RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GTF2IRD2	1	0.070	-0.050	-0.275	-0.199	0.020	0.150	0.028
GTF2IRD2B	1			-0.275	-0.199	0.020	0.150	0.028
PML	1	-0.420	0.350		-0.244	0.322
ROCK1	0	-1.420	2.380		-0.112	-0.732
VASH1	0	1.580	-1.000
HOXA5	0	0.030	-0.190					-0.887
STAT1	0	-0.550	0.170
AMOT	0	1.330	-0.510	0.614			0.467	0.043
AMOT	0	1.330	-0.510
ROCK2	0	-1.660	2.330
COL4A2	0	-0.170	0.350				-0.692	-0.297
NF1	0	1.000	-0.500				0.444	-0.190

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AMOT	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOT	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOT	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOT	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOT	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
GTF2IRD2	Phosphorylation	S16	0.584	0.164	_(ac)AQVAMSTLPVEDEES(ph)SESR_
GTF2IRD2	Phosphorylation	S17	0.428	0.049	_(ac)AQVAM(ox)STLPVEDEESS(ph)ESR_
GTF2IRD2	Phosphorylation	S19		0.274	_(ac)AQVAMSTLPVEDEESSES(ph)R_
GTF2IRD2	Ubiquitylation	K74	0.301	0.254	_DFQK(gl)DFVK_
GTF2IRD2	Ubiquitylation	K130	-0.741	-0.548	_ALGK(gl)STVVPVPYEK_
GTF2IRD2	Phosphorylation	S210	-0.322	-0.436	_SILS(ph)PGGSCGPIK_
GTF2IRD2	Ubiquitylation	K353	0.303	-1.178	_EFNFEK(gl)WNAR_
GTF2IRD2	Ubiquitylation	K378	0.347		_KYAQAIK(gl)AK_
GTF2IRD2	Phosphorylation	S412	1.989	0.874	_RPS(ph)TYGIPR_
GTF2IRD2	Phosphorylation	S515		-0.502	_FEAHPNDLYVEGLPENIPFRS(ph)PSWYGIPR_
GTF2IRD2	Phosphorylation	T556	-0.743	-0.549	_T(ph)NTPVKEDWNVR_
GTF2IRD2	Phosphorylation	T558	0.025	-0.496	_TNT(ph)PVKEDWNVR_
GTF2IRD2	Ubiquitylation	K561	0.309	-0.904	_TNTPVK(gl)EDWNVR_
GTF2IRD2	Ubiquitylation	K752	-0.663		_CGEALGLK(gl)QAVK_
GTF2IRD2	Phosphorylation	S830	1.307		_KINS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER_
GTF2IRD2B	Phosphorylation	S16	0.584	0.164	_(ac)AQVAMSTLPVEDEES(ph)SESR_
GTF2IRD2B	Phosphorylation	S17	0.428	0.049	_(ac)AQVAM(ox)STLPVEDEESS(ph)ESR_
GTF2IRD2B	Phosphorylation	S19		0.274	_(ac)AQVAMSTLPVEDEESSES(ph)R_
GTF2IRD2B	Ubiquitylation	K74	0.301	0.254	_DFQK(gl)DFVK_
GTF2IRD2B	Ubiquitylation	K130	-0.741	-0.548	_ALGK(gl)STVVPVPYEK_
GTF2IRD2B	Phosphorylation	S210	-0.322	-0.436	_SILS(ph)PGGSCGPIK_
GTF2IRD2B	Ubiquitylation	K353	0.303	-1.178	_EFNFEK(gl)WNAR_
GTF2IRD2B	Ubiquitylation	K378	0.347		_KYAQAIK(gl)AK_
GTF2IRD2B	Phosphorylation	S412	1.989	0.874	_RPS(ph)TYGIPR_
GTF2IRD2B	Phosphorylation	S515		-0.502	_FEAHPNDLYVEGLPENIPFRS(ph)PSWYGIPR_
GTF2IRD2B	Phosphorylation	T556	-0.743	-0.549	_T(ph)NTPVKEDWNVR_
GTF2IRD2B	Phosphorylation	T558	0.025	-0.496	_TNT(ph)PVKEDWNVR_
GTF2IRD2B	Ubiquitylation	K561	0.309	-0.904	_TNTPVK(gl)EDWNVR_
GTF2IRD2B	Ubiquitylation	K752	-0.663		_CGEALGLK(gl)QAVK_
GTF2IRD2B	Phosphorylation	S830	1.307		_KINS(ph)SPNVNTTASGVEDLNIIQVTIPDDDNER_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
PML	Ubiquitylation	K394	0.515	0.360	_LQDLSSCITQGK(gl)DAAVSKK_
PML	Phosphorylation	S403		3.141	_KAS(ph)PEAASTPRDPIDVDLPEEAER_
PML	Ubiquitylation	K476	-0.403	-0.735	_GPSYGEDVSNTTTAQK(gl)R_
PML	Phosphorylation	S504	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S505	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S518	-1.632	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S527	-1.392	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S530	0.466	0.093	_S(ph)PVIGSEVFLPNSNHVASGAGEAEER_
PML	Ubiquitylation	K623		-0.784	_IDNETQK(gl)ISQLAAVNR_
ROCK1	Phosphorylation	S1105	-0.245	-0.845	_LLDLSDSTSVAS(ph)FPSADETDGNLPESR_
ROCK2	Ubiquitylation	K1222	-0.679		_ADAK(gl)EIPR_
STAT1	Phosphorylation	S727	1.377	0.974	_LQTTDNLLPMS(ph)PEEFDEVSR_
VASH1	Phosphorylation	S313	-0.369	-0.324	_GTGPPS(ph)PTKDR_