RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
DNMT1	2	0.150	-0.150		0.077	-0.109	-1.422	0.572
DNMT1	2	0.150	-0.150	0.134			-0.347	-0.054
IPO5	1	-0.900	0.900		0.414	-0.283
IPO5	1	-0.900	0.900	-0.176			0.413	0.268
LAMTOR1	1	0.700	-0.850	0.343			0.382
RRAGD	0	-0.870	0.980
RRAGD	0	-0.870	0.980
CDH1	0	0.150	0.280	-0.623
RRAGB	0	1.330	-0.980	0.176
DNMT3B	0	0.990	-0.100				0.783	0.015
LAMTOR3	0	0.150	0.120				-0.396	0.095
CPEB4	0	0.610	-0.360
RRAGC	0	-0.530	0.100
RRAGC	0	-0.530	0.100
SH3BP4	0	-0.080	0.600
RPTOR	0	0.520	-1.030				0.623	0.466
COL6A1	0	0.390	0.000
ZEB1	0	0.640	-0.450
ZEB1	0	0.640	-0.450
RRAGA	0	-0.490	0.890	0.176
CAPN2	0	-1.140	1.400			0.314
CAPN2	0	-1.140	1.400	0.522			0.716	-0.611
BCL2L1	0
CEBPB	0	0.400	-0.930
COL4A1	0	1.810	-1.260					-0.162
LAMTOR4	0	-0.850	2.120
LAMTOR4	0	-0.650	1.640

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
BCL2L1	Ubiquitylation	K87	0.026		_EVIPMAAVK(gl)QALR_
CEBPB	Phosphorylation	S231		-0.660	_AYLGYQAVPSGSSGSLSTSSSSS(ph)PPGTPSPADAK_
COL6A1	Ubiquitylation	K121	-0.573	0.917	_SSVDAVK(gl)YFGK_
COL6A1	Ubiquitylation	K135		1.185	_GTYTDCAIKK(gl)_
CPEB4	Phosphorylation	S97		-0.033	_QQLS(ph)PSPGQEAGILPETEK_
DNMT1	Phosphorylation	S127	-0.755	-0.836	_VGM(ox)ADANS(ph)PPKPLSKPR_
DNMT1	Phosphorylation	S143	0.877	0.220	_SKS(ph)DGEAKPEPSPSPR_
DNMT1	Phosphorylation	S152	-0.685	-1.347	_SDGEAKPEPS(ph)PSPR_
DNMT1	Phosphorylation	S154	-1.926	-0.876	_SDGEAKPEPSPS(ph)PR_
DNMT1	Ubiquitylation	K586	1.686	3.368	_DLIK(gl)LAGVTLGQR_
DNMT1	Ubiquitylation	K675	1.267	0.915	_DMVK(gl)FGGSGR_
DNMT1	Phosphorylation	S714	-0.773	-0.554	_EADDDEEVDDNIPEMPS(ph)PKK_
DNMT1	Phosphorylation	S954	-0.318	0.057	_LSS(ph)PVKRPR_
DNMT1	Ubiquitylation	K961	-3.166		_K(gl)EPVDEDLYPEHYR_
DNMT1	Ubiquitylation	K981	-0.298	-1.482	_YSDYIK(gl)GSNLDAPEPYR_
DNMT1	Ubiquitylation	K997	0.042	0.154	_IK(gl)EIFCPK_
DNMT1	Ubiquitylation	K1483	1.983	-0.103	_GVCSCVEAGK(gl)ACDPAAR_
DNMT3B	Ubiquitylation	K597	0.236		_ELGIK(gl)VGK_
DNMT3B	Ubiquitylation	K623	0.433		_HEGNIK(gl)YVNDVR_
IPO5	Ubiquitylation	K436	0.087		_YAACNAVGQMATDFAPGFQK(gl)K_
IPO5	Ubiquitylation	K437	0.087		_YAACNAVGQMATDFAPGFQK(gl)K_
IPO5	Ubiquitylation	K548	1.682		_HIVENAVQK(gl)ELR_
IPO5	Ubiquitylation	K613	0.602	0.935	_MCK(gl)ILGK_
IPO5	Ubiquitylation	K678	1.124		_TAGLEEK(gl)STACQMLVCYAK_
IPO5	Ubiquitylation	K712		-0.098	_LMVPLLK(gl)_
IPO5	Ubiquitylation	K963	-0.210		_TK(gl)ENVNATENCISAVGK_
LAMTOR1	Ubiquitylation	K20	-0.365	-0.474	_K(gl)LLLDPSSPPTK_
LAMTOR1	Phosphorylation	S27	-0.440	-0.557	_KLLLDPSS(ph)PPTK_
LAMTOR1	Ubiquitylation	K31	-1.467		_KLLLDPSSPPTK(gl)ALNGAEPNYHSLPSAR_
LAMTOR4	Ubiquitylation	K64	0.203	0.287	_GMNVPFK(gl)R_
RPTOR	Phosphorylation	S722	0.393	1.196	_SVSS(ph)YGNIR_
RPTOR	Phosphorylation	T857	-0.348		_VLDTSSLT(ph)QSAPAS(ph)PTNK_
RPTOR	Phosphorylation	S859	-0.462	-0.346	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S863	-0.208	-0.001	_VLDTSSLTQS(ph)APAS(ph)PTNK_
RPTOR	Phosphorylation	T865		-0.317	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S877	-0.114	-0.074	_GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK_
RPTOR	Ubiquitylation	K1008		-0.329	_QAQQVIQK(gl)GITR_
RRAGA	Ubiquitylation	K307	0.056	0.970	_VDGPK(gl)HSLLMR_
RRAGB	Ubiquitylation	K307	0.056	0.970	_VDGPK(gl)HSLLMR_
RRAGC	Phosphorylation	S2		0.163	_(ac)S(ph)LQYGAEETPLAGSYGAADSFPK_
RRAGC	Phosphorylation	S15	0.224	-0.282	_(ac)SLQYGAEETPLAGS(ph)YGAADSFPK_
RRAGC	Ubiquitylation	K80	0.785	0.962	_SSIQK(gl)VVFHK_
RRAGC	Phosphorylation	S95		0.296	_MSPNETLFLES(ph)TNK_
RRAGD	Ubiquitylation	K80	0.785	0.962	_SSIQK(gl)VVFHK_
RRAGD	Phosphorylation	S95		0.296	_MSPNETLFLES(ph)TNK_
SH3BP4	Phosphorylation	S131		-0.309	_NSTLSDSGMIDNLPDS(ph)PDEVAK_
SH3BP4	Phosphorylation	S246	0.304	0.661	_SYS(ph)LSELSVLQAK_
ZEB1	Ubiquitylation	K77	0.237		_FTSLK(gl)EHIK_
ZEB1	Ubiquitylation	K398	-0.697	0.131	_SEK(gl)LPEDLTVK_
ZEB1	Phosphorylation	S713	-0.669	-0.753	_NNDQPQSANANEPQDSTVNLQS(ph)PLK_
ZEB1	Phosphorylation	S1025		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_
ZEB1	Phosphorylation	T1026		0.260	_REAEERDS(ph)TEQEEAGPEILSNEHVGAR_