RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
HSP90AA1	3	-0.150	0.150	0.395	1.024	-1.280	0.611	0.460
HSP90AA1	3	0.170	-0.420	0.395	1.024	-1.280	0.611	0.460
PI4KB	2	-1.640	3.640	2.483
VCL	1	0.570	-0.620				2.233	0.870
CASP8	1	1.120	-1.090
TLN1	1	-0.130	0.000	0.807			0.246	0.137
IGF1R	1	-0.490	0.750				1.476	0.714
ILK	1	-1.560	3.680				-0.463	-0.527
PI4KA	1	-1.320	2.600		-0.592	-0.340	-0.400	0.110
PI4KA	1	-0.070	-0.820		-0.592	-0.340	-0.400	0.110
PIK3C2A	0	0.620	-0.690				-0.145	0.459
RHOA	0	-0.510	1.370	-0.485			0.532	0.279
ROCK1	0	-1.420	2.380		-0.112	-0.732
PXN	0	1.020	-0.760
MAPK3	0
RPS6KB1	0	0.850	-0.600
PIK3CA	0
KDR	0	0.860	-0.680
RAC1	0	-0.580	1.580	0.486			-0.364	-0.568
ITGAV	0			-0.297			-0.090	0.262
COL6A1	0	0.390	0.000
COL6A2	0	-0.530	0.950
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
PIK3R1	0	1.910	-1.220				-0.441	0.147
F11R	0	-0.710	0.530				0.514	0.505
IRS1	0
PTPN11	0	-0.210	-0.400	0.644			1.053	0.451
COL4A1	0	1.810	-1.260					-0.162
SRC	0	0.050	0.470	-0.031

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
CASP8	Ubiquitylation	K183	1.917		_IINDYEEFSK(gl)ER_
CASP8	Ubiquitylation	K461		-2.031	_NMGK(gl)QMPQPTFTLR_
COL6A1	Ubiquitylation	K121	-0.573	0.917	_SSVDAVK(gl)YFGK_
COL6A1	Ubiquitylation	K135		1.185	_GTYTDCAIKK(gl)_
COL6A2	Ubiquitylation	K120		0.009	_ASFIK(gl)NLQGISSFR_
COL6A2	Ubiquitylation	K197		-0.738	_LFAVAPNQNLK(gl)EQGLR_
COL6A2	Ubiquitylation	K851		-0.451	_LGEQNFHK(gl)AR_
F11R	Phosphorylation	S288	0.335	0.373	_VIYSQPS(ph)AR_
F11R	Ubiquitylation	K296	0.445	0.876	_SEGEFK(gl)QTSSFLV_
HSP90AA1	Ubiquitylation	K69	0.820	-0.090	_YESLTDPSK(gl)LDSGK_
HSP90AA1	Ubiquitylation	K74	0.543		_LDSGK(gl)ELHINLIPNKQDR_
HSP90AA1	Ubiquitylation	K112	1.304	1.601	_ADLINNLGTIAK(gl)SGTK_
HSP90AA1	Ubiquitylation	K185	0.963		_GTK(gl)VILHLK_
HSP90AA1	Ubiquitylation	K208	1.745		_IKEIVK(gl)K_
HSP90AA1	Phosphorylation	S231	2.338	0.649	_DKEVS(ph)DDEAEEK_
HSP90AA1	Phosphorylation	S263	0.095	0.173	_ESEDKPEIEDVGS(ph)DEEEEKK_
HSP90AA1	Ubiquitylation	K281	1.267		_IK(gl)EKYIDQEELNK_
HSP90AA1	Ubiquitylation	K283	1.442	1.226	_EK(gl)YIDQEELNK_
HSP90AA1	Ubiquitylation	K292	-0.237	0.506	_YIDQEELNK(gl)TKPIWTR_
HSP90AA1	Ubiquitylation	K294	0.315	8.646	_TK(gl)PIWTR_
HSP90AA1	Ubiquitylation	K362	0.969	0.946	_NNIK(gl)LYVR_
HSP90AA1	Ubiquitylation	K407	0.827	1.121	_EMLQQSK(gl)ILK_
HSP90AA1	Ubiquitylation	K443	0.820	0.951	_FYEQFSK(gl)NIK_
HSP90AA1	Ubiquitylation	K446	0.314	1.126	_NIK(gl)LGIHEDSQNR_
HSP90AA1	Ubiquitylation	K478	0.799	1.624	_YYTSASGDEM(ox)VSLK(gl)DYCTR_
HSP90AA1	Ubiquitylation	K539	0.353	1.775	_EFEGK(gl)TLVSVTK_
HSP90AA1	Ubiquitylation	K559	-0.316		_EGLELPEDEEEKK(gl)K_
HSP90AA1	Ubiquitylation	K565	0.903		_K(gl)TKFENLCK_
HSP90AA1	Ubiquitylation	K567	0.710		_TK(gl)FENLCK_
HSP90AA1	Ubiquitylation	K576	0.874		_IMK(gl)DILEK_
HSP90AA1	Ubiquitylation	K581	0.540	0.738	_DILEK(gl)KVEK_
HSP90AA1	Ubiquitylation	K582	0.063	0.470	_K(gl)VEKVVVSNR_
HSP90AA1	Ubiquitylation	K615	0.715	0.751	_IMK(gl)AQALR_
HSP90AA1	Ubiquitylation	K631	0.361	0.974	_DNSTMGYMAAK(gl)K_
IGF1R	Ubiquitylation	K47		1.146	_NDYQQLK(gl)R_
IGF1R	Ubiquitylation	K1033	5.779		_VAIK(gl)TVNEAASMR_
IGF1R	Ubiquitylation	K1168	0.191		_K(gl)GGKGLLPVR_
IGF1R	Ubiquitylation	K1171	0.232		_GGK(gl)GLLPVR_
ILK	Ubiquitylation	K85		-0.777	_DIVQK(gl)LLQYK_
ILK	Ubiquitylation	K426		-0.300	_LMK(gl)ICMNEDPAK_
ILK	Ubiquitylation	K435		-2.732	_ICMNEDPAK(gl)RPK_
IRS1	Phosphorylation	S1101	-0.078		_HSS(ph)ETFSSTPSATR_
ITGAV	Ubiquitylation	K233		0.373	_YDPNVYSIK(gl)YNNQLATR_
ITGAV	Ubiquitylation	K360		0.294	_ASGDFQTTK(gl)LNGFEVFAR_
ITGAV	Ubiquitylation	K923		0.636	_GK(gl)SAILYVK_
KDR	Ubiquitylation	K1064		-1.119	_DIYK(gl)DPDYVR_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
PI4KA	Ubiquitylation	K71		-0.660	_SLAVQRPASLEK(gl)VQK_
PI4KA	Ubiquitylation	K124		-1.252	_LLK(gl)GLPK_
PI4KA	Phosphorylation	S275	-0.044	-0.569	_KTS(ph)SVSSISQVSPER_
PI4KA	Phosphorylation	S276	1.031	0.516	_TSS(ph)VSSISQVSPER_
PI4KA	Phosphorylation	S284	0.160	0.431	_TSSVSSISQVS(ph)PER_
PI4KA	Ubiquitylation	K484		-0.723	_LSEK(gl)LQSK_
PI4KA	Ubiquitylation	K1074		-0.689	_ESIVK(gl)DFAAR_
PI4KA	Ubiquitylation	K1152		-1.678	_QNTTLGATQLSERPACVK(gl)K_
PI4KA	Ubiquitylation	K1768	0.311	-0.424	_ITNVSAIIK(gl)PYPK_
PI4KA	Ubiquitylation	K1819		-1.653	_SGTPMQSAAK(gl)APYLAK_
PI4KB	Phosphorylation	S266	-1.800	-1.618	_ELPSLSPAPDTGLS(ph)PSK_
PI4KB	Phosphorylation	S268		-1.249	_RELPSLSPAPDTGLS(ph)PSK_
PI4KB	Phosphorylation	S428	0.388	0.410	_S(ph)VENLPECGITHEQR_
PI4KB	Phosphorylation	S511	1.008	0.749	_RLS(ph)EQLAHTPTAFK_
PIK3C2A	Ubiquitylation	K11	-1.238	-0.061	_(ac)AQISSNSGFK(gl)ECPSSHPEPTR_
PIK3C2A	Ubiquitylation	K112		-0.649	_LLLDDSFETK(gl)K_
PIK3C2A	Ubiquitylation	K113		-0.649	_LLLDDSFETK(gl)K_
PIK3C2A	Phosphorylation	S259	1.013	0.488	_VSNLQVS(ph)PK_
PIK3C2A	Phosphorylation	S338	0.437	0.685	_SQS(ph)LNIR_
PIK3C2A	Ubiquitylation	K674		-0.351	_SPTDCAQSSK(gl)SVK_
PIK3C2A	Phosphorylation	S1553	0.393	0.261	_SADAGSFS(ph)PTPGQIGGAVK_
PIK3CA	Ubiquitylation	K864	0.390	0.588	_NSHTIM(ox)QIQCK(gl)GGLK_
PIK3CA	Ubiquitylation	K868	0.204	0.651	_NSHTIM(ox)QIQCKGGLK(gl)_
PIK3CA	Ubiquitylation	K974	-0.273		_GAQECTK(gl)TREFER_
PTPN11	Ubiquitylation	K124	0.562		_EAEK(gl)LLTEK_
PXN	Phosphorylation	S85	-0.156	0.192	_FIHQQPQSSS(ph)PVYGSSAK_
PXN	Phosphorylation	T136		1.322	_SAEPSPTVMST(ph)SLGSNLSELDR_
PXN	Phosphorylation	S140	-0.291	-0.948	_SAEPSPTVM(ox)STSLGS(ph)NLSELDR_
PXN	Phosphorylation	S302	-0.167		_S(ph)SPGGQDEGGFMAQGK_
PXN	Phosphorylation	S303	-0.167		_S(ph)SPGGQDEGGFMAQGK_
PXN	Phosphorylation	S322	-1.234		_TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK_
RAC1	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RAC1	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RAC1	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RAC1	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RAC1	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RAC1	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RAC1	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RAC1	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RHOA	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOA	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_
ROCK1	Phosphorylation	S1105	-0.245	-0.845	_LLDLSDSTSVAS(ph)FPSADETDGNLPESR_
RPS6KB1	Ubiquitylation	K99		-0.316	_VLGK(gl)GGYGK_
RPS6KB1	Phosphorylation	S447	-0.525	-0.458	_TPVS(ph)PVKFSPGDFWGR_
SRC	Phosphorylation	S17	-0.604	-0.689	_S(ph)LEPAENVHGAGGGAFPASQTPSKPASADGHR_
SRC	Phosphorylation	S75	0.060	0.331	_LFGGFNSSDTVTS(ph)PQR_
TLN1	Ubiquitylation	K334	-0.489	0.561	_LLGITK(gl)ECVM(ox)R_
TLN1	Phosphorylation	S423		0.105	_DHFGLEGDEESTMLEDS(ph)VSPKK_
TLN1	Phosphorylation	S425	-0.366	-0.322	_DHFGLEGDEESTMLEDSVS(ph)PKK_
TLN1	Ubiquitylation	K869	-0.260		_ILADATAK(gl)MVEAAK_
TLN1	Ubiquitylation	K1541	0.365	2.311	_EVANSTANLVK(gl)TIK_
TLN1	Ubiquitylation	K2021	0.309	0.479	_EGILK(gl)TAK_
VCL	Ubiquitylation	K219	-0.376	0.161	_NSK(gl)NQGIEEALK_
VCL	Ubiquitylation	K228		0.195	_NQGIEEALK(gl)NR_
VCL	Phosphorylation	S288		0.364	_DPS(ph)ASPGDAGEQAIR_
VCL	Phosphorylation	S290		-0.415	_DPSAS(ph)PGDAGEQAIR_
VCL	Ubiquitylation	K476	0.572	0.356	_QVATALQNLQTK(gl)TNR_
VCL	Ubiquitylation	K639	0.665	0.718	_AANFENHSGK(gl)LGATAEK_
VCL	Ubiquitylation	K666	0.502		_STVEGIQASVK(gl)TAR_
VCL	Ubiquitylation	K768	0.256		_ILLVAK(gl)R_
VCL	Ubiquitylation	K784	-0.707		_EAVK(gl)AASDELSK_
VCL	Ubiquitylation	K792	-0.889	-1.201	_AASDELSK(gl)TISPMVMDAK_
VCL	Ubiquitylation	K815	-0.780		_AVAGNISDPGLQK(gl)SFLDSGYR_
VCL	Ubiquitylation	K1020	0.159	0.667	_ALIQCAK(gl)DIAK_
VCL	Ubiquitylation	K1070	0.504	0.692	_ILSTVK(gl)ATMLGR_