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Query: TNXB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TNXB 1 4.015 -1.880 3.580

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TNXB Phosphorylation S2218 0.168 0.267 _GEES(ph)EVTVGGLEPGR_

Background Information for TNXB:


Pubmed-TNXB »
Uniprot-TNXB »
Biogrid-TNXB »
ProteomicsDB-TNXB »

Tumorportal-TNXB »
COSMIC-TNXB »
GenomeRNAi-TNXB »
Genecards-TNXB


Protein-protein Interactions for TNXB
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TNXB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TNXB
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members EG-like_dom IPR000742 1.74
Category members EGF_extracell IPR013111 0.46
Category members Fibronectin_type3 IPR003961 0.19
Category members Fibrinogen_a/b/g_C_dom IPR002181 0


Protein complexes (CORUM database) featuring TNXB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TNXB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members Pathway Pathway_595 KEGG_FOCAL_ADHESION 0 1.08
Category members GO Category GO:0030036 actin cytoskeleton organization Database 1.08
Category members GO Category GO:0005578 proteinaceous extracellular matrix Database 0.53
Category members GO Category GO:0031012 extracellular matrix Database 0.45
Category members GO Category GO:0043506 regulation of JUN kinase activity Database 0.35
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008201 heparin binding Database 0.27
Category members GO Category GO:0030198 extracellular matrix organization Database 0.26
Category members GO Category GO:0005178 integrin binding Database 0.09
Category members GO Category GO:0005518 collagen binding Database 0.02
Category members GO Category GO:0030199 collagen fibril organization Database 0.01
Category members Pathway Pathway_922 KEGG_ECM_RECEPTOR_INTERACTION 0 0
Category members Disease phenotype EHLERS-DANLOS_SYNDROME_TYPE_III EHLERS-DANLOS SYNDROME TYPE III Database 0
Category members GO Category GO:0005583 fibrillar collagen Database 0
Category members GO Category GO:0006629 lipid metabolic process Database 0
Category members GO Category GO:0006631 fatty acid metabolic process Database 0
Category members GO Category GO:0006641 triglyceride metabolic process Database 0
Category members GO Category GO:0007155 cell adhesion Database 0
Category members GO Category GO:0007160 cell-matrix adhesion Database 0
Category members GO Category GO:0016337 cell-cell adhesion Database 0
Category members GO Category GO:0032963 collagen metabolic process Database 0
Category members GO Category GO:0043206 extracellular fibril organization Database 0
Category members GO Category GO:0048251 elastic fiber assembly Database 0


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