RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
VCAN	1	0.760	-0.630
VCAN	1	0.760	-0.630
LAMB1	1	-0.210	0.090				-0.236	-0.180
TFIP11	1	0.430	-0.170		-0.345	0.264	0.180	-0.057
TFIP11	1	0.430	-0.170
P3H1	1	-2.060	3.660			-0.329	0.349	0.449
CHL1	1
FBN2	1	1.100	-0.880
TNXB	1	-1.880	3.580
COCH	0	0.370	-0.760
TIMP1	0	0.660	-0.830
TGFB1	0	-0.550	1.050
LGALS3BP	0	-0.030	0.900	-0.332	-1.200	-0.548
WNT5A	0
HPCAL1	0	-0.410	-0.260
LOXL1	0	-0.150	-0.060
LAMA5	0	-1.280	1.860	1.257			0.402	0.337
LGALS3	0	0.430	-0.510		-0.143	-1.425
LAMC1	0	0.650	-1.240				-0.164	0.459
HAPLN3	0	-1.310	1.580
GFOD2	0	-0.790	0.530
COL6A2	0	-0.530	0.950
CPA6	0	-0.350	0.140
CRTAP	0	0.070	-0.010				0.714	0.459
CALR	0	-1.300	2.220				0.480	0.054
EMID1	0	-0.480	1.190
HAPLN4	0	1.890	-0.870

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CALR	Ubiquitylation	K48		0.703	_SDFGK(gl)FVLSSGK_
CALR	Ubiquitylation	K153	-0.924	0.619	_GK(gl)NVLINK_
CALR	Ubiquitylation	K159	-1.004	0.381	_NVLINK(gl)DIR_
CHL1	Phosphorylation	T91	4.193		_IIPSNNS(ph)GTFR_
COCH	Ubiquitylation	K344		0.392	_YVK(gl)PLVQK_
COL6A2	Ubiquitylation	K120		0.009	_ASFIK(gl)NLQGISSFR_
COL6A2	Ubiquitylation	K197		-0.738	_LFAVAPNQNLK(gl)EQGLR_
COL6A2	Ubiquitylation	K851		-0.451	_LGEQNFHK(gl)AR_
CPA6	Phosphorylation	S60	0.448	0.799	_KIS(ph)YQLK_
EMID1	Ubiquitylation	K150	0.142		_LK(gl)VLEAK_
FBN2	Ubiquitylation	K385		1.550	_MTK(gl)MQCCCEPGR_
FBN2	Ubiquitylation	K712	0.133	1.523	_STCYGGIKK(gl)_
FBN2	Ubiquitylation	K1582		0.690	_VGNCYLK(gl)FGPR_
GFOD2	Ubiquitylation	K271		-1.381	_GADLYGQK(gl)NSATQEELLLR_
HAPLN3	Phosphorylation	S192	-0.457	-0.815	_QDKEHDVS(ph)LEIQDLR_
HAPLN4	Phosphorylation	S111	0.211	0.521	_AFGS(ph)YRGR_
HPCAL1	Ubiquitylation	K174	-1.077		_GAK(gl)SDPSIVR_
LAMA5	Ubiquitylation	K255		1.313	_EFTK(gl)ATNVR_
LAMB1	Ubiquitylation	K182		2.294	_SSDFGK(gl)TWGVYR_
LAMB1	Ubiquitylation	K207		1.047	_YFAYDCEASFPGISTGPMK(gl)K_
LAMB1	Ubiquitylation	K208		1.047	_YFAYDCEASFPGISTGPMK(gl)K_
LAMB1	Ubiquitylation	K239		-0.148	_ALDPAFK(gl)IEDPYSPR_
LAMB1	Ubiquitylation	K253		0.823	_IQNLLK(gl)ITNLR_
LAMB1	Ubiquitylation	K772		2.879	_SVVK(gl)TPMTDVCR_
LAMC1	Ubiquitylation	K564		0.404	_YFIAPAK(gl)FLGK_
LGALS3BP	Ubiquitylation	K110		0.766	_SLGWLK(gl)SNCR_
LGALS3BP	Ubiquitylation	K395		-0.312	_YK(gl)GLNLTEDTYKPR_
LOXL1	Ubiquitylation	K493		0.657	_ASFCLEDSTCDFGNLK(gl)R_
TFIP11	Phosphorylation	S2	-0.156	1.652	_(ac)S(ph)LSHLYR_
TFIP11	Phosphorylation	T50	0.516	0.623	_EEAT(ph)YGVWAERDSDDERPSFGGK_
TFIP11	Phosphorylation	S59		0.981	_EEATYGVWAERDS(ph)DDERPSFGGK_
TFIP11	Phosphorylation	S98	0.025	0.231	_KGAAEEAELEDS(ph)DDEEKPVK_
TFIP11	Phosphorylation	S210	0.293	0.075	_TTQSMQDFPVVDS(ph)EEEAEEEFQK_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TIMP1	Ubiquitylation	K70	1.253	-0.548	_MYK(gl)GFQALGDAADIR_
TNXB	Phosphorylation	S2218	0.168	0.267	_GEES(ph)EVTVGGLEPGR_
VCAN	Ubiquitylation	K98		2.161	_IGQDYK(gl)GR_
VCAN	Ubiquitylation	K347		3.178	_FDAYCFK(gl)R_
VCAN	Phosphorylation	S2130	0.600	0.798	_QEIESETTS(ph)EEQIQEEK_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_