RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
BCKDHB	2	2.810	-1.310		0.793	-0.857	1.621
PCK2	2	0.680	-0.790	-0.618	1.207	-2.619	1.882	1.706
CCND1	1	-1.820	3.470
KRAS	1	-0.510	0.620				1.031	0.887
KRAS	1	-0.510	0.620				0.246	-0.346
ANXA1	1	1.050	-0.850				1.883
PAM	1	0.410	-0.620
MAP2K1	1	-1.590	2.780
GBA	1	-1.380	2.580	0.407			0.357	0.150
BAD	0	-0.660	1.190
CPS1	0	-0.030	-0.030
FAS	0	1.380	-1.070
FAS	0	1.380	-1.070
PTPRU	0	0.620	0.040
RHOA	0	-0.510	1.370	-0.485			0.532	0.279
EP300	0	-1.210	1.320	-1.089			-1.694	-0.723
RPS6KB1	0	0.850	-0.600
ALDH3A1	0	-0.830	1.130	0.189	-0.686	-0.332	0.525	-0.106
GOT1	0	-0.320	0.110
DUSP1	0	0.290	-0.100
CDKN1A	0	1.080	-0.750
CDO1	0	-0.540	0.620
IL1RN	0	-0.390	0.260					-3.729
BMP6	0	1.970	-0.630
PPARGC1B	0	0.740	-0.460
AGL	0	0.770	-1.020	0.022	-1.155
ABCA3	0	-0.670	0.640
ADAM9	0	0.290	-0.290
BCL2	0	0.910	-0.740
TYMS	0	-1.190	1.570

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ABCA3	Ubiquitylation	K81		-0.627	_NYTLQK(gl)R_
ABCA3	Ubiquitylation	K305		-0.010	_LTVTIK(gl)R_
ABCA3	Ubiquitylation	K507	-0.904	-0.640	_AVAGK(gl)EEEDSDPEK_
ABCA3	Ubiquitylation	K1092		-0.188	_SALQAAK(gl)DQFNEGR_
ABCA3	Ubiquitylation	K1672		0.589	_VFGILEK(gl)AK_
ABCA3	Ubiquitylation	K1674	0.053	-0.096	_VFGILEKAK(gl)_
ADAM9	Ubiquitylation	K741	0.269	0.229	_SQTYESDGK(gl)NQANPSRQPGSVPR_
ADAM9	Phosphorylation	S758	-0.375	-0.893	_HVS(ph)PVTPPR_
ADAM9	Phosphorylation	T761	-0.724	-0.397	_HVSPVT(ph)PPREVPIYANR_
ADAM9	Ubiquitylation	K781	-2.213		_FAVPTYAAK(gl)QPQQFPSRPPPPQPK_
BAD	Phosphorylation	S74	-0.904	-0.452	_HS(ph)SYPAGTEDDEGM(ox)GEEPSPFR_
BAD	Phosphorylation	S75	-0.914	-0.660	_HSS(ph)YPAGTEDDEGMGEEPSPFR_
BAD	Phosphorylation	S97		0.056	_S(ph)RSAPPNLWAAQR_
BAD	Phosphorylation	S99	-0.299	0.161	_S(ph)APPNLWAAQR_
BAD	Phosphorylation	S118	1.277	1.089	_RM(ox)S(ph)DEFVDSFKK_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
BMP6	Ubiquitylation	K409		-1.025	_VSSASDYNSSELK(gl)TACR_
CCND1	Ubiquitylation	K33		-0.490	_AMLK(gl)AEETCAPSVSYFK_
CCND1	Ubiquitylation	K46	-1.016	-0.036	_AEETCAPSVSYFK(gl)CVQK_
CCND1	Ubiquitylation	K95	-0.733	-0.137	_FLSLEPVK(gl)K_
CCND1	Ubiquitylation	K96	-0.846	-0.155	_FLSLEPVKK(gl)_
CCND1	Ubiquitylation	K238		0.245	_VIK(gl)CDPDCLR_
CDKN1A	Ubiquitylation	K188	-2.505	-1.077	_QTSMTDFYHSK(gl)R_
CDO1	Ubiquitylation	K8	-2.513	-0.979	_(ac)MEQTEVLK(gl)PR_
CPS1	Phosphorylation	S1278	-0.511	-1.077	_ASRSFPFVS(ph)K_
DUSP1	Ubiquitylation	K97		-0.523	_SAALDGAK(gl)R_
EP300	Phosphorylation	S1038	-0.672	-0.349	_TEIKEEEDQPSTSATQSS(ph)PAPGQSK_
EP300	Phosphorylation	S1726	0.994	0.627	_LGLGLDDESNNQQAAATQS(ph)PGDSRR_
EP300	Phosphorylation	S2328	-1.092	0.725	_PQSQPPHSSPS(ph)PR_
FAS	Phosphorylation	S236	-0.027		_ENQGS(ph)HESPTLNPETVAINLSDVDLSK_
FAS	Phosphorylation	S239	0.266		_ENQGSHES(ph)PTLNPETVAINLSDVDLSK_
FAS	Ubiquitylation	K343	1.126		_IQTIILK(gl)DITSDSENSNFR_
GOT1	Ubiquitylation	K97		-0.580	_LALGDDSPALK(gl)EK_
KRAS	Ubiquitylation	K128	1.528	1.433	_TVDTK(gl)QAHELAK_
KRAS	Ubiquitylation	K235	0.591	0.087	_TVDTK(gl)QAQDLAR_
KRAS	Ubiquitylation	K254	-0.450	-0.156	_SYGIPFIETSAK(gl)TR_
MAP2K1	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K1	Phosphorylation	S385		0.066	_RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV_
MAP2K1	Phosphorylation	T386		0.377	_RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV_
PAM	Ubiquitylation	K716		-1.381	_TDTK(gl)EFVR_
PAM	Phosphorylation	S918	0.585	1.654	_GKGS(ph)GGLNLGNFFASR_
PPARGC1B	Phosphorylation	S524		0.617	_ELGS(ph)PTDEDSGQDQQLLR_
PTPRU	Phosphorylation	S853	-0.196	-0.039	_SGGVTEASSLLGGS(ph)PR_
RHOA	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOA	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_
RPS6KB1	Ubiquitylation	K99		-0.316	_VLGK(gl)GGYGK_
RPS6KB1	Phosphorylation	S447	-0.525	-0.458	_TPVS(ph)PVKFSPGDFWGR_
TYMS	Ubiquitylation	K99		-0.992	_GSTNAK(gl)ELSSK_
TYMS	Ubiquitylation	K104		-0.543	_ELSSK(gl)GVK_
TYMS	Ubiquitylation	K169	-0.801	-0.836	_VIDTIK(gl)TNPDDRR_