RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
TRIM9	3	-0.990	0.950
ATF7IP	3	-1.850	4.120
EPHA7	2	2.050	-0.990					0.221
EPHA7	2	2.050	-0.990
INSR	2	-0.850	0.830				1.143	0.785
CNTN1	1	-1.210	1.700				-0.706	2.148
FNDC3B	1	2.250	-0.420				-0.587	0.396
NRCAM	1	0.920	-0.800
FNDC3A	1	0.480	-0.460				-0.044	0.161
FSD1	1	0.210	-0.200					1.661
CHL1	1
IGF1R	1	-0.490	0.750				1.476	0.714
IFNAR1	1	-1.770	3.060
CEP170	1	-1.900	2.200
CEP170	1	0.260	-0.290
CEP170	1	-1.900	2.200	1.218			0.330	-0.062
CEP170	1	0.260	-0.290	1.218			0.330	-0.062
PTPRG	1	0.610	-0.500				1.092	0.353
TTN	1	2.130	-1.190		0.133	0.277	0.244	0.213
TNXB	1	-1.880	3.580
IFNGR1	0	-1.300	2.410
PTPRU	0	0.620	0.040
MYLK	0	-0.520	0.000	0.754
SDK2	0	0.970	-0.790				-0.248
EPHA6	0	-1.140	1.990					0.221
EPHA6	0	-0.490	0.330					0.221
MID2	0	0.370	-0.940				-0.219	0.525
TYRO3	0	0.220	-0.340
MID1	0	0.310	-0.200				-0.219	0.525
PTPRS	0	0.140	0.270				-0.194	0.365
SUSD1	0	-0.520	0.390
LIFR	0	-0.160	0.460
LEPR	0	-0.050	0.330
OBSL1	0	1.180	-0.790			-0.334	0.980
LRFN1	0	1.060	-0.960
EPHB2	0	-0.630	0.780					0.221
EPHB2	0	-0.630	0.780
EPHA2	0	1.330	-0.460					0.221
PTPRF	0	1.070	-0.360				-0.194	0.365
POMGNT2	0	0.720	-0.520				0.650	-0.290
EPHA5	0	-0.280	0.790
SDK1	0	0.740	-0.550				0.074	0.160
MERTK	0	-0.060	0.240
PTPRD	0	-0.450	-0.070				-0.194	0.365
OBSCN	0	-0.680	0.510
OBSCN	0	-0.170	0.030
OBSCN	0	1.520	-0.830
EPHB1	0	-0.220	0.000					0.221
EPHB1	0	-0.220	0.000	-0.042
EPHB1	0	-0.220	0.000
IFNAR2	0	0.700	-0.450
ROBO1	0	-0.180	-0.120
VWA1	0	-1.460	2.160
EPHB3	0	0.800	-0.380					0.221
EPHB3	0	0.800	-0.380
EPOR	0	0.450	-0.350
EPHB4	0	1.130	-1.030

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATF7IP	Phosphorylation	S121	-0.857	-0.856	_NKQDDDLNCEPLS(ph)PHNITPEPVSK_
ATF7IP	Phosphorylation	T126		-0.799	_NKQDDDLNCEPLSPHNIT(ph)PEPVSK_
ATF7IP	Phosphorylation	S453	0.514	0.468	_LAPS(ph)EDELTCFSK_
ATF7IP	Phosphorylation	S481	-0.400		_M(ox)ES(ph)SFGSPSKQESSESLPK_
ATF7IP	Phosphorylation	S482	0.543		_MESS(ph)FGSPSKQESSESLPK_
ATF7IP	Phosphorylation	S485	0.074	0.137	_MESSFGS(ph)PSKQESSESLPK_
ATF7IP	Phosphorylation	S565	2.282	2.014	_S(ph)KSEDMDNVQSK_
ATF7IP	Phosphorylation	S567		1.246	_SKS(ph)EDMDNVQSK_
ATF7IP	Ubiquitylation	K576	-2.103	-0.426	_SKSEDMDNVQSK(gl)R_
ATF7IP	Ubiquitylation	K596	0.047	0.428	_ITAK(gl)GDINQK_
ATF7IP	Ubiquitylation	K602	0.100	0.776	_GDINQK(gl)LQK_
ATF7IP	Phosphorylation	S681		-1.223	_HEHPPNPPVS(ph)PGK_
CEP170	Phosphorylation	S93	-0.958	-0.890	_S(ph)GDPRPQAAEP_
CEP170	Phosphorylation	S356		-0.606	_TEEDSKS(ph)IKSDVPVYLK_
CEP170	Phosphorylation	S446	-0.177	0.083	_S(ph)EEPSVSIPFLQTALLR_
CEP170	Phosphorylation	S450	-0.065	-0.720	_QKSEEPS(ph)VSIPFLQTALLR_
CEP170	Phosphorylation	S466	-0.016	0.353	_SSGS(ph)LGHRPSQEMDK_
CEP170	Phosphorylation	S630	1.206	0.442	_STGS(ph)ATSLASQGER_
CEP170	Phosphorylation	T664	0.702	0.676	_VVT(ph)QRSEIGEK_
CEP170	Phosphorylation	S667		0.551	_VVTQRS(ph)EIGEK_
CEP170	Phosphorylation	S838	-0.635	-0.728	_QGS(ph)FTIEKPSPNIPIELIPHINK_
CEP170	Phosphorylation	S879	0.073	0.440	_S(ph)ESLDPDSSMDTTLILK_
CEP170	Phosphorylation	S881	0.389	0.423	_SES(ph)LDPDSSMDTTLILK_
CEP170	Phosphorylation	S1019	-0.693	-0.831	_IRQPS(ph)VDLTDDDQTSSVPHSAISDIM(ox)SSDQETYSCKPHGR_
CEP170	Phosphorylation	T1023	-1.927	-0.804	_IRQPSVDLT(ph)DDDQTSSVPHSAISDIM(ox)SSDQETYSCKPHGR_
CEP170	Phosphorylation	S1112	1.157	-0.033	_LGEAS(ph)DSELADADK_
CEP170	Phosphorylation	S1247	-0.698		_RFPTDYASTSEDEFGS(ph)NRNSPK_
CEP170	Phosphorylation	S1251	0.698	-0.249	_RFPTDYASTSEDEFGSNRNS(ph)PK_
CEP170	Phosphorylation	T1259	-0.450	-0.149	_LRT(ph)SPALK_
CEP170	Phosphorylation	S1260	-0.536	0.068	_LRTS(ph)PALK_
CEP170	Phosphorylation	S1280	-0.146		_LQSAGSAMPTSSS(ph)FK_
CEP170	Phosphorylation	S1529	-0.172	1.510	_SSPVNNHHS(ph)PGQTPTLGQPEAR_
CHL1	Phosphorylation	T91	4.193		_IIPSNNS(ph)GTFR_
EPHA2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHA2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHA2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHA2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHA2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHA2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHA5	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
EPHA6	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHA6	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHA6	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHA6	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHA6	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHA6	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHA7	Ubiquitylation	K180		0.633	_EIGPLSKK(gl)_
EPHA7	Ubiquitylation	K272		0.520	_AGYQQK(gl)GDTCEPCGR_
EPHA7	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHA7	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHA7	Ubiquitylation	K606	-0.162		_FPGTK(gl)TYIDPETYEDPNR_
EPHA7	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHA7	Ubiquitylation	K634	0.732	1.340	_ELDASCIK(gl)IER_
EPHA7	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHA7	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
EPHA7	Ubiquitylation	K665		3.196	_DVAVAIK(gl)TLK_
EPHA7	Ubiquitylation	K797	-1.229	-0.459	_VIEDDPEAVYTTTGGK(gl)IPVR_
EPHA7	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHA7	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHA7	Phosphorylation	S912		-0.413	_TPLGTCSRPIS(ph)PLLDQNTPDFTTFCSVGEWLQAIK_
EPHB1	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB1	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB1	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB1	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB1	Ubiquitylation	K657	0.533		_LKLPGK(gl)R_
EPHB1	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB1	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHB2	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB2	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB2	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB2	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB2	Phosphorylation	S776	-0.147	-0.171	_FLEDDTS(ph)DPTYTSALGGK_
EPHB2	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB2	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHB3	Ubiquitylation	K578	-0.752	-0.618	_QSPEDVYFSK(gl)SEQLKPLK_
EPHB3	Ubiquitylation	K583	0.445	0.124	_SEQLK(gl)PLK_
EPHB3	Ubiquitylation	K617	0.339		_QK(gl)VIGAGEFGEVYK_
EPHB3	Ubiquitylation	K649	-1.219		_TLK(gl)AGYTEK_
EPHB3	Phosphorylation	S897		0.000	_LPS(ph)TSGSEGVPFR_
EPHB3	Phosphorylation	T898	-0.329	0.424	_LPST(ph)SGSEGVPFR_
EPHB3	Ubiquitylation	K960	0.133		_IGVTLAGHQKK(gl)_
EPHB4	Ubiquitylation	K885	-1.394		_NPASLK(gl)IVAR_
EPHB4	Ubiquitylation	K960	0.133		_IGVTLAGHQKK(gl)_
EPOR	Ubiquitylation	K38		-0.982	_FESK(gl)AALLAAR_
FNDC3A	Phosphorylation	S203	1.581	-0.157	_MSS(ph)PPSSPQK_
FNDC3B	Phosphorylation	S208	-0.021	0.060	_LNS(ph)PPSSIYK_
IFNAR1	Ubiquitylation	K86		-0.259	_LSGCQNITSTK(gl)CNFSSLK_
IFNAR1	Phosphorylation	S495		-0.050	_NLLLSTS(ph)EEQIEK_
IFNAR2	Phosphorylation	S400	-0.542	-0.094	_RKS(ph)PLQDPFPEEDYSSTEGSGGR_
IFNGR1	Ubiquitylation	K299	-0.875	-0.201	_SATLETK(gl)PESK_
IGF1R	Ubiquitylation	K47		1.146	_NDYQQLK(gl)R_
IGF1R	Ubiquitylation	K1033	5.779		_VAIK(gl)TVNEAASMR_
IGF1R	Ubiquitylation	K1168	0.191		_K(gl)GGKGLLPVR_
IGF1R	Ubiquitylation	K1171	0.232		_GGK(gl)GLLPVR_
INSR	Ubiquitylation	K1022	-0.603		_EK(gl)ITLLR_
INSR	Ubiquitylation	K1047	0.305	0.711	_DIIK(gl)GEAETR_
INSR	Ubiquitylation	K1057	0.482	0.484	_VAVK(gl)TVNESASLR_
INSR	Ubiquitylation	K1352	1.606	2.754	_DGGSSLGFK(gl)R_
LEPR	Ubiquitylation	K592		0.126	_MYEVYDAK(gl)SK_
LEPR	Ubiquitylation	K594		0.126	_MYEVYDAK(gl)SK_
LIFR	Ubiquitylation	K886	0.112	0.489	_ALQFQK(gl)SVCEGSSALK_
LRFN1	Phosphorylation	S632	0.559		_AM(ox)EAETAS(ph)AEPEVVLGR_
LRFN1	Phosphorylation	S642		-0.199	_S(ph)LGGSATSLCLLPSEETSGEESR_
LRFN1	Phosphorylation	S646	0.392	0.474	_SLGGS(ph)ATSLCLLPSEETSGEESR_
LRFN1	Phosphorylation	S674	-0.799	-1.058	_S(ph)GALEPPTSAPPTLALVPGGAAAR_
LRFN1	Phosphorylation	S731	-0.080	0.162	_S(ph)TPHLDGAGGGAAGEDGDLGLGSAR_
LRFN1	Phosphorylation	T732	-0.080	0.162	_S(ph)TPHLDGAGGGAAGEDGDLGLGSAR_
MERTK	Ubiquitylation	K856	0.219		_LQLEK(gl)LLESLPDVR_
MID1	Ubiquitylation	K74	0.275	0.651	_GLDGLK(gl)R_
MID1	Phosphorylation	S96	-0.141	0.050	_ASVSGPNS(ph)PSETRR_
MID2	Ubiquitylation	K74	0.275	0.651	_GLDGLK(gl)R_
MID2	Phosphorylation	S96	-0.141	0.050	_ASVSGPNS(ph)PSETRR_
NRCAM	Phosphorylation	S1299		4.018	_KEKEPAEGNESSEAPS(ph)PVNAMNSFV_
OBSCN	Phosphorylation	S1485		1.190	_LSFS(ph)SKVR_
OBSCN	Phosphorylation	S1486	0.964	1.070	_LSFSS(ph)KVR_
OBSL1	Phosphorylation	S10		1.129	_ASSGDQGS(ph)PPCFLR_
OBSL1	Ubiquitylation	K312	-0.172	-0.016	_VLYCQAK(gl)DR_
OBSL1	Ubiquitylation	K337	-0.584	-0.485	_NSAGQTLSAVQLHVK(gl)EPR_
OBSL1	Ubiquitylation	K427	-0.059		_TVANVTVK(gl)GPILK_
PTPRD	Ubiquitylation	K1650	-0.595	-1.027	_LLASSK(gl)AHTSR_
PTPRD	Ubiquitylation	K1665	-0.790		_FISANLPCNK(gl)FK_
PTPRF	Ubiquitylation	K1650	-0.595	-1.027	_LLASSK(gl)AHTSR_
PTPRF	Ubiquitylation	K1665	-0.790		_FISANLPCNK(gl)FK_
PTPRG	Ubiquitylation	K899	1.705		_LRPLPGK(gl)DSK_
PTPRG	Ubiquitylation	K1155	0.544		_QFK(gl)LVTQCNAK_
PTPRG	Phosphorylation	S1182	0.408	0.434	_NRNS(ph)SVVPSER_
PTPRS	Ubiquitylation	K1650	-0.595	-1.027	_LLASSK(gl)AHTSR_
PTPRS	Ubiquitylation	K1665	-0.790		_FISANLPCNK(gl)FK_
PTPRU	Phosphorylation	S853	-0.196	-0.039	_SGGVTEASSLLGGS(ph)PR_
ROBO1	Phosphorylation	S944	-0.471	-0.191	_KVPS(ph)FTFTPTVTYQR_
ROBO1	Phosphorylation	T946	0.115	0.428	_KVPSFT(ph)FTPTVTYQR_
ROBO1	Phosphorylation	T948		0.436	_KVPSFTFT(ph)PTVTYQR_
ROBO1	Phosphorylation	T1244		-0.163	_MYLQQDELEEEEDERGPT(ph)PPVR_
SUSD1	Ubiquitylation	K284		-0.698	_ITSVCTEK(gl)GTWR_
TNXB	Phosphorylation	S2218	0.168	0.267	_GEES(ph)EVTVGGLEPGR_
TRIM9	Phosphorylation	T41	2.861	2.803	_NILVQT(ph)PESESPQSHR_
TRIM9	Phosphorylation	S46	-0.090	0.152	_NILVQTPESES(ph)PQSHR_
TRIM9	Phosphorylation	S49	-0.049		_NILVQTPESESPQS(ph)HR_
TRIM9	Ubiquitylation	K359		1.745	_DQISHCTVK(gl)LR_
TTN	Ubiquitylation	K27327	-0.283	0.183	_AGEVLK(gl)INADIAGR_
TYRO3	Phosphorylation	S930	0.766	-0.051	_YILTPGGLAEQPGQAEHQPES(ph)PLNETQR_
VWA1	Ubiquitylation	K418		-2.830	_ESALSAK(gl)ACTPDGPRPR_