bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ABLIM1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ABLIM1 0 2.353 0.270 -0.170

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ABLIM1 Phosphorylation S587 0.959 1.394 _RSS(ph)GREEDDEELLR_
ABLIM1 Phosphorylation S452 0.589 0.925 _STS(ph)QGSINSPVYSR_
ABLIM1 Phosphorylation S352 0.601 _LRPTRTS(ph)SESIYSR_
ABLIM1 Phosphorylation S655 0.456 0.590 _TAS(ph)LPGYGR_
ABLIM1 Phosphorylation S706 -0.408 0.044 _GVS(ph)MPNMLEPK_
ABLIM1 Phosphorylation S431 -0.140 0.041 _TLS(ph)PTPSAEGYQDVR_
ABLIM1 Phosphorylation S216 0.022 _DCLCQLCAQPMSSS(ph)PK_
ABLIM1 Phosphorylation S435 -0.245 -0.256 _TLS(ph)PTPS(ph)AEGYQDVR_

Background Information for ABLIM1:


Pubmed-ABLIM1 »
Uniprot-ABLIM1 »
Biogrid-ABLIM1 »
ProteomicsDB-ABLIM1 »

Tumorportal-ABLIM1 »
COSMIC-ABLIM1 »
GenomeRNAi-ABLIM1 »
Genecards-ABLIM1


Protein-protein Interactions for ABLIM1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ACTB Cat. description Hein, Mann, Cell 2015
Category members IP bait ANLN Cat. description Hein, Mann, Cell 2015
Category members IP bait CALML3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CAPZA2 Cat. description Hein, Mann, Cell 2015
Category members IP bait CDK2 Cat. description Hein, Mann, Cell 2015
Category members IP bait COBLL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait DBN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNA Cat. description Hein, Mann, Cell 2015
Category members IP bait FLNB Cat. description Hein, Mann, Cell 2015
Category members IP bait FLOT2 Cat. description Hein, Mann, Cell 2015
Category members IP bait IQGAP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF1C Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAPRE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH10 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO18A Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO19 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait PDLIM7 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP1CB Cat. description Hein, Mann, Cell 2015
Category members IP bait SEPT9 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNPO Cat. description Hein, Mann, Cell 2015
Category members IP bait TMOD3 Cat. description Hein, Mann, Cell 2015
Category members IP bait TPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait VBP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait ABLIM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BCMO1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CYB5D2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KBTBD5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LIN7C Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MED21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ABLIM1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Villin_headpiece IPR003128 0.03
Category members Znf_LIM IPR001781 0


Protein complexes (CORUM database) featuring ABLIM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ABLIM1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003779 actin binding Database 5.41
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0015629 actin cytoskeleton Database 2.22
Category members Pathway Pathway_673 REACTOME_AXON_GUIDANCE 0 1.06
Category members Pathway Pathway_42 REACTOME_DEVELOPMENTAL_BIOLOGY 0 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members Pathway Pathway_1033 REACTOME_DCC_MEDIATED_ATTRACTIVE_SIGNALING 0 0.14
Category members GO Category GO:0007411 axon guidance Database 0.13
Category members GO Category GO:0045944 positive regulation of transcription from RNA polymerase II promoter Database 0.13
Category members Pathway Pathway_1034 KEGG_AXON_GUIDANCE 0 0.04
Category members Pathway Pathway_692 REACTOME_NETRIN1_SIGNALING 0 0
Category members GO Category GO:0007010 cytoskeleton organization Database 0
Category members GO Category GO:0007601 visual perception Database 0
Category members GO Category GO:0009887 organ morphogenesis Database 0


.

© Copyright Svejstrup Laboratory 2015