RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
NIPBL	2	-0.180	-0.270
NIPBL	2	-0.180	-0.270		1.066	1.181
NIPBL	2	-0.180	-0.270	0.759			0.809	0.590
CTNNA1	1	-0.520	1.660		-0.690	-1.164
CTNNA1	1	-0.520	1.660	0.139			0.436	0.323
EXOC8	1	0.140	-0.450				0.260	1.744
LAMTOR1	1	0.700	-0.850	0.343			0.382
DMD	1	0.960	-0.560				0.854	0.214
DVL2	0	-0.050	0.580
RRAGD	0	-0.870	0.980
RRAGD	0	-0.870	0.980
PRKCZ	0	-0.290	0.310
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
RRAGB	0	1.330	-0.980	0.176
EYA1	0	-0.440	-0.140
SLC9A3R1	0	0.240	-0.810
LAMTOR3	0	0.150	0.120				-0.396	0.095
WNT5A	0
RRAGC	0	-0.530	0.100
RRAGC	0	-0.530	0.100
OPTN	0
AMOT	0	1.330	-0.510	0.614			0.467	0.043
AMOT	0	1.330	-0.510
AJUBA	0	-0.310	0.400
LATS1	0	0.520	-0.880
CD63	0	-1.190	1.800				1.412	0.887
AP1AR	0	1.030	-1.110
FRMD6	0	0.600	-0.900
TP53	0	-1.070	1.050	-2.808	0.076	-0.094	0.436	0.497
RAB10	0	-0.280	-0.200		1.641	-1.484	0.560	0.491
ANK2	0	0.370	-0.920
GRID2	0	0.990	-0.450				1.051	0.477
RRAGA	0	-0.490	0.890	0.176
PRKCI	0	0.730	-0.460	1.483			0.192	0.350
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
SIN3A	0	-0.610	0.780	0.378	-0.208	0.304	-0.168	0.410
ID4	0	0.670	-0.690
ZDHHC18	0	-0.030	-0.200
CSNK1E	0	-0.170	-0.440		0.150	0.527
CSNK1E	0	-0.170	-0.440	1.237			-0.682	-0.148

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AJUBA	Phosphorylation	S119	0.930		_LEPTAPALS(ph)PR_
AMOT	Ubiquitylation	K94	-0.138		_QEPQGQEIQSENLIMEK(gl)QLSPR_
AMOT	Ubiquitylation	K113	-0.211	0.313	_MQNNEELPTYEEAK(gl)VQSQYFR_
AMOT	Ubiquitylation	K503	-0.204		_NK(gl)LEGEIR_
AMOT	Phosphorylation	S712	0.161	0.250	_DTTVIS(ph)HSPNTSYDTALEAR_
AMOT	Phosphorylation	S714	0.324	0.183	_DTTVISHS(ph)PNTSYDTALEAR_
ANK2	Phosphorylation	S1459	0.673	0.675	_ES(ph)ESDQEQEEEIDM(ox)TSEK_
ANK2	Phosphorylation	S1461	0.678	0.687	_ESES(ph)DQEQEEEIDMTSEK_
ANK2	Phosphorylation	S3793	0.342	0.385	_AMIVPSS(ph)PSK_
ANK2	Phosphorylation	S3823	-0.465	-0.203	_GGS(ph)PIIQEPEEPSEHREESSPR_
ANK2	Phosphorylation	T3844		0.389	_T(ph)SLVIVESADNQPETCER_
ANK2	Phosphorylation	S3845	0.659	0.389	_KTS(ph)LVIVESADNQPETCER_
AP1AR	Phosphorylation	T228	0.813	0.785	_SKT(ph)EEDILR_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
CSNK1E	Ubiquitylation	K43		-1.168	_LECVK(gl)TK_
CSNK1E	Ubiquitylation	K45		-1.168	_LECVK(gl)TK_
CSNK1E	Ubiquitylation	K140	-0.969		_DVKPDNFLMGLGK(gl)K_
CSNK1E	Ubiquitylation	K141	-0.969	-0.720	_DVKPDNFLMGLGKK(gl)_
CSNK1E	Phosphorylation	S363	-0.662	-0.352	_IQPAGNTS(ph)PR_
CSNK1E	Phosphorylation	S389	0.394	0.817	_GAPANVS(ph)SSDLTGR_
CTNNA1	Ubiquitylation	K16	-0.194	-0.141	_WDPK(gl)SLEIR_
CTNNA1	Ubiquitylation	K45	-1.131	-0.728	_LLEPLVTQVTTLVNTNSK(gl)GPSNK_
CTNNA1	Ubiquitylation	K120		-0.333	_AAAGEFADDPCSSVK(gl)R_
CTNNA1	Ubiquitylation	K414	0.977		_NGNEK(gl)EVKEYAQVFR_
CTNNA1	Ubiquitylation	K417	0.211		_NGNEK(gl)EVKEYAQVFR_
CTNNA1	Phosphorylation	S641	-0.056	0.089	_TPEELDDS(ph)DFETEDFDVR_
CTNNA1	Phosphorylation	T654	0.808	0.392	_SRT(ph)SVQTEDDQLIAGQSAR_
CTNNA1	Phosphorylation	S655	1.043	0.882	_SRTS(ph)VQTEDDQLIAGQSAR_
CTNNA1	Ubiquitylation	K683	3.760	-0.837	_AIMAQLPQEQKAK(gl)_
CTNNA1	Ubiquitylation	K747		-0.384	_NTSDVISAAK(gl)K_
CTNNA1	Ubiquitylation	K748	-0.083	-0.384	_NTSDVISAAKK(gl)_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DMD	Ubiquitylation	K3317	-0.200	-0.978	_CNICK(gl)ECPIIGFR_
DMD	Phosphorylation	S3623	2.940	0.225	_SDS(ph)SQPMLLR_
DVL2	Ubiquitylation	K343	0.846	-1.366	_DIVHK(gl)PGPIVLTVAK_
EXOC8	Ubiquitylation	K60		0.305	_IQALAEETAQNLK(gl)R_
EXOC8	Ubiquitylation	K268		-0.971	_IFQAENAK(gl)IKR_
EXOC8	Ubiquitylation	K426		0.605	_LGQCTK(gl)ACELFLR_
EYA1	Ubiquitylation	K513		-0.108	_NNVGGLLGPAK(gl)R_
EYA1	Ubiquitylation	K587		-1.219	_IGK(gl)ESCFER_
FRMD6	Phosphorylation	S542	0.558	0.775	_TSTDRHS(ph)LSLDDIR_
ID4	Phosphorylation	S5	-0.437	-0.234	_AVS(ph)PVRPSGR_
LAMTOR1	Ubiquitylation	K20	-0.365	-0.474	_K(gl)LLLDPSSPPTK_
LAMTOR1	Phosphorylation	S27	-0.440	-0.557	_KLLLDPSS(ph)PPTK_
LAMTOR1	Ubiquitylation	K31	-1.467		_KLLLDPSSPPTK(gl)ALNGAEPNYHSLPSAR_
LATS1	Phosphorylation	T246		-2.282	_SVT(ph)PPPPPR_
LATS1	Phosphorylation	T262		-1.011	_GTT(ph)PPPPSWEPNSQTK_
LATS1	Phosphorylation	S278	0.261	0.599	_RYS(ph)GNM(ox)EYVISR_
LATS1	Phosphorylation	S462	-0.408		_S(ph)NSFNNPLGNR_
LATS1	Phosphorylation	S464	0.077	-0.151	_SNS(ph)FNNPLGNR_
LATS1	Phosphorylation	S613	0.270	0.155	_KQITTS(ph)PITVR_
LATS1	Ubiquitylation	K688	0.392		_MLCQK(gl)ESNYIR_
NIPBL	Phosphorylation	S178	0.767	1.039	_NNTAAETEDDES(ph)DGEDRGGGTSGVR_
NIPBL	Phosphorylation	S280	0.496	0.816	_SPQPVCS(ph)PAGSEGTPK_
NIPBL	Phosphorylation	S284	0.172	0.245	_SPQPVCSPAGS(ph)EGTPK_
NIPBL	Phosphorylation	S305	0.703		_GSRPPLILQSQSLPCS(ph)SPR_
NIPBL	Phosphorylation	S306	0.689	0.413	_GSRPPLILQSQSLPCSS(ph)PR_
NIPBL	Phosphorylation	S318	-0.415	-0.625	_DVPPDILLDS(ph)PERK_
NIPBL	Phosphorylation	S349	0.713	0.649	_AAMYDIIS(ph)SPSKDSTK_
NIPBL	Phosphorylation	S350	0.226	0.375	_AAMYDIISS(ph)PSK_
NIPBL	Phosphorylation	S553	2.102	1.878	_VDS(ph)QASITQDSDSIK_
NIPBL	Phosphorylation	T599	0.308		_STPENHPET(ph)PKKK_
NIPBL	Phosphorylation	T713	-0.940	-0.779	_GESRPET(ph)PKQK_
NIPBL	Ubiquitylation	K1628	0.366		_DAVTSK(gl)MDQGSIER_
NIPBL	Phosphorylation	S2658	0.412	0.260	_AITSLLGGGS(ph)PK_
NIPBL	Phosphorylation	S2672	0.868		_NNTAAETEDDES(ph)DGEDRGGGTSGSLR_
OPTN	Ubiquitylation	K448	-0.263	0.596	_QLQMDEMK(gl)QTIAK_
PRKCI	Ubiquitylation	K244	0.289		_ESGK(gl)ASSSLGLQDFDLLR_
PRKCI	Ubiquitylation	K488	-0.090	0.847	_SLSVK(gl)AASVLK_
PRKCZ	Phosphorylation	T560	-0.884	-1.578	_KQALPPFQPQITDDYGLDNFDTQFTSEPVQLT(ph)PDDEDAIKR_
RAB10	Ubiquitylation	K163		0.199	_LLLGNK(gl)CDMEAK_
RAB10	Ubiquitylation	K174	-0.188		_VQK(gl)EQADKLAR_
RAB10	Ubiquitylation	K213	-0.059	0.420	_DILLK(gl)SGGR_
RRAGA	Ubiquitylation	K307	0.056	0.970	_VDGPK(gl)HSLLMR_
RRAGB	Ubiquitylation	K307	0.056	0.970	_VDGPK(gl)HSLLMR_
RRAGC	Phosphorylation	S2		0.163	_(ac)S(ph)LQYGAEETPLAGSYGAADSFPK_
RRAGC	Phosphorylation	S15	0.224	-0.282	_(ac)SLQYGAEETPLAGS(ph)YGAADSFPK_
RRAGC	Ubiquitylation	K80	0.785	0.962	_SSIQK(gl)VVFHK_
RRAGC	Phosphorylation	S95		0.296	_MSPNETLFLES(ph)TNK_
RRAGD	Ubiquitylation	K80	0.785	0.962	_SSIQK(gl)VVFHK_
RRAGD	Phosphorylation	S95		0.296	_MSPNETLFLES(ph)TNK_
SIN3A	Ubiquitylation	K155	0.182		_EFK(gl)SQSIDTPGVISR_
SIN3A	Phosphorylation	T266		-0.572	_VSKPSQLQAHTPASQQT(ph)PPLPPYASPR_
SIN3A	Phosphorylation	S277		-1.598	_S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK_
SIN3A	Phosphorylation	S295		-1.959	_SPPVQPHTPVTISLGTAPS(ph)LQNNQPVEFNHAINYVNK_
SIN3A	Ubiquitylation	K638		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K639		-0.223	_VLEAIQK(gl)K_
SIN3A	Ubiquitylation	K715	1.012		_GFNK(gl)VWR_
SIN3A	Phosphorylation	S832	0.764	0.363	_GDLS(ph)DVEEEEEEEM(ox)DVDEATGAVKK_
SIN3A	Ubiquitylation	K875	0.131	0.003	_LLFSNTAAQK(gl)LR_
SIN3A	Ubiquitylation	K937	-0.224	-0.025	_DK(gl)SDSPAIQLR_
SIN3A	Phosphorylation	S940		-0.107	_DKSDS(ph)PAIQLR_
SIN3A	Phosphorylation	T1111	0.691	0.517	_YM(ox)NSDTT(ph)SPELR_
SIN3A	Phosphorylation	S1112	0.623	0.725	_YM(ox)NSDTTS(ph)PELR_
SLC9A3R1	Ubiquitylation	K50	-1.732		_LVEPGSPAEK(gl)AGLLAGDR_
SLC9A3R1	Ubiquitylation	K101	-2.049		_LLVVDPETDEQLQK(gl)LGVQVR_
SLC9A3R1	Phosphorylation	S280	-0.611	-0.277	_EALAEAALES(ph)PRPALVR_
SLC9A3R1	Phosphorylation	S290	-0.404	-0.401	_SAS(ph)SDTSEELNSQDSPPK_
TP53	Ubiquitylation	K120	-0.188		_LGFLHSGTAK(gl)SVTCTYSPALNK_
TP53	Ubiquitylation	K164	0.157	-1.260	_AMAIYK(gl)QSQHMTEVVR_
TP53	Phosphorylation	S314	-0.695	-1.000	_ALPNNTSS(ph)SPQPK_
TP53	Phosphorylation	S315	-0.762	-0.959	_RALPNNTSSS(ph)PQPK_
TP53	Ubiquitylation	K320	-0.978		_ALPNNTSSSPQPKK(gl)_
TP53	Ubiquitylation	K357	-0.231	-0.823	_ELNEALELKDAQAGK(gl)EPGGSR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_
ZDHHC18	Phosphorylation	S19	-0.793	-0.752	_MKDCEYQQISPGAAPLPAS(ph)PGAR_
ZDHHC18	Ubiquitylation	K378	0.252	-0.053	_AK(gl)PDASMVGGHP_