNLSK(gl)GTGSR_
CUL3	Ubiquitylation	K236	1.952	0.663	_FLAENSASVYIKK(gl)_
CUL3	Ubiquitylation	K262	-0.525	-0.203	_STEEPIVK(gl)VVER_
CUL3	Ubiquitylation	K292	1.094	0.852	_NGK(gl)TEDLGCMYK_
CUL3	Ubiquitylation	K459		0.752	_LK(gl)TECGCQFTSK_
CUL3	Ubiquitylation	K680	-1.024		_IQTVAAK(gl)QGESDPERK_
EGFR	Phosphorylation	T693	0.486	-0.139	_ELVEPLT(ph)PSGEAPNQALLR_
EGFR	Phosphorylation	S991		-0.041	_MHLPS(ph)PTDSNFYR_
EPHB2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB2	Phosphorylation	S776	-0.147	-0.171	_FLEDDTS(ph)DPTYTSALGGK_
EPHB2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
GATA3	Phosphorylation	S162	-1.195	-0.563	_DVS(ph)PDPSLSTPGSAGSAR_
HSPA14	Ubiquitylation	K402	0.366	-0.837	_DILVK(gl)GVDESGASR_
HSPA4	Ubiquitylation	K68		2.744	_NTVQGFK(gl)R_
HSPA4	Phosphorylation	S76	1.705		_AFS(ph)DPFVEAEK_
HSPA4	Ubiquitylation	K126	0.347	0.484	_LK(gl)ETAESVLK_
HSPA4	Ubiquitylation	K194	-0.781	-1.204	_QDLPALEEK(gl)PR_
HSPA4	Ubiquitylation	K272	0.617	0.172	_LSQECEK(gl)LKK_
HSPA4	Ubiquitylation	K329	0.204		_SVLEQTK(gl)LK_
HSPA4	Ubiquitylation	K351	-0.272	0.089	_IPAVK(gl)EK_
HSPA4	Ubiquitylation	K356	0.753		_ISK(gl)FFGK_
HSPA4	Ubiquitylation	K388	0.013	0.181	_GCALQCAILSPAFK(gl)VR_
HSPA4	Ubiquitylation	K477	-0.698	0.730	_VTPQSDGSSSK(gl)VK_
HSPA4	Ubiquitylation	K479	-0.593		_VTPQSDGSSSKVK(gl)_
HSPA4	Ubiquitylation	K568	-0.150	-0.894	_MDQPPQAK(gl)K_
HSPA4	Ubiquitylation	K612	-0.530		_MIMQDKLEK(gl)_
HSPA4	Ubiquitylation	K631	0.051		_DK(gl)LSGEYEK_
HSPA4	Phosphorylation	S647	0.741	1.114	_FVSEDDRNS(ph)FTLK_
HSPA4	Ubiquitylation	K674	0.564		_QVYVDK(gl)LAELK_
HSPA4	Ubiquitylation	K679	0.015	-0.069	_LAELK(gl)NLGQPIK_
HSPA4	Ubiquitylation	K686	0.085	-0.037	_NLGQPIK(gl)IR_
HSPA4	Ubiquitylation	K736	-0.113		_VEK(gl)STNEAMEWMNNK_
HSPA4	Ubiquitylation	K754	-0.656		_LNLQNK(gl)QSLTMDPVVK_
HSPA4L	Phosphorylation	S105		-0.289	_S(ph)FDDPIVQTER_
HSPA4L	Ubiquitylation	K225		-1.730	_QDLPPLDEK(gl)PR_
HSPA4L	Ubiquitylation	K382	-0.799	0.051	_IPAVK(gl)EQITK_
HSPA4L	Ubiquitylation	K672	-0.226		_LGTVYEK(gl)FITPEDLSK_
HSPA4L	Ubiquitylation	K788	-0.305		_MNAQNK(gl)LSLTQDPVVK_
HSPA5	Ubiquitylation	K81		-0.455	_LIGDAAK(gl)NQLTSNPENTVFDAK(gl)R_
HSPA5	Ubiquitylation	K96	-0.392	-0.109	_NQLTSNPENTVFDAK(gl)R_
HSPA5	Ubiquitylation	K118		0.783	_FLPFK(gl)VVEK_
HSPA5	Ubiquitylation	K340		0.743	_STMK(gl)PVQK_
HSPA5	Ubiquitylation	K352	-0.469	0.822	_VLEDSDLK(gl)K_
HSPA5	Ubiquitylation	K353	-0.469		_VLEDSDLK(gl)K_
HSPA5	Ubiquitylation	K447		3.097	_NTVVPTKK(gl)_
HSPA5	Ubiquitylation	K523	-0.120	0.631	_NK(gl)ITITNDQNR_
HSPA6	Ubiquitylation	K359	0.339		_LLQDFFNGK(gl)ELNK_
HSPA8	Ubiquitylation	K3	-0.324		_(ac)SK(gl)GPAVGIDLGTTYSCVGVFQHGK_
HSPA8	Ubiquitylation	K56	-0.260	1.224	_LIGDAAK(gl)NQVAMNPTNTVFDAK(gl)R_
HSPA8	Ubiquitylation	K71	0.041	1.713	_NQVAM(ox)NPTNTVFDAK(gl)R_
HSPA8	Ubiquitylation	K108	0.301	0.877	_VQVEYK(gl)GETK_
HSPA8	Ubiquitylation	K126	-0.071	0.472	_SFYPEEVSSMVLTK(gl)MK_
HSPA8	Ubiquitylation	K128	1.160	0.420	_MK(gl)EIAEAYLGK_
HSPA8	Ubiquitylation	K159	0.192	2.025	_QATK(gl)DAGTIAGLNVLR_
HSPA8	Ubiquitylation	K187		0.744	_IINEPTAAAIAYGLDK(gl)K_
HSPA8	Ubiquitylation	K188	-0.076	0.744	_IINEPTAAAIAYGLDKK(gl)_
HSPA8	Ubiquitylation	K319	0.026	-0.313	_GTLDPVEK(gl)ALR_
HSPA8	Ubiquitylation	K325	0.501	-0.341	_ALRDAK(gl)LDK_
HSPA8	Ubiquitylation	K328	-0.057	0.670	_LDK(gl)SQIHDIVLVGGSTR_
HSPA8	Ubiquitylation	K348	0.390	3.929	_IQK(gl)LLQDFFNGK_
HSPA8	Ubiquitylation	K357	0.339		_LLQDFFNGK(gl)ELNK_
HSPA8	Ubiquitylation	K451	0.095	0.846	_AMTK(gl)DNNLLGK_
HSPA8	Ubiquitylation	K497	0.354	0.667	_STGK(gl)ENKITITNDK_
HSPA8	Ubiquitylation	K500	0.066	1.038	_ENK(gl)ITITNDK_
HSPA8	Ubiquitylation	K507	-0.228	-0.104	_ITITNDK(gl)GR_
HSPA8	Ubiquitylation	K512	0.321	0.692	_LSK(gl)EDIER_
HSPA8	Ubiquitylation	K524	0.032	-0.180	_M(ox)VQEAEK(gl)YKAEDEKQR_
HSPA8	Ubiquitylation	K526	4.133	0.230	_MVQEAEKYK(gl)AEDEK_
HSPA8	Ubiquitylation	K531	1.093		_MVQEAEK(gl)YKAEDEK(gl)QR_
HSPA8	Ubiquitylation	K539	-0.121	0.409	_VSSK(gl)NSLESYAFNMK_
HSPA8	Ubiquitylation	K557		-0.270	_ATVEDEK(gl)LQGK_
HSPA8	Ubiquitylation	K597	0.282		_NQTAEKEEFEHQQK(gl)ELEK_
HSPA8	Ubiquitylation	K601	0.005	0.196	_ELEK(gl)VCNPIITK_
HSPA9	Ubiquitylation	K368	-0.622	-0.734	_TIAPCQK(gl)AMQDAEVSK_
HSPH1	Ubiquitylation	K196	-0.467	0.111	_QDLPSLDEK(gl)PR_
HSPH1	Ubiquitylation	K353	0.098	0.212	_IPAVK(gl)ER_
HSPH1	Ubiquitylation	K358	-0.054		_IAK(gl)FFGK_
HSPH1	Ubiquitylation	K473	0.301		_FVVQNVSAQK(gl)DGEK_
HSPH1	Ubiquitylation	K587	-1.279		_KVDQPPEAK(gl)KPK_
HSPH1	Ubiquitylation	K650	-0.130		_DK(gl)LCGPYEK_
HSPH1	Ubiquitylation	K705	-0.399	0.190	_IGTPVK(gl)VR_
HSPH1	Phosphorylation	S811	0.531	0.626	_IES(ph)PKLER_
MAP7	Phosphorylation	S231	0.576		_LSSSSATLLNS(ph)PDR_
MAP7	Phosphorylation	S387	-1.533	-0.965	_AAPAQVRPPS(ph)PGNIRPVK_
MAPK14	Phosphorylation	S2	3.221	3.623	_(ac)S(ph)QERPTFYR_
MAPK14	Phosphorylation	T180	0.958	1.087	_HTDDEM(ox)T(ph)GYVATR_
MAPK14	Phosphorylation	Y182	1.388	1.374	_HTDDEM(ox)TGY(ph)VATR_
MAPK14	Ubiquitylation	K249	0.073	-1.380	_LVGTPGAELLKK(gl)_
MED1	Phosphorylation	S664		3.368	_DNPAQDFSTLYGSS(ph)PLER_
MED1	Phosphorylation	S771	-1.422		_LSS(ph)SDSIGPDVTDILSDIAEEASKLPSTSDDCPAIGTPLR_
MED1	Phosphorylation	T1051	-1.201	-1.247	_SQT(ph)PPGVATPPIPK_
MED1	Phosphorylation	T1057		-1.294	_SQT(ph)PPGVAT(ph)PPIPK_
MED1	Phosphorylation	S1155	0.689		_NSSQSGGKPGS(ph)SPITK_
MED1	Phosphorylation	S1156	0.829	1.055	_NSSQSGGKPGSS(ph)PITK_
MED1	Phosphorylation	S1192		-0.792	_PSSLM(ox)NPSLSKPNIS(ph)PSHSRPPGGSDK_
MED1	Phosphorylation	S1223	1.061	1.013	_AKS(ph)PISSGSGGSHM(ox)SGTSSSSGM(ox)K_
MED1	Phosphorylation	S1433	-0.191		_NYGS(ph)PLISGSTPK_
MSX1	Phosphorylation	S154		0.148	_RLS(ph)PPACTLR_
RP2	Ubiquitylation	K273	0.275	0.425	_EVSMK(gl)AEDAQR_
SHROOM1	Phosphorylation	S188	2.146	0.126	_SAS(ph)LSHPGGEGEPAR_
SHROOM1	Phosphorylation	S308		0.201	_SAS(ph)GEVLGSWGGSGGTIPIVQAVPQGAETPRPLFQTK_
SHROOM2	Phosphorylation	S1337	-0.977	-0.027	_SLADILDPS(ph)VKIK_
SHROOM3	Phosphorylation	S816		0.829	_TVS(ph)TSSTSGNDFEETK_
SHROOM3	Phosphorylation	S910	-0.534	-1.354	_DRPGS(ph)PESPLLDAPFSR_
SHROOM3	Phosphorylation	S1441	-0.680	-0.409	_EDS(ph)LPEESSAPDFANLK_
SMARCA4	Ubiquitylation	K357	-0.934		_ITPIQK(gl)PR_
SMARCA4	Ubiquitylation	K405	0.109	1.148	_ATIELK(gl)ALR_
SMARCA4	Ubiquitylation	K437	-0.317		_DTALETALNAK(gl)AYKR_
SMARCA4	Ubiquitylation	K455	0.225		_ITEK(gl)LEK_
SMARCA4	Ubiquitylation	K496		0.923	_SVTGK(gl)IQK_
SMARCA4	Phosphorylation	S677	-0.880	-0.324	_KAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK_
SMARCA4	Ubiquitylation	K1283	0.125		_ILAAAK(gl)YK_
SMARCA4	Phosphorylation	S1413	-0.265	0.515	_EVDYSDS(ph)LTEK_
SMARCA4	Phosphorylation	S1486	-0.713	-0.935	_LS(ph)PNPPNLTK_
SOX6	Phosphorylation	S98	-0.827	-0.182	_NTSTS(ph)PHKPDEGSR_
SSH1	Phosphorylation	S937	0.799	0.728	_SSS(ph)SDSIHSVR_
STK4	Ubiquitylation	K176		-0.350	_DIK(gl)AGNILLNTEGHAK_
STK4	Ubiquitylation	K205	-0.223	-0.386	_LADFGVAGQLTDTMAK(gl)R_
STK4	Phosphorylation	S320	0.555	0.552	_EVDQDDEENS(ph)EEDEMDSGTM(ox)VR_
STK4	Phosphorylation	S344	0.573	0.366	_EMDQDDEENS(ph)EEDEMDSGTMVR_
TBCC	Phosphorylation	S164		0.198	_VDAAPGIPPAVES(ph)IQDSPLPK_
TBCC	Phosphorylation	S168		0.198	_VDAAPGIPPAVES(ph)IQDSPLPK_
WDR19	Ubiquitylation	K475		0.103	_LFPAVDDK(gl)CR_