bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: OAT

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
OAT 1 1.934 -1.810 3.460 0.655 0.080 -1.716 0.306 0.406

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
OAT Ubiquitylation K374 -1.257 _GK(gl)GLLNAIVIK_
OAT Ubiquitylation K151 -1.391 _VLPMNTGVEAGETACK(gl)LAR_

Background Information for OAT:





Protein-protein Interactions for OAT

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in OAT

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Aminotrans_3 IPR005814 0
Category members PyrdxlP-dep_Trfase IPR015424 0


Protein complexes (CORUM database) featuring OAT

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring OAT

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0034641 cellular nitrogen compound metabolic process Database 0.01
Category members Pathway Pathway_135 KEGG_ARGININE_AND_PROLINE_METABOLISM 0 0.01
Category members Pathway Pathway_17 REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES 0 0
Category members Pathway Pathway_394 REACTOME_AMINO_ACID_SYNTHESIS_AND_INTERCONVERSION_TRANSAMINATION 0 0
Category members GO Category GO:0007601 visual perception Database 0
Category members GO Category GO:0008483 transaminase activity Database 0
Category members GO Category GO:0008652 cellular amino acid biosynthetic process Database 0
Category members GO Category GO:0030170 pyridoxal phosphate binding Database 0
Category members GO Category GO:0034214 protein hexamerization Database 0
Category members GO Category GO:0055129 L-proline biosynthetic process Database 0


© Copyright Svejstrup Laboratory 2015