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Query: LRFN1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LRFN1 0 1.033 1.060 -0.960

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LRFN1 Phosphorylation S646 0.392 0.474 _SLGGS(ph)ATSLCLLPSEETSGEESR_
LRFN1 Phosphorylation S731 -0.080 0.162 _S(ph)TPHLDGAGGGAAGEDGDLGLGSAR_
LRFN1 Phosphorylation T732 -0.080 0.162 _S(ph)TPHLDGAGGGAAGEDGDLGLGSAR_
LRFN1 Phosphorylation S642 -0.199 _S(ph)LGGSATSLCLLPSEETSGEESR_
LRFN1 Phosphorylation S674 -0.799 -1.058 _S(ph)GALEPPTSAPPTLALVPGGAAAR_
LRFN1 Phosphorylation S632 0.559 _AM(ox)EAETAS(ph)AEPEVVLGR_

Background Information for LRFN1:


Pubmed-LRFN1 »
Uniprot-LRFN1 »
Biogrid-LRFN1 »
ProteomicsDB-LRFN1 »

Tumorportal-LRFN1 »
COSMIC-LRFN1 »
GenomeRNAi-LRFN1 »
Genecards-LRFN1


Protein-protein Interactions for LRFN1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CCL14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDCP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDH5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IFNA21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL13RA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRFN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRMT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCN3B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPACA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM30B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMX1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LRFN1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ig-like_dom IPR007110 0.6
Category members Leu-rich_rpt_typical-subtyp IPR003591 0.57
Category members Ig_sub IPR003599 0.43
Category members Immunoglobulin IPR013151 0.23
Category members Cys-rich_flank_reg_C IPR000483 0.21
Category members Ig_sub2 IPR003598 0.21
Category members Fibronectin_type3 IPR003961 0.19
Category members Ig_I-set IPR013098 0.13


Protein complexes (CORUM database) featuring LRFN1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LRFN1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0045211 postsynaptic membrane Database 0.06
Category members GO Category GO:0014069 postsynaptic density Database 0
Category members GO Category GO:0030054 cell junction Database 0


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