RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CASP8	1	1.120	-1.090
TRAF2	1	-0.570	0.540
TRAF2	1	-0.570	0.540
RAF1	1	2.020	-1.230
EIF2A	1	-0.180	-0.460	-0.199			-1.243	-0.618
AIFM1	1	1.570	0.130	0.210	0.652	-1.014	0.280	0.386
MAP2K1	1	-1.590	2.780
PAWR	1	-0.550	-0.030				0.396	2.290
PDGFA	1	0.190	-0.340		-2.109	1.885
BAD	0	-0.660	1.190
EIF2AK2	0	-1.060	1.180	-0.657		-0.502	0.213	-0.027
MAP2K4	0	-0.300	0.320
TNFRSF1A	0	-0.590	0.470
PRKCZ	0	-0.290	0.310
MAP4K4	0	-0.500	0.030	0.038			0.092	0.062
MAP4K4	0	-0.500	0.030
BAX	0	1.590	-1.170				0.811	0.359
MAP3K1	0	0.750	-1.270
MAPK3	0
ASAH1	0	-0.300	0.340
NFKB1	0	0.720	-0.810
MADD	0	0.620	-1.050
CTSD	0	0.580	-0.790	-0.768		-2.790	-0.655	-1.981
MAP2K2	0	-0.610	0.080
MAP2K2	0	-0.610	0.080
MYC	0	0.170	0.550	-2.443	-0.949	-0.454		-1.290
RIPK1	0	-0.190	0.440
RB1	0	1.180	-1.070		0.429	0.755
RB1	0	1.180	-1.070
KSR1	0	0.100	0.600
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
PRKCD	0	0.250	0.070				0.578	0.427
BCL2	0	0.910	-0.740
CYCS	0	-0.020	-0.350				0.711	0.320
RELA	0	-1.130	1.600	0.793
PRKRA	0	-1.380	2.380				0.767	0.127

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AIFM1	Ubiquitylation	K111	1.676		_ISGLGLTPEQKQK(gl)_
AIFM1	Ubiquitylation	K518	-0.545	-0.262	_ATAQDNPK(gl)SATEQSGTGIR_
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
ASAH1	Ubiquitylation	K461		0.139	_ESLDVYELDAK(gl)QGR_
BAD	Phosphorylation	S74	-0.904	-0.452	_HS(ph)SYPAGTEDDEGM(ox)GEEPSPFR_
BAD	Phosphorylation	S75	-0.914	-0.660	_HSS(ph)YPAGTEDDEGMGEEPSPFR_
BAD	Phosphorylation	S97		0.056	_S(ph)RSAPPNLWAAQR_
BAD	Phosphorylation	S99	-0.299	0.161	_S(ph)APPNLWAAQR_
BAD	Phosphorylation	S118	1.277	1.089	_RM(ox)S(ph)DEFVDSFKK_
BAX	Ubiquitylation	K57		-1.174	_MGGEAPELALDPVPQDASTK(gl)K_
BAX	Ubiquitylation	K58	-1.718	-1.174	_MGGEAPELALDPVPQDASTKK(gl)_
BAX	Ubiquitylation	K64	0.708	1.306	_LSECLK(gl)R_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
CASP8	Ubiquitylation	K183	1.917		_IINDYEEFSK(gl)ER_
CASP8	Ubiquitylation	K461		-2.031	_NMGK(gl)QMPQPTFTLR_
CYCS	Ubiquitylation	K40		-2.265	_K(gl)TGQAPGYSYTAANK(gl)NK_
CYCS	Ubiquitylation	K54	-0.872	-1.922	_K(gl)TGQAPGYSYTAANK(gl)NK_
CYCS	Ubiquitylation	K56	-0.872	-1.922	_TGQAPGYSYTAANKNK(gl)_
CYCS	Ubiquitylation	K101		-1.859	_ADLIAYLKK(gl)_
EIF2A	Ubiquitylation	K40		7.150	_NCK(gl)VCIFSK_
EIF2A	Phosphorylation	S503	-0.843	-0.645	_S(ph)DKSPDLAPTPAPQSTPR_
EIF2A	Phosphorylation	S506	-0.882	-0.939	_SDKS(ph)PDLAPTPAPQSTPR_
EIF2AK2	Phosphorylation	S83		0.256	_KAVS(ph)PLLLTTTNSSEGLSMGNYIGLINR_
KSR1	Phosphorylation	S334		0.052	_FDLSHGS(ph)PQMVR_
KSR1	Phosphorylation	S406	-0.052	-0.067	_RTES(ph)VPSDINNPVDR_
KSR1	Phosphorylation	S569	-0.413	-0.383	_ADVLEAHEAEAEEPEAGKS(ph)EAEDDEDEVDDLPSSR_
MADD	Phosphorylation	S1059	0.390	0.618	_KRS(ph)PTESVNTPVGK_
MADD	Phosphorylation	T1061	0.390	0.682	_KRS(ph)PTESVNTPVGK_
MADD	Phosphorylation	T1237	-0.523	-0.591	_GT(ph)LSDSEIETNSATSTIFGK_
MADD	Phosphorylation	S1239	0.070	-0.211	_GTLS(ph)DSEIETNSATSTIFGK_
MAP2K1	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K1	Phosphorylation	S385		0.066	_RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV_
MAP2K1	Phosphorylation	T386		0.377	_RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV_
MAP2K2	Phosphorylation	S23	0.873	0.258	_RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK_
MAP2K2	Phosphorylation	T25		0.439	_RKPVLPALTINPTIAEGPSPT(ph)SEGASEANLVDLQK_
MAP2K2	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K2	Phosphorylation	S293		-0.361	_ELEAIFGRPVVDGEEGEPHS(ph)ISPR_
MAP2K2	Phosphorylation	S295	-0.234	0.026	_ELEAIFGRPVVDGEEGEPHSIS(ph)PR_
MAP2K2	Phosphorylation	T394	0.570	0.158	_LNQPGT(ph)PTR_
MAP2K4	Phosphorylation	S80		0.441	_LRTHS(ph)IESSGK_
MAP3K1	Phosphorylation	S292		0.209	_RAPS(ph)PDGFSPYSPEETNR_
MAP3K1	Phosphorylation	S506	1.427		_SHDFYSHELS(ph)SPVDSPSSLR_
MAP3K1	Phosphorylation	S507		1.436	_SHDFYSHELSS(ph)PVDSPSSLR_
MAP3K1	Phosphorylation	S923	0.127	-0.120	_LSAS(ph)SEDISER_
MAP4K4	Phosphorylation	T704	0.480	0.190	_T(ph)TSRSPVLSR_
MAP4K4	Phosphorylation	S706	0.353	0.381	_TTS(ph)RSPVLSR_
MAP4K4	Phosphorylation	S708	0.247	0.386	_TTSRS(ph)PVLSR_
MAP4K4	Phosphorylation	S716	0.989	-0.508	_RDS(ph)PLQGSGQQNSQAGQR_
MAP4K4	Phosphorylation	S981	-0.167	-1.787	_KGS(ph)VVNVNPTNTRPQSDTPEIR_
MAPK3	Phosphorylation	Y204	-0.807	-2.487	_IADPEHDHTGFLTEY(ph)VATR_
MAPK3	Ubiquitylation	K289		-0.608	_NYLQSLPSKTK(gl)_
MYC	Phosphorylation	S20	-1.444	-1.145	_PLNVS(ph)FTNR_
MYC	Phosphorylation	T72	-1.699	-1.813	_FELLPT(ph)PPLS(ph)PSRR_
MYC	Phosphorylation	S76	-1.777	-1.435	_FELLPTPPLS(ph)PSR_
MYC	Phosphorylation	S81		0.459	_S(ph)GLCSPSYVAVTPFSLR_
MYC	Phosphorylation	S85	0.199	0.073	_SGLCS(ph)PSYVAVTPFSLR_
MYC	Ubiquitylation	K162	-2.475	-1.259	_LVSEK(gl)LASYQAAR_
MYC	Phosphorylation	S295		-0.903	_SESGS(ph)PSAGGHSKPPHSPLVLK_
MYC	Phosphorylation	S307		-1.486	_SES(ph)GSPSAGGHSKPPHS(ph)PLVLK_
MYC	Ubiquitylation	K340		-2.449	_VK(gl)LDSVR_
MYC	Ubiquitylation	K403		-3.432	_DQIPELENNEK(gl)APK_
NFKB1	Phosphorylation	S907	-0.025	0.113	_TTSQAHSLPLS(ph)PASTR_
PAWR	Ubiquitylation	K227	0.632		_YK(gl)STTSVSEEDVSSR_
PAWR	Phosphorylation	T230	0.494		_STT(ph)SVSEEDVSSR_
PAWR	Phosphorylation	S231	0.126		_STTS(ph)VSEEDVSSR_
PAWR	Phosphorylation	S233	0.241		_STTSVS(ph)EEDVSSR_
PRKCD	Ubiquitylation	K138	-0.141		_SEDEAK(gl)FPTMNR_
PRKCD	Ubiquitylation	K222	0.185	0.658	_DTIFQK(gl)ER_
PRKCD	Phosphorylation	S302	-0.240	-0.222	_S(ph)DSASSEPVGIYQGFEK_
PRKCD	Phosphorylation	S304	0.378	0.289	_RSDS(ph)ASSEPVGIYQGFEK_
PRKCD	Phosphorylation	S506	-0.213	0.200	_AS(ph)TFCGTPDYIAPEILQGLK_
PRKCD	Phosphorylation	T507	-0.149	0.240	_AS(ph)TFCGTPDYIAPEILQGLK_
PRKCD	Ubiquitylation	K641	-2.000		_DYSNFDQEFLNEK(gl)AR_
PRKCD	Phosphorylation	S645	0.577	0.832	_ARLS(ph)YSDK_
PRKCD	Phosphorylation	S647	0.886	0.853	_ARLSYS(ph)DK_
PRKCZ	Phosphorylation	T560	-0.884	-1.578	_KQALPPFQPQITDDYGLDNFDTQFTSEPVQLT(ph)PDDEDAIKR_
PRKRA	Phosphorylation	S18	0.646	0.502	_EDS(ph)GTFSLGK_
PRKRA	Phosphorylation	T20	0.658	0.710	_EDSGT(ph)FSLGK_
RAF1	Phosphorylation	S29	0.028	-0.571	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	T31	0.028	-0.669	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	S244		0.053	_YSTPHAFTFNTSS(ph)PSSEGSLSQR_
RAF1	Phosphorylation	S259	-0.069	0.054	_STS(ph)TPNVHM(ox)VSTTLPVDSR_
RAF1	Phosphorylation	S301		-0.651	_SHSESASPSALSSSPNNLS(ph)PTGWSQPK_
RAF1	Phosphorylation	T303		-0.664	_SHSESASPSALSSSPNNLSPT(ph)GWSQPK_
RAF1	Phosphorylation	S497		-0.449	_SRWS(ph)GSQQVEQPTGSVLWMAPEVIR_
RAF1	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
RAF1	Phosphorylation	S642	-0.197	0.463	_AAHTEDINACTLTTS(ph)PR_
RB1	Phosphorylation	S69	-3.602	-3.397	_TAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR_
RB1	Ubiquitylation	K97	-0.546		_LK(gl)IPDHVR_
RB1	Phosphorylation	T388	0.005	0.116	_TLQTDSIDSFETQRT(ph)PR_
RB1	Phosphorylation	T405	-0.851	-0.901	_KSNLDEEVNVIPPHT(ph)PVR_
RB1	Phosphorylation	S820		-0.019	_S(ph)PYKFPSSPLR_
RB1	Ubiquitylation	K823	-2.214		_SPYK(gl)FPSSPLR_
RB1	Phosphorylation	S827	0.824	0.111	_FPSS(ph)PLR_
RB1	Phosphorylation	S839	-0.701	-1.045	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K842		-0.751	_IPGGNIYISPLK(gl)SPYK_
RB1	Phosphorylation	S843	-0.701	-0.022	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K846	-2.084		_SPYK(gl)ISEGLPTPTK_
RB1	Phosphorylation	T853	0.039	-0.555	_ISEGLPT(ph)PTKM(ox)T(ph)PR_
RB1	Ubiquitylation	K856	-1.350		_ISEGLPTPTK(gl)MTPR_
RB1	Phosphorylation	T858	-0.782	0.564	_ISEGLPT(ph)PTKMT(ph)PR_
RB1	Ubiquitylation	K879	-0.187		_FQK(gl)INQMVCNSDR_
RIPK1	Ubiquitylation	K642	-0.431		_EGIK(gl)GATVGK_
TNFRSF1A	Ubiquitylation	K242		-0.111	_SK(gl)LYSIVCGK_
TRAF2	Phosphorylation	T7	-0.822	-1.190	_(ac)AAASVT(ph)PPGSLELLQPGFSK_
TRAF2	Ubiquitylation	K27	-0.253	2.194	_TLLGTK(gl)LEAK_
TRAF2	Ubiquitylation	K119		0.519	_GTLK(gl)EYESCHEGR_
TRAF2	Ubiquitylation	K176	-1.233	1.022	_APCCGADVK(gl)AHHEVCPK_
TRAF2	Ubiquitylation	K207	0.147	0.918	_FQDHVK(gl)TCGK_
TRAF2	Ubiquitylation	K481	-0.507	0.417	_MEAK(gl)NSYVR_