RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
NEDD1	2	-0.540	1.020
PHIP	2	0.650	-0.230				0.434	0.305
WDR7	1	-2.050	4.200
WDR36	1	-1.790	3.290	0.311	0.419	0.741	0.265	0.349
FBXW8	1	2.140	-1.050		-0.439	0.088
UTP18	0	-0.730	1.480				-0.233	0.042
STRAP	0	0.490	0.250	1.147	-0.544	-0.436	-0.383	0.218
WDR18	0	0.040	0.190	0.367	-0.599	0.724	0.276	0.222
EML1	0	-0.370	-0.100
KIAA1467	0	0.100	-0.310
EMC1	0	1.890	-0.460				0.476	0.093
PREB	0	0.820	-0.890				-0.364	-0.232
EML4	0	-0.380	-0.100
EML4	0	-0.380	-0.100
EML4	0	-0.380	-0.100	-0.351			0.137	-0.060
EML3	0	-1.410	1.700
AHCTF1	0	-0.530	0.010				0.447	0.316
ITFG3	0	0.620	-0.100					-0.629
EIF2AK3	0	0.010	0.340
PAAF1	0	-0.730	0.680
TBL3	0	-1.370	2.030	0.216	0.205	0.850	0.207	0.445
CFAP44	0	0.530	0.280
PWP2	0	-0.520	0.330		0.374	0.630	0.122	0.387
CFAP57	0	-0.130	-0.440

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AHCTF1	Phosphorylation	S1160	0.346	0.516	_SLPSSSQLKGS(ph)PQAISR_
AHCTF1	Phosphorylation	S1216		-0.315	_STPLASPS(ph)PSPGRSPQR_
AHCTF1	Phosphorylation	S1218	-0.804		_STPLASPSPS(ph)PGRSPQR_
AHCTF1	Phosphorylation	S1222	-1.411	-0.552	_STPLASPSPSPGRS(ph)PQR_
AHCTF1	Phosphorylation	S1283		1.167	_TTSFFLNS(ph)PEKEHQEMDEGSQSLEK_
AHCTF1	Phosphorylation	S1541	0.225	0.046	_NLS(ph)FNELYPSGTLK_
AHCTF1	Phosphorylation	S1944	0.155	0.289	_EVS(ph)PSDVR_
CFAP44	Ubiquitylation	K821	1.200	1.421	_KQLIREK(gl)_
CFAP57	Ubiquitylation	K1073	-0.075		_LLKEK(gl)VR_
EIF2AK3	Phosphorylation	S715		0.832	_EHIEIIAPS(ph)PQR_
EMC1	Ubiquitylation	K52		0.066	_FASLEFSPGSK(gl)K_
EMC1	Ubiquitylation	K53		-0.271	_FASLEFSPGSKK(gl)_
EMC1	Ubiquitylation	K148		1.006	_YIAVLKK(gl)_
EMC1	Ubiquitylation	K986		1.028	_LAQVK(gl)LLNR_
EML1	Phosphorylation	S110		0.851	_KPTGS(ph)LPSPSGVR_
EML1	Phosphorylation	S113	0.220	0.935	_KPTGSLPS(ph)PSGVRK_
EML3	Phosphorylation	S176	0.499	0.430	_AIS(ph)SANLLVR_
EML3	Ubiquitylation	K577	0.622	0.091	_AIAEGLGSELLVGTTK(gl)NALLR_
EML4	Phosphorylation	S7	-0.650	1.378	_(ac)MDGFAGS(ph)LDDSISAASTSDVQDR_
EML4	Phosphorylation	S11		0.559	_(ac)MDGFAGSLDDS(ph)ISAASTSDVQDR_
EML4	Phosphorylation	S16	0.616		_(ac)MDGFAGSLDDSISAAS(ph)TSDVQDR_
EML4	Ubiquitylation	K64	-0.220		_LAISEDHVASVKK(gl)_
EML4	Phosphorylation	S144	-1.107	-0.553	_AS(ph)PSPQPSSQPLQIHR_
EML4	Phosphorylation	S146	-1.217	-0.631	_ASPS(ph)PQPSSQPLQIHR_
EML4	Phosphorylation	T908	-1.723	-1.649	_APVSSTESVIQSNT(ph)PTPPPSQPLNETAEEESR_
ITFG3	Phosphorylation	S21		1.084	_KS(ph)QENLGNPSKNEDNVK_
ITFG3	Ubiquitylation	K30	-0.462	-0.139	_KSQENLGNPSK(gl)NEDNVK_
KIAA1467	Phosphorylation	S62	-1.648	-1.483	_SPLGEAPEPDS(ph)DAEVAEAAKPHLSEVTTEGYPSEPLGGLEQK_
NEDD1	Phosphorylation	S418	2.570	2.332	_SSLGDMFS(ph)PIRDDAVVNK_
NEDD1	Phosphorylation	T522		0.255	_LVTSGAESGNLNT(ph)SPSSNQTR_
NEDD1	Phosphorylation	S523	0.186	0.129	_LVTSGAESGNLNTS(ph)PSSNQTR_
PAAF1	Ubiquitylation	K74	0.219	0.384	_SIHISCPK(gl)ENASSK_
PAAF1	Ubiquitylation	K374	1.282	-0.116	_VATWEK(gl)QIYTCCR_
PHIP	Ubiquitylation	K6	1.214		_K(gl)GLSELR_
PHIP	Ubiquitylation	K65	0.460		_TYQNLVK(gl)YYR_
PHIP	Phosphorylation	S674	0.709	0.567	_LSRGS(ph)ISSTSEVHSPPNVGLR_
PHIP	Ubiquitylation	K767	0.459		_ENK(gl)IPTVSK_
PHIP	Phosphorylation	S911	0.029	-0.103	_VNEEKDGPIS(ph)PKK_
PHIP	Ubiquitylation	K1005	0.642		_EQELMK(gl)IVGIK_
PHIP	Ubiquitylation	K1032	-0.023		_LAFLDPDTGK(gl)LTGGSFTMK_
PHIP	Ubiquitylation	K1062	1.216	0.801	_QQFDDAK(gl)YRR_
PHIP	Phosphorylation	S1315	2.743	1.429	_AQS(ph)YDIQAWKK_
PHIP	Ubiquitylation	K1383	-0.669		_ETLEAGNYESPMELCK(gl)DVR_
PHIP	Phosphorylation	S1525		-0.688	_VVVDPVVTEQPSTSS(ph)AAK_
PHIP	Ubiquitylation	K1528	-0.207		_VVVDPVVTEQPSTSSAAK(gl)TFITK_
PHIP	Ubiquitylation	K1533	1.039		_TFITK(gl)ANASAIPGK_
PHIP	Phosphorylation	S1560	-0.176	0.420	_ALNTLSS(ph)PGQSSFSHGTR_
PHIP	Ubiquitylation	K1602	1.984		_ASTLSK(gl)SSAVIEQGDCK_
PHIP	Phosphorylation	S1651		-0.008	_VEVNTNS(ph)GEIIHK_
PHIP	Phosphorylation	S1783	0.754	0.729	_TAFYNEDDS(ph)EEEQR_
PHIP	Ubiquitylation	K1815	1.427	0.364	_AK(gl)ANLIGW_
PREB	Ubiquitylation	K218		-0.621	_DLK(gl)ASVWQK_
PREB	Ubiquitylation	K272		-1.012	_LFTVQIPHK(gl)R_
PWP2	Ubiquitylation	K59		0.254	_YNVK(gl)CVGLSPDGR_
PWP2	Ubiquitylation	K128	0.137		_GNIAQMYHAPGKK(gl)_
STRAP	Ubiquitylation	K86		0.067	_DATK(gl)AATAAADFTAK_
STRAP	Ubiquitylation	K161	1.190		_EISGHTSGIKK(gl)_
STRAP	Ubiquitylation	K169	0.644		_ALWCSEDK(gl)QILSADDK_
STRAP	Ubiquitylation	K330	-1.279		_CVLPEEDSGELAK(gl)PK_
TBL3	Ubiquitylation	K458	-0.509	0.676	_ALLSK(gl)NTAPDNGPILLQAQTTQR_
TBL3	Ubiquitylation	K593		-0.545	_LWTIK(gl)NNECVR_
TBL3	Ubiquitylation	K664		-0.410	_QQELDNLLHEK(gl)R_
UTP18	Phosphorylation	S121	0.313	0.408	_VQEHEDS(ph)GDSEVENEAK_
UTP18	Phosphorylation	T204	0.181	-0.291	_T(ph)SSDDES(ph)EEDEDDLLQR_
UTP18	Phosphorylation	S205	0.181	-0.106	_T(ph)S(ph)SDDESEEDEDDLLQR_
UTP18	Phosphorylation	S206	0.181	-0.059	_TSS(ph)DDES(ph)EEDEDDLLQR_
UTP18	Phosphorylation	S210	0.110	-0.140	_TSS(ph)DDES(ph)EEDEDDLLQR_
UTP18	Ubiquitylation	K329	1.013		_VLYVYDMLAGK(gl)_
UTP18	Ubiquitylation	K396		-0.714	_VAASTFSSDSKK(gl)_
UTP18	Ubiquitylation	K542		-0.141	_SGYFALGNEK(gl)GK_
WDR18	Ubiquitylation	K263		-1.286	_SFHPEQDAGK(gl)VFK_
WDR18	Ubiquitylation	K301	-0.358	-0.546	_LWDVQSK(gl)QCIR_
WDR18	Ubiquitylation	K432		-0.879	_FITRPAK(gl)_
WDR36	Ubiquitylation	K446		-1.608	_LPPITK(gl)FAAEEAR_
WDR36	Ubiquitylation	K814	-0.640		_YAAPEQNNDPQQSK(gl)VVNLGVLAQK_
WDR36	Ubiquitylation	K839	0.973		_LEEGLVNNK(gl)YDTALNLLK_
WDR7	Phosphorylation	S935	-0.295	-0.257	_ARGS(ph)PPTSSNIVQGQIK_
WDR7	Phosphorylation	T938	-0.319	-0.359	_ARGSPPT(ph)SSNIVQGQIK_
WDR7	Phosphorylation	S1154		0.607	_SSS(ph)QIPEGFGLTSGGSNYSLAR_