bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Category

Results for the Category
collagen catabolic process
(GO:0030574)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
COL18A1 1 -1.230 1.530 1.871 0.304
MMP15 0 1.100 -1.160
CTSD 0 0.580 -0.790 -0.768 -2.790 -0.655 -1.981
PEPD 0 -0.540 1.250
COL4A2 0 -0.170 0.350 -0.692 -0.297
ADAM10 0 1.400 -1.040 -0.111 0.009
FURIN 0 1.280 -0.730
COL6A1 0 0.390 0.000
COL6A2 0 -0.530 0.950
ADAM15 0 -1.250 1.050 -2.965
ADAM17 0 0.520 -0.620
KLK6 0 -0.160 -0.280
ADAM9 0 0.290 -0.290
COL4A1 0 1.810 -1.260 -0.162
COL6A6 0 1.100 -0.870

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
ADAM10 Ubiquitylation K721 -2.406 _LPPPKPLPGTLK(gl)R_
ADAM15 Ubiquitylation K59 -1.920 _K(gl)VLQTSLPEPLR_
ADAM15 Ubiquitylation K729 -0.467 -0.591 _LCQLK(gl)GPTCQYR_
ADAM17 Phosphorylation S791 -0.594 0.152 _S(ph)FEDLTDHPVTR_
ADAM9 Ubiquitylation K741 0.269 0.229 _SQTYESDGK(gl)NQANPSRQPGSVPR_
ADAM9 Phosphorylation S758 -0.375 -0.893 _HVS(ph)PVTPPR_
ADAM9 Phosphorylation T761 -0.724 -0.397 _HVSPVT(ph)PPREVPIYANR_
ADAM9 Ubiquitylation K781 -2.213 _FAVPTYAAK(gl)QPQQFPSRPPPPQPK_
COL6A1 Ubiquitylation K121 -0.573 0.917 _SSVDAVK(gl)YFGK_
COL6A1 Ubiquitylation K135 1.185 _GTYTDCAIKK(gl)_
COL6A2 Ubiquitylation K120 0.009 _ASFIK(gl)NLQGISSFR_
COL6A2 Ubiquitylation K197 -0.738 _LFAVAPNQNLK(gl)EQGLR_
COL6A2 Ubiquitylation K851 -0.451 _LGEQNFHK(gl)AR_
COL6A6 Ubiquitylation K2218 0.074 _EDVLQKAK(gl)_
FURIN Ubiquitylation K789 -1.074 -0.470 _TAFIK(gl)DQSAL_
MMP15 Phosphorylation S589 -0.195 _WPDVARPPFNPHGGAEPGADS(ph)AEGDVGDGDGDFGAGVNK_
MMP15 Ubiquitylation K662 0.150 0.485 _VLLYCK(gl)R_
PEPD Ubiquitylation K200 -0.011 _YTNK(gl)ISSEAHR_
PEPD Ubiquitylation K211 -0.294 _EVMK(gl)AVK_


© Copyright Svejstrup Laboratory 2015