bioLOGIC-db

bioLOGIC Data

Query: WDR36

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
WDR36	1	4.740	-1.790	3.290	0.311	0.419	0.741	0.265	0.349

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
WDR36	Ubiquitylation	K446		-1.608	_LPPITK(gl)FAAEEAR_
WDR36	Ubiquitylation	K814	-0.640		_YAAPEQNNDPQQSK(gl)VVNLGVLAQK_
WDR36	Ubiquitylation	K839	0.973		_LEEGLVNNK(gl)YDTALNLLK_

ProteomicsDB-WDR36 »

Protein-protein Interactions for WDR36

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait EXOSC1;RP11	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait HNRNPU	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait NOP56	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RRBP1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BBS7	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FBL	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FGF3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait FGF8	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HAVCR2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HSD3B2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MECP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RBM4	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RPL18A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TBL1Y	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait ZNF71	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in WDR36

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	WD40_repeat_dom	IPR017986	1.39
Category members	Quinonprotein_ADH-like_supfam	IPR011047	0.56
Category members	WD40_repeat	IPR001680	0.52

Protein complexes (CORUM database) featuring WDR36

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring WDR36

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005730	nucleolus	Database	13.38
Category members	DDR Literature	pubmedid:19647519	Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation		3.6
Category members	GO Category	GO:0006364	rRNA processing	Database	2.47
Category members	GO Category	GO:0032040	small-subunit processome	Database	0.17
Category members	GO Category	GO:0030516	regulation of axon extension	Database	0.13
Category members	GO Category	GO:0003674	molecular_function	Database	0.08
Category members	GO Category	GO:0001895	retina homeostasis	Database	0
Category members	GO Category	GO:0005575	cellular_component	Database	0
Category members	GO Category	GO:0007601	visual perception	Database	0
Category members	GO Category	GO:0008150	biological_process	Database	0
Category members	GO Category	GO:0050896	response to stimulus	Database	0