RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPP1CA	3	2.150	-0.860
PPP1CA	3	2.150	-0.860	-0.250	0.634	0.981	-0.108	0.171
PPM1G	2	-0.190	-0.120	-0.705	0.316	0.971	1.049
PPP1CC	2	0.390	-0.090
PPP1CC	2	0.390	-0.090	0.568	0.526	0.917	-0.533	0.173
DLG1	1	0.400	-0.220	1.552			0.102	0.488
PPP2CB	1	2.210	-0.980	0.194			0.044	0.215
PPP2CB	1	2.210	-0.980		0.650	1.189
DLGAP5	1	-2.380	4.820					-0.852
DUSP9	1	-2.590	5.800
PPP5C	0	-0.140	-0.230	0.937
PPP5C	0	-0.140	-0.230
PHPT1	0	1.160	-0.880
SSH1	0	-0.780	1.560
CDKN3	0	0.480	-0.130
PPM1A	0	-0.680	1.340	0.402
PPM1A	0	-0.680	1.340		-1.556	-0.874
TIMM50	0	0.710	-0.640	0.428	-0.608	-0.459	-1.171	-0.634
PPP3CB	0	-1.240	2.140		-0.298	1.130
PPP3CB	0	-1.240	2.140				0.923	0.537
DUSP3	0	0.360	-0.500
PPM1H	0	-0.220	0.030
PPP2CA	0	0.160	-0.540	0.194			0.044	0.215
PPP2CA	0	0.160	-0.540		0.650	1.189
PPP6C	0	0.340	-0.620	0.715	-0.944	-0.116		0.577
PPP3CC	0	-0.380	1.050		-0.298	1.130
PPP3CC	0	-0.380	1.050				0.923	0.537
PTPN12	0	-0.330	-0.270
DUSP6	0	0.100	0.300
DUSP7	0	-0.270	0.070
CTDSPL2	0	-0.090	0.960				0.296	0.372
PPM1B	0	-0.180	0.420		-0.429	0.307
PPM1B	0	-0.180	0.420	0.248
PPP3CA	0	1.550	-1.230		-0.298	1.130
PPP3CA	0	1.550	-1.230				0.923	0.537
SSH2	0	-0.270	0.300
CTDSPL	0	0.540	-0.790
PPP4C	0	-0.050	0.050	0.322
PPP4R1	0	0.530	-0.450
PPEF2	0
SSU72	0	1.030	-0.450
PPAP2B	0	-0.750	0.840
UBLCP1	0	0.350	-0.640
PTPN11	0	-0.210	-0.400	0.644			1.053	0.451
PPTC7	0	0.140	-0.520
PDXP	0	0.680	-0.250	-2.986
PGAM5	0	-0.280	0.420	-1.333			0.162	-0.092

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CDKN3	Ubiquitylation	K86	-0.893	0.100	_GELSK(gl)YR_
CTDSPL	Ubiquitylation	K190		-0.115	_GNYVK(gl)DLSR_
CTDSPL2	Phosphorylation	T86	-0.976	-0.825	_DIDNNLITST(ph)PR_
CTDSPL2	Ubiquitylation	K95	-0.319		_AGEKPNK(gl)QISR_
DLG1	Phosphorylation	S102	-1.455		_SKPSEPIQPVNTWEISSLPSSTVTSETLPSSLS(ph)PSVEK_
DLG1	Phosphorylation	T115	-0.707	-1.378	_YQDEDT(ph)PPQEHISPQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S122		-1.073	_YQDEDTPPQEHIS(ph)PQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S158		0.773	_NLSEIENVHGFVSHSHIS(ph)PIK_
DLG1	Ubiquitylation	K321	1.264	1.435	_IMEIK(gl)LIK_
DLG1	Ubiquitylation	K361	0.180		_IIEGGAAHK(gl)DGK_
DLG1	Ubiquitylation	K452	-0.704		_YSPVSK(gl)AVLGDDEITREPR_
DLG1	Ubiquitylation	K556	0.105		_FEAK(gl)IHDLR_
DLG1	Phosphorylation	S573	0.697		_EQM(ox)M(ox)NSSISSGS(ph)GSLR_
DLG1	Phosphorylation	S575	0.255	0.729	_EQMMNSSISSGSGS(ph)LR_
DLG1	Ubiquitylation	K843	1.259		_SMENIMEMNK(gl)R_
DLGAP5	Phosphorylation	T661		-0.604	_NEMGIPQQTT(ph)SPENAGPQNTK_
DLGAP5	Phosphorylation	S662	-1.032	-0.577	_NEMGIPQQTTS(ph)PENAGPQNTK_
DLGAP5	Phosphorylation	S689	-0.077	-0.102	_S(ph)SIEDAQCPGLPDLIEENHVVNK_
DLGAP5	Phosphorylation	S690	-0.077	-0.395	_S(ph)SIEDAQCPGLPDLIEENHVVNK_
DLGAP5	Phosphorylation	S774		1.237	_NTAS(ph)QNSILEEGETK_
DLGAP5	Phosphorylation	S806		0.216	_SLTTECHLLDS(ph)PGLNCSNPFTQLER_
DUSP3	Ubiquitylation	K116	-0.586		_AADFIDQALAQK(gl)NGR_
DUSP6	Phosphorylation	S328	0.484	0.292	_SNIS(ph)PNFNFMGQLLDFER_
DUSP7	Phosphorylation	S328	0.484	0.292	_SNIS(ph)PNFNFMGQLLDFER_
DUSP9	Phosphorylation	S328	0.484	0.292	_SNIS(ph)PNFNFMGQLLDFER_
PGAM5	Ubiquitylation	K88	-0.544	0.311	_NVESGEEELASK(gl)LDHYK_
PGAM5	Ubiquitylation	K141	-0.419	0.750	_LASLGLK(gl)FNK_
PHPT1	Ubiquitylation	K41		-0.457	_SGAPAAESK(gl)EIVR_
PHPT1	Ubiquitylation	K59	0.288	0.409	_WAEYHADIYDK(gl)VSGDMQK_
PPAP2B	Ubiquitylation	K5	0.619	0.462	_(ac)MQNYK(gl)YDK_
PPAP2B	Ubiquitylation	K8	0.265	0.647	_YDK(gl)AIVPESK_
PPAP2B	Ubiquitylation	K15	-0.741	-0.668	_AIVPESK(gl)NGGSPALNNNPR_
PPEF2	Phosphorylation	Y466	1.425		_GGGCY(ph)FGPDVTQQLLQKYNMQFLIRS(ph)HECK_
PPEF2	Phosphorylation	S487	1.425		_GGGCY(ph)FGPDVTQQLLQKYNMQFLIRS(ph)HECK_
PPM1A	Ubiquitylation	K278		-0.176	_VCNEVVDTCLYK(gl)GSR_
PPM1B	Ubiquitylation	K90	-0.117		_AAGK(gl)SGSALELSVENVK_
PPM1G	Phosphorylation	S183	2.866	2.103	_SGGGTGEEPGS(ph)QGLNGEAGPEDSTR_
PPM1G	Ubiquitylation	K209	-1.051	-0.856	_ETPSQENGPTAK(gl)AYTGFSSNSER_
PPM1G	Ubiquitylation	K247	-2.531		_GTEAGQVGEPGIPTGEAGPSCSSASDK(gl)LPR_
PPM1G	Ubiquitylation	K339	-0.202	0.936	_GK(gl)QLIVANAGDSR_
PPM1G	Ubiquitylation	K383	0.075	0.659	_NAGGK(gl)VTMDGR_
PPM1G	Ubiquitylation	K519	-0.336	-0.692	_NTAELQPESGK(gl)R_
PPM1H	Phosphorylation	S123	0.026		_RS(ph)SLPNGEGLQLK_
PPP1CA	Ubiquitylation	K6	0.594	0.414	_(ac)SDSEK(gl)LNLDSIIGR_
PPP1CA	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CA	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CA	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CA	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CA	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Ubiquitylation	K35	-0.280	-0.504	_GSKPGK(gl)NVQLQENEIR_
PPP1CC	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CC	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CC	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CC	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CC	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Phosphorylation	T320		-0.561	_KPNATRPVT(ph)PPR_
PPP1CC	Ubiquitylation	K328	0.848	0.425	_GMITK(gl)QAK_
PPP2CA	Ubiquitylation	K4	-0.788	-0.378	_(ac)MDDK(gl)AFTK_
PPP2CA	Ubiquitylation	K4	-0.450	-0.016	_(ac)M(ox)DEK(gl)VFTK_
PPP2CA	Ubiquitylation	K8	-0.522		_VFTK(gl)ELDQWIEQLNECK_
PPP2CA	Ubiquitylation	K21	-1.370		_ELDQWVEQLNECK(gl)QLNENQVR_
PPP2CA	Ubiquitylation	K21	-1.106		_ELDQWIEQLNECK(gl)QLSESQVK_
PPP2CA	Ubiquitylation	K29	0.211	0.122	_QLSESQVK(gl)SLCEK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CA	Ubiquitylation	K41	-0.049	0.003	_EILTK(gl)ESNVQEVR_
PPP2CA	Ubiquitylation	K74	-0.316	-0.316	_IGGK(gl)SPDTNYLFMGDYVDR_
PPP2CB	Ubiquitylation	K4	-0.788	-0.378	_(ac)MDDK(gl)AFTK_
PPP2CB	Ubiquitylation	K4	-0.450	-0.016	_(ac)M(ox)DEK(gl)VFTK_
PPP2CB	Ubiquitylation	K8	-0.522		_VFTK(gl)ELDQWIEQLNECK_
PPP2CB	Ubiquitylation	K21	-1.370		_ELDQWVEQLNECK(gl)QLNENQVR_
PPP2CB	Ubiquitylation	K21	-1.106		_ELDQWIEQLNECK(gl)QLSESQVK_
PPP2CB	Ubiquitylation	K29	0.211	0.122	_QLSESQVK(gl)SLCEK_
PPP2CB	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CB	Ubiquitylation	K36	-0.455	0.187	_AK(gl)EILTK_
PPP2CB	Ubiquitylation	K41	-0.049	0.003	_EILTK(gl)ESNVQEVR_
PPP2CB	Ubiquitylation	K74	-0.316	-0.316	_IGGK(gl)SPDTNYLFMGDYVDR_
PPP3CA	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CA	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CA	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CA	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP3CB	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CB	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CB	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CB	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP3CC	Ubiquitylation	K32	-0.137		_LTAK(gl)EVFDNDGKPR_
PPP3CC	Ubiquitylation	K56		0.132	_VDVLK(gl)NHLVK_
PPP3CC	Ubiquitylation	K323		0.705	_AAVLK(gl)YENNVMNIR_
PPP3CC	Ubiquitylation	K405		0.078	_AIGK(gl)MAR_
PPP4C	Ubiquitylation	K26	-0.494	-0.192	_ESEVK(gl)ALCAK(gl)AR_
PPP4C	Ubiquitylation	K31	-0.607	0.349	_ESEVK(gl)ALCAK(gl)AR_
PPP4C	Ubiquitylation	K133		-0.603	_K(gl)YGSVTVWR_
PPP4R1	Ubiquitylation	K887	0.143		_VLLAK(gl)TLR_
PPP5C	Ubiquitylation	K42	-0.703		_AK(gl)DYENAIK_
PPP6C	Ubiquitylation	K25		-0.474	_YLPENDLK(gl)R_
PPTC7	Ubiquitylation	K242		-0.914	_LK(gl)NSNYESIQQTAR_
PTPN11	Ubiquitylation	K124	0.562		_EAEK(gl)LLTEK_
PTPN12	Phosphorylation	S571	-1.186	-0.973	_TVSLTPS(ph)PTTQVETPDLVDHDNTSPLFR_
PTPN12	Phosphorylation	S588	-1.129	-1.279	_TVSLTPSPTTQVETPDLVDHDNTS(ph)PLFR_
PTPN12	Phosphorylation	S673	-0.767	-0.786	_DVDVSEDS(ph)PPPLPER_
SSH1	Phosphorylation	S937	0.799	0.728	_SSS(ph)SDSIHSVR_
SSH2	Phosphorylation	S514	0.350	0.184	_DITTS(ph)ADQIAEVK_
SSU72	Ubiquitylation	K28	-0.190	0.633	_SMEAHNILSK(gl)R_
TIMM50	Ubiquitylation	K167		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K168		-0.380	_AQGPQQQPGSEGPSYAK(gl)K_
TIMM50	Ubiquitylation	K353		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K354		-0.109	_VVVVDCK(gl)K_
TIMM50	Ubiquitylation	K434		0.302	_LAELSK(gl)SNK_
TIMM50	Ubiquitylation	K437	0.101	-0.071	_SNK(gl)QNLFLGSLTSR_
UBLCP1	Ubiquitylation	K65	-0.075		_LGALK(gl)LKPNTK_
UBLCP1	Ubiquitylation	K246	-0.551	-0.248	_FSEFYSKK(gl)_