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Query: COL4A1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
COL4A1 0 -0.162 1.810 -1.260 -0.162

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for COL4A1:


Pubmed-COL4A1 »
Uniprot-COL4A1 »
Biogrid-COL4A1 »
ProteomicsDB-COL4A1 »

Tumorportal-COL4A1 »
COSMIC-COL4A1 »
GenomeRNAi-COL4A1 »
Genecards-COL4A1


Protein-protein Interactions for COL4A1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDC26 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIFAP3 Cat. description Hein, Mann, Cell 2015
Category members IP bait GLT25D2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MMP2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MMP9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLOD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TINAG Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in COL4A1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Collagen IPR008160 0.06
Category members Collagen_VI_NC IPR001442 0.05
Category members C-type_lectin_fold IPR016187 0.01


Protein complexes (CORUM database) featuring COL4A1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring COL4A1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members Pathway Pathway_595 KEGG_FOCAL_ADHESION 0 1.08
Category members Pathway Pathway_673 REACTOME_AXON_GUIDANCE 0 1.06
Category members GO Category GO:0005201 extracellular matrix structural constituent Database 0.55
Category members GO Category GO:0031012 extracellular matrix Database 0.45
Category members Pathway Pathway_247 REACTOME_SIGNALING_BY_PDGF 0 0.4
Category members Pathway Pathway_42 REACTOME_DEVELOPMENTAL_BIOLOGY 0 0.32
Category members Disease phenotype Walker-Warburg_syndrome Walker-Warburg syndrome Database 0.3
Category members GO Category GO:0030855 epithelial cell differentiation Database 0.28
Category members GO Category GO:0030198 extracellular matrix organization Database 0.26
Category members GO Category GO:0030574 collagen catabolic process Database 0.2
Category members GO Category GO:0005581 collagen Database 0.19
Category members GO Category GO:0007411 axon guidance Database 0.13
Category members GO Category GO:0022617 extracellular matrix disassembly Database 0.13
Category members Pathway Pathway_415 REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 0 0.09
Category members GO Category GO:0005587 collagen type IV Database 0.05
Category members Pathway Pathway_1009 REACTOME_NCAM1_INTERACTIONS 0 0.04
Category members Pathway Pathway_1241 BIOCARTA_PLATELETAPP_PATHWAY 0 0.04
Category members Pathway Pathway_521 PID_AVB3_INTEGRIN_PATHWAY 0 0.03
Category members Pathway Pathway_1010 REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH 0 0
Category members Pathway Pathway_1027 PID_INTEGRIN1_PATHWAY 0 0
Category members Pathway Pathway_1187 BIOCARTA_ACE2_PATHWAY 0 0
Category members Pathway Pathway_1194 BIOCARTA_AMI_PATHWAY 0 0
Category members Pathway Pathway_1196 BIOCARTA_INTRINSIC_PATHWAY 0 0
Category members Pathway Pathway_1289 BIOCARTA_VITCB_PATHWAY 0 0
Category members Pathway Pathway_24 KEGG_PATHWAYS_IN_CANCER 0 0
Category members Pathway Pathway_283 KEGG_SMALL_CELL_LUNG_CANCER 0 0
Category members Pathway Pathway_414 REACTOME_COLLAGEN_FORMATION 0 0
Category members Pathway Pathway_476 PID_SYNDECAN_1_PATHWAY 0 0
Category members Pathway Pathway_740 PID_INTEGRIN3_PATHWAY 0 0
Category members Pathway Pathway_922 KEGG_ECM_RECEPTOR_INTERACTION 0 0
Category members Pathway Pathway_930 REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS 0 0
Category members Disease phenotype Familial_porencephaly Familial porencephaly Database 0
Category members Disease phenotype Schizencephaly Schizencephaly Database 0
Category members GO Category GO:0001525 angiogenesis Database 0
Category members GO Category GO:0005604 basement membrane Database 0
Category members GO Category GO:0005788 endoplasmic reticulum lumen Database 0
Category members GO Category GO:0007528 neuromuscular junction development Database 0
Category members GO Category GO:0048407 platelet-derived growth factor binding Database 0
Category members GO Category GO:0071230 cellular response to amino acid stimulus Database 0


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