bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: HOXA5

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HOXA5 0 1.182 0.030 -0.190 -0.887
HOXA5 0 1.182 0.030 -0.190 0.888 0.311 -0.017

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for HOXA5:





Protein-protein Interactions for HOXA5

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ERP44 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in HOXA5

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Homeobox_dom IPR001356 0.63
Category members Homeobox_metazoa IPR020479 0.28
Category members Homeodomain-like IPR009057 0
Category members Homeobox_antennapedia IPR017995 0


Protein complexes (CORUM database) featuring HOXA5

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HOXA5

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0045647 negative regulation of erythrocyte differentiation Database 0.41
Category members GO Category GO:0030324 lung development Database 0.39
Category members GO Category GO:0033599 regulation of mammary gland epithelial cell proliferation Database 0.34
Category members GO Category GO:0060638 mesenchymal-epithelial cell signaling Database 0.26
Category members GO Category GO:0043065 positive regulation of apoptotic process Database 0.26
Category members GO Category GO:0007389 pattern specification process Database 0.18
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members GO Category GO:0060480 lung goblet cell differentiation Database 0.18
Category members GO Category GO:0060574 intestinal epithelial cell maturation Database 0.18
Category members GO Category GO:0003016 respiratory system process Database 0.17
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members GO Category GO:0045639 positive regulation of myeloid cell differentiation Database 0.13
Category members GO Category GO:0007585 respiratory gaseous exchange Database 0.08
Category members GO Category GO:0009952 anterior/posterior pattern specification Database 0.06
Category members GO Category GO:0035264 multicellular organism growth Database 0.04
Category members GO Category GO:0048704 embryonic skeletal system morphogenesis Database 0
Category members GO Category GO:0001501 skeletal system development Database 0
Category members GO Category GO:0002009 morphogenesis of an epithelium Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0010870 positive regulation of receptor biosynthetic process Database 0
Category members GO Category GO:0016477 cell migration Database 0
Category members GO Category GO:0016525 negative regulation of angiogenesis Database 0
Category members GO Category GO:0030878 thyroid gland development Database 0
Category members GO Category GO:0048286 lung alveolus development Database 0
Category members GO Category GO:0048706 embryonic skeletal system development Database 0
Category members GO Category GO:0060435 bronchiole development Database 0
Category members GO Category GO:0060439 trachea morphogenesis Database 0
Category members GO Category GO:0060441 epithelial tube branching involved in lung morphogenesis Database 0
Category members GO Category GO:0060484 lung-associated mesenchyme development Database 0
Category members GO Category GO:0060535 trachea cartilage morphogenesis Database 0
Category members GO Category GO:0060536 cartilage morphogenesis Database 0
Category members GO Category GO:0060644 mammary gland epithelial cell differentiation Database 0
Category members GO Category GO:0060749 mammary gland alveolus development Database 0
Category members GO Category GO:0060764 cell-cell signaling involved in mammary gland development Database 0


© Copyright Svejstrup Laboratory 2015