RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MYO3A	2	-1.560	3.110
EYA4	2	-0.120	0.100
OAT	1	-1.810	3.460	0.655	0.080	-1.716	0.306	0.406
BBS2	1	-0.810	0.820
CLN6	1	0.190	-0.280
WDR36	1	-1.790	3.290	0.311	0.419	0.741	0.265	0.349
RGS16	1	-2.290	4.640
EYA3	1	-0.550	0.440
EYA3	1	-0.550	0.440
ZNF513	1	2.450	-1.420
CACNB2	1	1.170	-1.170
LAMB2	1	-1.480	2.650
COL18A1	1	-1.230	1.530				1.871	0.304
ZIC2	0	0.440	-0.440
MYO9A	0	1.440	-0.970
ABLIM1	0	0.270	-0.170
RABGGTA	0	-0.250	-0.380	-0.737
RP2	0	-0.730	0.030					-0.477
WFS1	0	-0.390	0.420				-0.793	-0.234
GNAT1	0	-0.110	-0.270
GNAT1	0	-0.110	-0.270	-0.166	-0.094	0.032	0.420	0.504
GJA3	0	-0.960	1.080
PPT1	0	1.320	-0.730
GNAT2	0	0.140	-0.880	-0.166	-0.094	0.032	0.420	0.504
PDCL	0	0.050	-0.850
RABGGTB	0	-0.460	0.350
BBS7	0
BBS4	0	0.310	0.160
NOB1	0	1.300	-0.510				0.252	-0.378
PPEF2	0
RPGR	0	0.230	0.370
CNNM4	0	-0.510	0.080				-0.308	0.040
DHRS3	0	0.800	-0.900
BBS5	0	-0.760	-0.060
BBS5	0	-0.090	0.120
BBS5	0	-0.030	0.000
ADGRV1	0	-1.630	2.470
PITPNA	0	0.770	-0.650
BBS10	0	-0.750	1.270
GJC1	0	0.340	-0.120
MYO5A	0	-0.820	1.800				0.524	0.248
OPA1	0	-0.940	1.320		0.057	-0.292
OPA1	0	-0.940	1.320	0.962			0.828	0.737
CHML	0	0.520	-0.400
DNAJC19	0	1.030	-1.100				-0.751

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ABLIM1	Phosphorylation	S216		0.022	_DCLCQLCAQPMSSS(ph)PK_
ABLIM1	Phosphorylation	S352		0.601	_LRPTRTS(ph)SESIYSR_
ABLIM1	Phosphorylation	S431	-0.140	0.041	_TLS(ph)PTPSAEGYQDVR_
ABLIM1	Phosphorylation	S435	-0.245	-0.256	_TLS(ph)PTPS(ph)AEGYQDVR_
ABLIM1	Phosphorylation	S452	0.589	0.925	_STS(ph)QGSINSPVYSR_
ABLIM1	Phosphorylation	S587	0.959	1.394	_RSS(ph)GREEDDEELLR_
ABLIM1	Phosphorylation	S655	0.456	0.590	_TAS(ph)LPGYGR_
ABLIM1	Phosphorylation	S706	-0.408	0.044	_GVS(ph)MPNMLEPK_
ADGRV1	Ubiquitylation	K548		0.402	_LGGTK(gl)GDVR_
ADGRV1	Ubiquitylation	K589		-1.152	_RNDLIFPEQK(gl)TQVTTK_
ADGRV1	Ubiquitylation	K756		0.252	_VNVENQVLK(gl)SGYTSR_
ADGRV1	Ubiquitylation	K1453		-0.536	_SLK(gl)GEAITDGPGILR_
BBS10	Ubiquitylation	K40	-1.233	0.530	_QVLCTK(gl)PTGEVLLSR_
BBS2	Ubiquitylation	K231		-0.482	_FGYALSNGTVGVYDK(gl)TSR_
BBS2	Ubiquitylation	K360		-1.721	_NYEENAK(gl)AELASPLNEADGHR_
BBS2	Phosphorylation	S365		2.366	_AELAS(ph)PLNEADGHR_
BBS2	Ubiquitylation	K659		-0.582	_DLLNGYK(gl)IR_
BBS4	Ubiquitylation	K28		-0.615	_TQFPVSTESQK(gl)PR_
BBS4	Ubiquitylation	K302		-2.331	_YVAAISCLK(gl)R_
BBS4	Ubiquitylation	K408		-2.242	_NALAQYQEMEK(gl)K_
BBS4	Ubiquitylation	K409		-2.242	_NALAQYQEMEK(gl)K_
BBS5	Ubiquitylation	K150		-1.116	_SALIQNK(gl)QLR_
BBS7	Ubiquitylation	K59		-1.507	_KGEAAAVFK(gl)TLPGPK_
BBS7	Ubiquitylation	K479		-0.952	_IQPK(gl)TCQVR_
BBS7	Ubiquitylation	K685		-0.505	_FK(gl)GTNVK_
CACNB2	Phosphorylation	S426	2.503		_S(ph)ASQAEEEPSVEPVK_
CACNB2	Phosphorylation	S428	1.622	0.834	_SAS(ph)QAEEEPSVEPVK_
CHML	Phosphorylation	S649	-0.081	0.975	_NLES(ph)PEKHLQN_
CLN6	Phosphorylation	S63	1.677	1.381	_HGS(ph)VSADEAAR_
CNNM4	Ubiquitylation	K536	0.580		_DFSAFK(gl)DADNELK_
CNNM4	Ubiquitylation	K543	0.092		_DADNELK(gl)VK_
DHRS3	Ubiquitylation	K299	-0.098	0.200	_FSGTYTCMNTFK(gl)GR_
EYA3	Phosphorylation	S266	-1.629		_LSSGDPSTSPSLS(ph)QTTPSKDTDDQSR_
EYA3	Phosphorylation	S297	3.021		_ADATSS(ph)QDSELER_
EYA3	Ubiquitylation	K587		-1.219	_IGK(gl)ESCFER_
EYA4	Phosphorylation	S4	2.607	2.311	_(ac)M(ox)EDS(ph)QDLNEQSVK_
EYA4	Phosphorylation	S367	-1.041	-1.090	_NNPS(ph)PPPDSDLER_
EYA4	Ubiquitylation	K513		-0.108	_NNVGGLLGPAK(gl)R_
EYA4	Ubiquitylation	K587		-1.219	_IGK(gl)ESCFER_
GJA3	Ubiquitylation	K123	-2.265		_ESPSPK(gl)EPPQDNPSSR_
GJC1	Ubiquitylation	K391	0.221	0.458	_SGDGK(gl)TSVWI_
GNAT1	Ubiquitylation	K17	0.320		_ELEK(gl)KLK_
GNAT1	Ubiquitylation	K18	0.320		_ELEK(gl)KLK_
LAMB2	Ubiquitylation	K494		-0.943	_GTVPGSTPCDPNSGSCYCK(gl)R_
LAMB2	Ubiquitylation	K1769		-0.028	_ALESK(gl)AAQLDGLEAR_
MYO3A	Ubiquitylation	K399	2.702		_LYIGSK(gl)R_
MYO5A	Phosphorylation	S600	0.774	0.889	_AIS(ph)PTSATSSGR_
MYO5A	Ubiquitylation	K1232	-1.807		_ALSEK(gl)SAPEVTAPGAPAYR_
MYO5A	Phosphorylation	S1677	0.994	0.878	_TSS(ph)IADEGTYTLDSILR_
MYO9A	Phosphorylation	S1299	0.760	1.145	_SLGGIS(ph)PSEDRR_
MYO9A	Phosphorylation	S1829		0.062	_EFKENKEPS(ph)PK_
MYO9A	Phosphorylation	S2464	-0.455	0.730	_AAS(ph)GNEALGM(ox)EGPLGQTK_
NOB1	Ubiquitylation	K72		0.305	_LVTEFSKK(gl)_
NOB1	Phosphorylation	S184	-0.070	-0.324	_GEDVPS(ph)EEEEEEENGFEDR_
NOB1	Phosphorylation	S201	0.360	0.281	_KDDS(ph)DDDGGGWITPSNIK_
OAT	Ubiquitylation	K151		-1.391	_VLPMNTGVEAGETACK(gl)LAR_
OAT	Ubiquitylation	K374		-1.257	_GK(gl)GLLNAIVIK_
OPA1	Ubiquitylation	K261		0.390	_AAGQYSTSYAQQK(gl)R_
PDCL	Ubiquitylation	K118	-0.750		_ISGK(gl)MTLK_
PITPNA	Ubiquitylation	K152	-0.707		_SQVLSK(gl)DYKAEEDPAK_
PPEF2	Phosphorylation	Y466	1.425		_GGGCY(ph)FGPDVTQQLLQKYNMQFLIRS(ph)HECK_
PPEF2	Phosphorylation	S487	1.425		_GGGCY(ph)FGPDVTQQLLQKYNMQFLIRS(ph)HECK_
PPT1	Ubiquitylation	K174		-0.445	_TLNAGAYSK(gl)VVQER_
PPT1	Ubiquitylation	K224		1.077	_NLMALKK(gl)_
PPT1	Ubiquitylation	K253		0.222	_SGQAK(gl)ETIPLQETSLYTQDR_
RABGGTA	Ubiquitylation	K335	-0.075	0.590	_ECVLLK(gl)GR_
RABGGTB	Phosphorylation	T3	-0.133	0.124	_(ac)GT(ph)PQKDVIIK_
RABGGTB	Ubiquitylation	K6	0.069		_(ac)GTPQK(gl)DVIIK_
RGS16	Ubiquitylation	K165		-0.674	_TLMEK(gl)DSYPR_
RGS16	Ubiquitylation	K173		-0.716	_FLK(gl)SPAYR_
RP2	Ubiquitylation	K273	0.275	0.425	_EVSMK(gl)AEDAQR_
RPGR	Phosphorylation	S518	0.494	0.527	_SLKLS(ph)PVQK_
RPGR	Phosphorylation	S961	0.183	0.559	_RVPS(ph)INQK_
WDR36	Ubiquitylation	K446		-1.608	_LPPITK(gl)FAAEEAR_
WDR36	Ubiquitylation	K814	-0.640		_YAAPEQNNDPQQSK(gl)VVNLGVLAQK_
WDR36	Ubiquitylation	K839	0.973		_LEEGLVNNK(gl)YDTALNLLK_
WFS1	Phosphorylation	S32	1.184	1.098	_LNATAS(ph)LEQER_
WFS1	Ubiquitylation	K143		0.703	_EAVK(gl)LLR_
ZIC2	Ubiquitylation	K253	-0.697	0.374	_QQCIK(gl)QELICK_
ZNF513	Phosphorylation	S253	-1.477	-0.499	_PARPPS(ph)PTEQEGAVPR_