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Query: COL18A1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
COL18A1 1 3.705 -1.230 1.530 1.871 0.304

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for COL18A1:


Pubmed-COL18A1 »
Uniprot-COL18A1 »
Biogrid-COL18A1 »
ProteomicsDB-COL18A1 »

Tumorportal-COL18A1 »
COSMIC-COL18A1 »
GenomeRNAi-COL18A1 »
Genecards-COL18A1


Protein-protein Interactions for COL18A1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait APP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C1QL4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C1QTNF9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait COL8A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CRP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DEFA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MMP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MMP9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLOD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTCH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SIAE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TAZ Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in COL18A1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Laminin_G IPR001791 0.06
Category members Collagen IPR008160 0.06
Category members C-type_lectin_fold IPR016187 0.01
Category members ConA-like_lec_gl_sf IPR008985 0
Category members Collagenase_NC10/endostatin IPR010515 0
Category members Frizzled_dom IPR020067 0


Protein complexes (CORUM database) featuring COL18A1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 2853 ITGA5-ITGB1-CAL4A3 complex Database 0.29


Categories featuring COL18A1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members Pathway Pathway_185 PID_ERA_GENOMIC_PATHWAY 0 1.05
Category members GO Category GO:0005198 structural molecule activity Database 0.94
Category members GO Category GO:0042493 response to drug Database 0.66
Category members GO Category GO:0031012 extracellular matrix Database 0.45
Category members GO Category GO:0008285 negative regulation of cell proliferation Database 0.28
Category members GO Category GO:0030198 extracellular matrix organization Database 0.26
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members GO Category GO:0043065 positive regulation of apoptotic process Database 0.26
Category members Pathway Pathway_383 PID_P53_DOWNSTREAM_PATHWAY 0 0.23
Category members GO Category GO:0030574 collagen catabolic process Database 0.2
Category members GO Category GO:0005581 collagen Database 0.19
Category members GO Category GO:0022617 extracellular matrix disassembly Database 0.13
Category members Pathway Pathway_1027 PID_INTEGRIN1_PATHWAY 0 0
Category members Pathway Pathway_186 PID_HNF3A_PATHWAY 0 0
Category members GO Category GO:0001525 angiogenesis Database 0
Category members GO Category GO:0001886 endothelial cell morphogenesis Database 0
Category members GO Category GO:0005604 basement membrane Database 0
Category members GO Category GO:0005788 endoplasmic reticulum lumen Database 0
Category members GO Category GO:0007155 cell adhesion Database 0
Category members GO Category GO:0007601 visual perception Database 0
Category members GO Category GO:0008284 positive regulation of cell proliferation Database 0
Category members GO Category GO:0009887 organ morphogenesis Database 0
Category members GO Category GO:0030335 positive regulation of cell migration Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0051599 response to hydrostatic pressure Database 0


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