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Query: TRIM9

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRIM9 3 8.359 -0.990 0.950

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRIM9 Phosphorylation T41 2.861 2.803 _NILVQT(ph)PESESPQSHR_
TRIM9 Ubiquitylation K359 1.745 _DQISHCTVK(gl)LR_
TRIM9 Phosphorylation S46 -0.090 0.152 _NILVQTPESES(ph)PQSHR_
TRIM9 Phosphorylation S49 -0.049 _NILVQTPESESPQS(ph)HR_

Background Information for TRIM9:


Pubmed-TRIM9 »
Uniprot-TRIM9 »
Biogrid-TRIM9 »
ProteomicsDB-TRIM9 »

Tumorportal-TRIM9 »
COSMIC-TRIM9 »
GenomeRNAi-TRIM9 »
Genecards-TRIM9


Protein-protein Interactions for TRIM9
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BTRC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FBXW11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KLHL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RELL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SGPL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPATA24 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait STX19 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRIM9
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_FYVE_PHD IPR011011 1.23
Category members Fibronectin_type3 IPR003961 0.19
Category members Bbox_C IPR003649 0.18
Category members Znf_B-box IPR000315 0
Category members Znf_RING IPR001841 0
Category members B30.2/SPRY IPR001870 0
Category members SPRY_dom IPR003877 0
Category members ConA-like_lec_gl_sf IPR008985 0
Category members Znf_C3HC4_RING-type IPR018957 0


Protein complexes (CORUM database) featuring TRIM9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRIM9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_621 REACTOME_ADAPTIVE_IMMUNE_SYSTEM 0 4.72
Category members Pathway Pathway_458 REACTOME_IMMUNE_SYSTEM 0 3
Category members Pathway Pathway_764 REACTOME_CLASS_I_MHC_MEDIATED_ANTIGEN_PROCESSING_PRESENTATION 0 2.56
Category members Pathway Pathway_832 REACTOME_ANTIGEN_PROCESSING_UBIQUITINATION_PROTEASOME_DEGRADATION 0 1.58
Category members GO Category GO:0005856 cytoskeleton Database 0.63
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0008021 synaptic vesicle Database 0.28
Category members GO Category GO:0030425 dendrite Database 0.26
Category members GO Category GO:0004842 ubiquitin-protein ligase activity Database 0.24
Category members GO Category GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process Database 0.23
Category members GO Category GO:0000149 SNARE binding Database 0.05
Category members GO Category GO:0016079 synaptic vesicle exocytosis Database 0
Category members GO Category GO:0030054 cell junction Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0045955 negative regulation of calcium ion-dependent exocytosis Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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