RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PAFAH1B1	1	0.820	-0.330				1.632	0.711
RPL22	1	1.130	-0.020	1.787	0.441	0.116	-0.324	-0.312
AAMP	1	-0.630	1.750	1.841
TNXB	1	-1.880	3.580
ZNF207	0				0.201	0.775	-1.075	-0.053
FGFR1	0	0.210	0.150
APLP2	0	-0.080	0.400
APOB	0	0.130	0.050				-4.359	0.702
NRP1	0	0.880	-0.670				0.909	0.353
BMP7	0
PCSK6	0	0.020	-0.380
APP	0	0.100	-0.260					0.285
PTPRF	0	1.070	-0.360				-0.194	0.365
HDGF	0	-0.810	0.160
HDGF	0	-0.810	0.160
SLIT2	0	-0.940	1.740				-3.112	-1.071
HSD17B12	0	0.180	-0.130		1.013	-0.647
HSD17B12	0	0.180	-0.130				0.799	0.606
ADAMTS1	0	-0.440	0.580					-0.624
RPL29	0	0.420	-0.710	-1.607	-1.336	-0.357	-1.747	-0.976
LRPAP1	0	-0.570	0.800
LRPAP1	0	-0.570	0.800				-0.311	-0.181
ZNF146	0	-0.780	1.440				1.083	-0.045
ZNF146	0	-0.780	1.440			-0.217
PTCH1	0	0.630	-0.690

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AAMP	Ubiquitylation	K229	-0.959	0.092	_VLPDGK(gl)R_
APLP2	Ubiquitylation	K744	-1.204		_HLNK(gl)M(ox)QNHGYENPTYK_
APP	Ubiquitylation	K751	-1.778	-1.280	_HLSK(gl)M(ox)QQNGYENPTYK_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
FGFR1	Ubiquitylation	K510	1.047	-0.221	_VTK(gl)VAVK_
HDGF	Ubiquitylation	K11	0.744		_EYK(gl)CGDLVFAK_
HDGF	Ubiquitylation	K39	0.518		_IDEMPEAAVK(gl)STANK_
HDGF	Phosphorylation	S148	0.175	0.116	_KGNAEGS(ph)SDEEGKLVIDEPAK_
HDGF	Phosphorylation	S149	0.156	-0.009	_GNAEGSS(ph)DEEGKLVIDEPAKEK_
HDGF	Phosphorylation	S181	0.232	0.201	_RAGDLLEDS(ph)PK_
HSD17B12	Ubiquitylation	K84	-0.151		_SK(gl)DKLDQVSSEIKEK_
HSD17B12	Ubiquitylation	K261	-0.499	-0.079	_SAIK(gl)TVGLQSR_
LRPAP1	Ubiquitylation	K65		-0.500	_LNQLWEK(gl)AQR_
LRPAP1	Ubiquitylation	K94	-0.080		_IQERDELAWK(gl)K_
PAFAH1B1	Ubiquitylation	K76	-0.530		_LNEAK(gl)EEFTSGGPLGQK_
PCSK6	Ubiquitylation	K573		-0.143	_SQLLAK(gl)R_
PTCH1	Ubiquitylation	K904		-0.390	_DKPIDISQLTK(gl)QR_
PTPRF	Ubiquitylation	K1650	-0.595	-1.027	_LLASSK(gl)AHTSR_
PTPRF	Ubiquitylation	K1665	-0.790		_FISANLPCNK(gl)FK_
RPL22	Ubiquitylation	K52	1.062		_VNGK(gl)AGNLGGGVVTIER_
RPL22	Ubiquitylation	K69	0.510		_SK(gl)ITVTSEVPFSK_
RPL22	Ubiquitylation	K84	0.972	1.312	_YLK(gl)YLTK_
RPL22	Ubiquitylation	K107	0.972	0.780	_VVANSK(gl)ESYELR_
RPL29	Ubiquitylation	K33	0.714	0.542	_YESLK(gl)GVDPK_
RPL29	Ubiquitylation	K38	-0.152	0.671	_GVDPK(gl)FLR_
RPL29	Ubiquitylation	K63	0.401	1.004	_MQANNAK(gl)AMSAR_
RPL29	Ubiquitylation	K73	0.803	0.511	_AEAIK(gl)ALVKPK_
RPL29	Ubiquitylation	K106	1.314		_LAYIAHPKLGK(gl)_
RPL29	Ubiquitylation	K136	-1.449		_DQTK(gl)AQAAAPASVPAQAPK_
SLIT2	Ubiquitylation	K72		-1.544	_ITK(gl)TDFAGLR_
SLIT2	Ubiquitylation	K103		0.625	_GAFQDLK(gl)ELER_
SLIT2	Ubiquitylation	K825		0.073	_TFDGLK(gl)SLR_
TNXB	Phosphorylation	S2218	0.168	0.267	_GEES(ph)EVTVGGLEPGR_
ZNF146	Ubiquitylation	K112	0.072		_AFIQK(gl)SNLIR_
ZNF207	Ubiquitylation	K27	0.828		_DFDDEK(gl)ILIQHQK_
ZNF207	Ubiquitylation	K103	0.783	1.075	_LLEQK(gl)TQESQK_