RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ERCC6	4	-1.310	2.800	5.118			1.227	2.135
ERCC6	4	0.480	0.030	5.118			1.227	2.135
ERCC6	4	-1.310	2.800		0.074	0.258
ERCC6	4	0.480	0.030		0.074	0.258
ERCC2	2	-0.590	1.060	-0.491		1.066
ERCC1	1	-1.720	3.820
ERCC1	1	-1.460	2.450
SLC12A2	1	-0.590	1.190				-0.386	-0.263
DICER1	1	-0.810	0.800	1.748			-0.207	-0.634
ICMT	1	-2.180	4.300				-0.277	-0.231
SMO	1	-0.690	1.110		1.532
PCNT	1						0.094	0.158
SPTBN2	1	0.870	0.420				0.258	0.313
ZFX	0	-0.670	0.680	-0.103			1.047	0.485
APBA2	0	0.670	-0.860
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
ADD1	0	0.440	0.020		-0.881	-0.757	1.191	-0.072
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750	-0.166	-0.094	0.032	0.420	0.504
FKBP8	0	-1.260	1.670				-0.042	0.441
FKBP8	0	-1.260	1.670	-1.108	-0.333	-1.072
HOXA5	0	0.030	-0.190					-0.887
PLEKHA1	0	-0.130	0.730
PLEKHA1	0	-0.130	0.730
PLEKHA1	0	-0.130	0.730
TNKS2	0	0.000	-0.260
TNKS2	0	0.000	-0.260
GPD2	0	-0.420	0.270	-0.375			0.478	0.358
RBBP6	0	0.480	-0.250				-0.003	0.093
NCOA3	0	0.000	-0.330
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
WDTC1	0	1.210	-1.020	-0.013
NDUFS6	0	-1.180	1.230				0.083	0.081
SLC25A25	0	-0.380	0.270
ARID5B	0	0.580	-0.330
FLVCR1	0	1.260	-0.470
FLVCR1	0	1.260	-0.470
TTC8	0	0.800	-1.070
ANKRD11	0	0.610	-0.630				-0.937	-0.320
CLIC4	0			-0.105
DHCR7	0			-0.384			0.267	0.288
GIGYF2	0	-0.660	0.630
GIGYF2	0	-0.660	0.630	-0.833			-0.034	-0.175

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADD1	Phosphorylation	T11	-0.730	-0.576	_AAVVT(ph)SPPPTTAPHK_
ADD1	Phosphorylation	S12	-1.409	-0.665	_AAVVTS(ph)PPPTTAPHK_
ADD1	Phosphorylation	S64		0.260	_RVSMILQS(ph)PAFCEELESMIQEQFK_
ADD1	Ubiquitylation	K140		0.386	_GSDSIAYDK(gl)GEK_
ADD1	Ubiquitylation	K143	0.288	0.386	_GSDSIAYDKGEK(gl)_
ADD1	Phosphorylation	S353	-0.425	-0.286	_S(ph)RSPGSPVGEGTGSPPK_
ADD1	Phosphorylation	S355	-0.007	-0.345	_SRS(ph)PGSPVGEGTGSPPK_
ADD1	Phosphorylation	S358	-0.346	-0.241	_SPGS(ph)PVGEGTGSPPK_
ADD1	Phosphorylation	S366		-1.004	_SPGSPVGEGTGS(ph)PPKWQIGEQEFEALMR_
ADD1	Phosphorylation	T429	-0.303		_YSDVEVPASVTGYSFASDGDSGT(ph)CSPLR_
ADD1	Phosphorylation	S431	-0.176	-0.145	_KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR_
ADD1	Phosphorylation	S436	0.937	0.639	_KYSDVEVPASVTGYSFASDGDSGTCSPLRHS(ph)FQK_
ADD1	Phosphorylation	S483	-0.425	-1.128	_TSTS(ph)AVPNLFVPLNTNPK_
ADD1	Phosphorylation	S586	-0.125	1.117	_QKGS(ph)EENLDEAR_
ADD1	Phosphorylation	S726	0.518	0.668	_TPS(ph)FLKK_
ANKRD11	Phosphorylation	S276	0.025	0.100	_VANS(ph)PTMVNLLLGK_
APBA2	Phosphorylation	S481		0.365	_S(ph)ASQDCIETTPGAQEGK_
APBA2	Phosphorylation	S483	-0.028	0.164	_SAS(ph)QDCIETTPGAQEGK_
APBA2	Ubiquitylation	K498	0.305		_SASQDCIETTPGAQEGKK(gl)_
ARID5B	Phosphorylation	S264	0.496	0.623	_RDS(ph)FSGVK_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
CLIC4	Ubiquitylation	K106	-0.220	0.166	_YLK(gl)LSPK_
CLIC4	Ubiquitylation	K146	-0.028	0.596	_GLLK(gl)TLQK_
CLIC4	Ubiquitylation	K199	0.892	0.090	_LHIVK(gl)VVAK_
CLIC4	Ubiquitylation	K249	-0.463		_DEFTNTCPSDKEVEIAYSDVAK(gl)R_
DHCR7	Ubiquitylation	K4		-0.994	_(ac)AAK(gl)SQPNIPK_
DHCR7	Ubiquitylation	K13	-0.522	0.107	_AK(gl)SLDGVTNDR_
DHCR7	Phosphorylation	S14	0.877	0.606	_S(ph)LDGVTNDR_
DHCR7	Ubiquitylation	K88	-0.930	-0.171	_LSDIWAK(gl)TPPITR_
ERCC1	Ubiquitylation	K162	-0.634		_LQSLGK(gl)NFALR_
ERCC1	Ubiquitylation	K243		-0.245	_VTECLTTVK(gl)SVNK_
ERCC1	Ubiquitylation	K281		-1.586	_EDLALCPGLGPQK(gl)AR_
ERCC2	Ubiquitylation	K268	5.973	1.957	_CQGNLETLQK(gl)TVLR_
ERCC2	Ubiquitylation	K507		-2.034	_GNDQVAISSK(gl)FETR_
ERCC6	Phosphorylation	S158	0.039	0.466	_IIEQLS(ph)PQAATSR_
ERCC6	Phosphorylation	S212		-0.295	_IELDHAS(ph)LEEDAEPGPSSLGSMLMPVQETAWEELIR_
ERCC6	Ubiquitylation	K255	0.184	-1.007	_TGQMTPFGTQIPQK(gl)QEK_
ERCC6	Ubiquitylation	K258	0.830	-1.007	_TGQMTPFGTQIPQKQEK(gl)_
ERCC6	Phosphorylation	T303		-1.105	_KAPAPVT(ph)PPAPVQNK_
ERCC6	Ubiquitylation	K345	0.454	-0.211	_ALQFQGK(gl)VGLPK_
ERCC6	Ubiquitylation	K606	0.305		_VAILHETGSYTHK(gl)K_
ERCC6	Ubiquitylation	K607	0.278		_VAILHETGSYTHKK(gl)_
ERCC6	Ubiquitylation	K663	-0.597	0.145	_NPNAAVTLACK(gl)QFR_
ERCC6	Ubiquitylation	K729	1.490	0.510	_TAYK(gl)CACVLR_
ERCC6	Ubiquitylation	K759		-0.019	_MSLSLPDK(gl)NEQVLFCR_
ERCC6	Ubiquitylation	K774	0.041	1.536	_LTDEQHK(gl)VYQNFVDSK_
ERCC6	Ubiquitylation	K783	0.262	-0.019	_VYQNFVDSK(gl)EVYR_
ERCC6	Ubiquitylation	K955	-0.048	-0.623	_K(gl)QVTVYR_
ERCC6	Phosphorylation	S1068	0.742	0.512	_KFPASNISVNDATS(ph)SEEKSEAK_
ERCC6	Phosphorylation	S1142	0.830	0.891	_TSMPS(ph)GDESIDEK_
ERCC6	Phosphorylation	S1146	1.367	0.961	_TSMPSGDES(ph)IDEK_
ERCC6	Ubiquitylation	K1156	0.818	-0.034	_LGLSYK(gl)R_
ERCC6	Ubiquitylation	K1295	0.149	0.443	_VAQDALK(gl)ALR_
ERCC6	Ubiquitylation	K1327	-0.793	0.156	_GISGAPAGK(gl)K_
ERCC6	Ubiquitylation	K1328	-0.793	0.232	_GISGAPAGKK(gl)_
ERCC6	Phosphorylation	S1345	0.486	0.469	_NSNFSVQHPS(ph)STSPTEK_
ERCC6	Phosphorylation	S1346	0.052	0.548	_NSNFSVQHPSS(ph)TSPTEK_
ERCC6	Phosphorylation	T1347	0.180	0.745	_NSNFSVQHPSST(ph)SPTEK_
ERCC6	Phosphorylation	S1348	0.238	0.374	_NSNFSVQHPSSTS(ph)PTEK_
ERCC6	Ubiquitylation	K1352	-1.415		_NSNFSVQHPSSTSPTEK(gl)CQDGIMK_
ERCC6	Ubiquitylation	K1359	0.923		_CQDGIMK(gl)K_
ERCC6	Ubiquitylation	K1360		2.898	_CQDGIMKK(gl)_
ERCC6	Ubiquitylation	K1363	-0.116	-0.707	_EGK(gl)DNVPEHFSGR_
ERCC6	Phosphorylation	S1379	0.589	0.418	_AEDADS(ph)SSGPLASSSLLAK_
ERCC6	Ubiquitylation	K1392	-0.822	-0.293	_AEDADSSSGPLASSSLLAK(gl)MR_
ERCC6	Ubiquitylation	K1457	0.602	1.210	_EILQEFESK(gl)LSASQSCVFR_
ERCC6	Ubiquitylation	K1487	-0.363	-0.266	_TSGGEGIWK(gl)LKPEYC_
FKBP8	Ubiquitylation	K217	-0.362	-0.356	_VK(gl)CLNNLAASQLK_
FKBP8	Ubiquitylation	K258		-0.292	_GK(gl)VLAQQGEYSEAIPILR_
FKBP8	Ubiquitylation	K278	-1.013	-0.590	_AALK(gl)LEPSNK_
FKBP8	Ubiquitylation	K284	-0.086		_LEPSNK(gl)TIHAELSK_
FLVCR1	Ubiquitylation	K33	-0.251	-1.311	_GAPVGK(gl)ESVELQNGPK_
FLVCR1	Phosphorylation	S536	1.258	0.701	_AIPADS(ph)PTDQEPK_
FLVCR1	Ubiquitylation	K543	-0.643		_AIPADSPTDQEPK(gl)TVMLSK_
FLVCR1	Ubiquitylation	K549	0.772	0.078	_TVMLSK(gl)QSESAI_
GIGYF2	Phosphorylation	S20	1.394	0.572	_ALSS(ph)GGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	T25	-1.198	-0.724	_ALSSGGSIT(ph)SPPLSPALPK_
GIGYF2	Phosphorylation	S26	-1.157	-0.630	_ALSSGGSITS(ph)PPLSPALPK_
GIGYF2	Phosphorylation	S30	-1.557	-1.373	_ALSSGGSITS(ph)PPLS(ph)PALPK_
GIGYF2	Phosphorylation	T404	-0.311	-0.134	_PGT(ph)PSDHQSQEASQFER_
GIGYF2	Ubiquitylation	K1007	0.724	-1.404	_ALQQQQQQQQQK(gl)LSGWGNVSKPSGTTK_
GIGYF2	Ubiquitylation	K1016		-0.562	_LSGWGNVSK(gl)PSGTTK_
GIGYF2	Ubiquitylation	K1106	0.994		_NSNMGFWDDAVK(gl)EVGPR_
GIGYF2	Ubiquitylation	K1125	0.915	-0.414	_NNASLSK(gl)SVGVSNR_
GNAS	Ubiquitylation	K8	0.430	0.328	_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K17	-0.011		_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K32	0.249	-0.446	_QLQK(gl)DKQVYR_
GNAS	Ubiquitylation	K58	-1.182	0.161	_STIVK(gl)QM(ox)R_
GNAS	Ubiquitylation	K92	-1.333	-0.290	_ATK(gl)VQDIKNNLK_
GNAS	Ubiquitylation	K97		0.076	_VQDIK(gl)NNLK_
GNAS	Ubiquitylation	K167	-1.721		_LHALK(gl)LR_
GNAS	Ubiquitylation	K301	-0.955	-0.198	_QDLLAEK(gl)VLAGK_
GNAS	Ubiquitylation	K308		-0.472	_SK(gl)IEDYFPEFAR_
ICMT	Ubiquitylation	K278		0.187	_VPTGLPFIK(gl)GVK_
NCOA3	Phosphorylation	S861	-0.217	-0.429	_AVS(ph)LDSPVSVGSSPPVK_
NCOA3	Phosphorylation	S870	-0.416	-0.360	_AVS(ph)LDSPVSVGS(ph)SPPVK_
NCOA3	Phosphorylation	S1333		-0.364	_VSS(ph)PPNAMMSSR_
PCNT	Ubiquitylation	K505	1.075		_VEDLEQLK(gl)QR_
PCNT	Phosphorylation	S1653		1.274	_RES(ph)EVLDLKEQLEK_
PCNT	Phosphorylation	S2177		0.088	_NWDSLIPDEMPDS(ph)PIQEK_
PCNT	Phosphorylation	S2192		1.692	_SECQDMSLSS(ph)PTSVLGGSR_
PCNT	Phosphorylation	S2214		0.162	_KS(ph)PVGMLDLSSWSSPEVLR_
PCNT	Phosphorylation	S2327		0.058	_DVEDFITTSFDSQETLSS(ph)PPPGLEGK_
PCNT	Phosphorylation	S2352	-0.599	-0.395	_LS(ph)PGSGGPEAQTAGPVTPASISGR_
PCNT	Phosphorylation	S2355	-0.685	-0.511	_LSPGS(ph)GGPEAQTAGPVTPASISGR_
PCNT	Ubiquitylation	K2685	-0.556		_ESQSAK(gl)ALEELR_
PCNT	Ubiquitylation	K3099		-0.180	_SAWK(gl)PDETAPQSSLR_
PLEKHA1	Ubiquitylation	K229	-0.332		_SELEK(gl)EPLR_
PLEKHA1	Phosphorylation	S308	0.664	0.154	_RLS(ph)NPCIQR_
PLEKHA1	Phosphorylation	S332	0.540		_SNS(ph)LVSTFTM(ox)EK_
RBBP6	Phosphorylation	S360	0.273	0.207	_NLQPLMRS(ph)PISR_
RBBP6	Phosphorylation	S516	-0.967	-0.408	_LGYLVS(ph)PPQQIR_
RBBP6	Phosphorylation	S772	0.920	1.037	_SRS(ph)PQAFR_
RBBP6	Ubiquitylation	K809	-1.748		_EVPPPYDMK(gl)AYYGR_
RBBP6	Ubiquitylation	K824	-0.969		_SVDFRDPFEK(gl)ER_
RBBP6	Ubiquitylation	K843	0.400		_YYK(gl)GYAAGAQPR_
RBBP6	Phosphorylation	S861	0.069	-0.031	_PSANRENFS(ph)PER_
RBBP6	Phosphorylation	S873	0.127	-1.457	_FLPLNIRNS(ph)PFTR_
RBBP6	Ubiquitylation	K901	-0.567		_NIGSNYPEK(gl)LSAR_
RBBP6	Phosphorylation	T984	-0.143	-0.647	_DDAT(ph)PVRDEPMDAESITFK_
RBBP6	Phosphorylation	S1179	-0.720	-0.834	_LEVTEIVKPS(ph)PK_
RBBP6	Phosphorylation	S1221	-0.752	-0.396	_IGS(ph)TENISNTKEPSEK_
RBBP6	Phosphorylation	T1269		0.848	_VTGTEGSSSTLVDYT(ph)STSSTGGSPVRK_
RBBP6	Phosphorylation	S1277	0.737	0.455	_VTGTEGSSSTLVDYTSTSSTGGS(ph)PVR_
RBBP6	Phosphorylation	S1328	0.968	0.961	_WDKDDFES(ph)EEEDVK_
RBBP6	Phosphorylation	S1463	-0.937	-1.513	_ASS(ph)NKDFTPNR_
RBBP6	Phosphorylation	T1468	-0.732	-1.781	_ASSNKDFT(ph)PNR_
SLC12A2	Phosphorylation	S79		-0.757	_DGGGVRDEGPAAAGDGLGRPLGPTPSQS(ph)R_
SLC12A2	Ubiquitylation	K136	-0.018		_QTPADGEASGESEPAKGSEEAK(gl)GR_
SLC12A2	Ubiquitylation	K280	-0.876	0.485	_DAVVTYTAESK(gl)GVVK_
SLC12A2	Ubiquitylation	K284	-0.876		_DAVVTYTAESK(gl)GVVK_
SLC12A2	Ubiquitylation	K833	0.031	0.510	_QAMK(gl)EMSIDQAK_
SLC12A2	Ubiquitylation	K841	-0.060	0.706	_EMSIDQAK(gl)YQR_
SLC12A2	Phosphorylation	S944		0.525	_LKEGLDISHLQGQEELLSSQEKS(ph)PGTK_
SLC12A2	Ubiquitylation	K948	1.471	0.675	_SPGTK(gl)DVVVSVEYSK_
SLC12A2	Ubiquitylation	K958	1.077	1.080	_DVVVSVEYSK(gl)K_
SLC12A2	Ubiquitylation	K959	1.579	1.080	_DVVVSVEYSKK(gl)_
SLC12A2	Ubiquitylation	K966	1.102		_KSDLDTSK(gl)PLSEKPITHK_
SLC12A2	Ubiquitylation	K971	1.154	-0.324	_KSDLDTSKPLSEK(gl)PITHK_
SLC12A2	Ubiquitylation	K983	0.798		_VEEEDGK(gl)TATQPLLKK_
SLC12A2	Ubiquitylation	K991	1.299	0.502	_TATQPLLK(gl)K_
SLC12A2	Ubiquitylation	K992	1.045		_K(gl)ESKGPIVPLNVADQK_
SLC12A2	Phosphorylation	S994	0.106	-0.409	_KES(ph)KGPIVPLNVADQK_
SLC12A2	Ubiquitylation	K995	1.109	0.084	_ESK(gl)GPIVPLNVADQK_
SLC12A2	Ubiquitylation	K1018	0.796		_LLEASTQFQKK(gl)_
SPTBN2	Ubiquitylation	K2304	1.539		_LGLQDGK(gl)EYLFQAK_
TNKS2	Ubiquitylation	K509		-1.494	_AGDVETVK(gl)K_
TNKS2	Ubiquitylation	K762		-1.426	_GK(gl)YEICK_
TNKS2	Ubiquitylation	K812	-0.176	-1.693	_GDAALLDAAK(gl)K_
TNKS2	Ubiquitylation	K813	-0.176	-1.693	_GDAALLDAAK(gl)K_
TNKS2	Ubiquitylation	K996		-0.529	_YNILK(gl)IQK_
TNKS2	Ubiquitylation	K1081		-0.151	_LIK(gl)GVER_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
TTC8	Ubiquitylation	K184		-0.765	_LNLTK(gl)YSQKPK_
TTC8	Ubiquitylation	K259		0.324	_VQIGK(gl)CYYR_
WDTC1	Ubiquitylation	K486	-0.859	-0.593	_DITAALFSK(gl)NDGEEK_
WDTC1	Ubiquitylation	K492	-0.011	-2.040	_NDGEEK(gl)KGPGGGAPVR_
WDTC1	Ubiquitylation	K493	-0.011	-0.870	_K(gl)GPGGGAPVR_
WDTC1	Phosphorylation	S511	-0.489	0.459	_KDS(ph)ISEDEMVLR_
ZFX	Phosphorylation	S313	-0.303	-0.112	_ADPGEDDLGGTVDIVES(ph)EPENDHGVELLDQNSSIR_