RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
W

Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CEP55	2	2.010	-0.830				-1.229	-0.412
PPP1CC	2	0.390	-0.090
PPP1CC	2	0.390	-0.090	0.568	0.526	0.917	-0.533	0.173
NDE1	1
MYH9	1	-1.530	2.620	0.366	-0.040	-0.375	0.136	-0.183
FSD1	1	0.210	-0.200					1.661
STAMBP	1	-1.500	2.650
RDX	1	0.060	-0.140	-0.243			-0.126	0.558
RDX	1	0.060	-0.140		2.501	-2.209	0.246	0.091
TPM3	1	2.410	-1.030	-0.178	0.366	-0.380	0.330	-1.062
TPM3	1	2.410	-1.030				-1.315
SPIRE2	1	-1.600	2.860	1.007
RALA	0	-0.480	0.600				0.727	0.398
PKN2	0	0.530	-0.200	-0.561			-0.138	0.314
MYLK	0	-0.520	0.000	0.754
RHOA	0	-0.510	1.370	-0.485			0.532	0.279
RAB21	0	0.800	0.060	0.539			0.340	0.241
SSH1	0	-0.780	1.560
RAB11A	0	1.130	-0.130	0.324			0.697	0.458
RAB11A	0	1.130	-0.130
ECT2	0	0.620	-0.960					-0.787
MASTL	0	0.400	-0.110		-0.766	0.090
SEPT7	0
PKN1	0	-1.000	1.540				-0.016
SEPT6	0	-0.330	0.650
MYH10	0	0.740	-0.560	0.036			0.397	0.165
MYH10	0	0.740	-0.560		-0.265	-0.438
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
SPIRE1	0	-1.220	1.900
DCTN3	0	1.270	-1.030	0.493
RHOB	0	0.130	-0.210
ITGB1	0	0.390	-0.650				0.101	-0.036
RHOC	0	-0.810	0.570
RHOC	0	-0.810	0.570	-0.485			0.532	0.279
PLCD3	0	0.810	-0.250
RACGAP1	0	0.180	0.230				-0.308	-0.006
RACGAP1	0	1.070	-0.710				-0.308	-0.006
SEPT2	0	-0.720	1.100				0.500	-0.778
NF2	0	-1.080	1.470				0.218	-0.073
NF2	0	-1.080	1.470
PDXP	0	0.680	-0.250	-2.986

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
CEP55	Ubiquitylation	K22	-0.367		_WGSKPSNSK(gl)SETTLEK_
CEP55	Ubiquitylation	K31	0.449		_LK(gl)GEIAHLK_
CEP55	Ubiquitylation	K48	0.226	0.279	_TSVDEITSGK(gl)GK_
CEP55	Ubiquitylation	K50	0.539	0.140	_TSVDEITSGKGK(gl)_
CEP55	Ubiquitylation	K92	0.512		_LRDQLK(gl)AR_
CEP55	Ubiquitylation	K145	0.288	0.387	_IAELESK(gl)TNTLR_
CEP55	Ubiquitylation	K180	-0.597		_DALEK(gl)NQQWLVYDQQR_
CEP55	Ubiquitylation	K207	0.577		_IFELEK(gl)K_
CEP55	Ubiquitylation	K208	0.577		_IFELEK(gl)K_
CEP55	Ubiquitylation	K233	0.011	-0.975	_KPESEGYLQEEK(gl)QK_
CEP55	Ubiquitylation	K235	-0.505	-0.975	_KPESEGYLQEEK(gl)QK_
CEP55	Ubiquitylation	K245	-0.005		_CYNDLLASAK(gl)K_
CEP55	Ubiquitylation	K246	1.149		_K(gl)DLEVER_
CEP55	Phosphorylation	S428	0.976	0.483	_S(ph)PTAALNESLVECPK_
CEP55	Phosphorylation	T430	1.582	0.356	_SPT(ph)AALNESLVECPK_
DCTN3	Ubiquitylation	K50	-0.163	0.482	_VQVALGNISSK(gl)R_
ITGB1	Ubiquitylation	K774	0.402		_MNAK(gl)WDTGENPIYK_
ITGB1	Ubiquitylation	K784	-0.172	0.350	_WDTGENPIYK(gl)SAVTTVVNPK_
ITGB1	Ubiquitylation	K794	0.755	0.604	_SAVTTVVNPK(gl)YEGK_
MASTL	Ubiquitylation	K266		-0.911	_DTTPYSSK(gl)LLK_
MASTL	Ubiquitylation	K350		-0.870	_LCAK(gl)SANAIETK_
MASTL	Phosphorylation	S370	0.034	0.079	_KDLELALS(ph)PIHNSSALPTTGR_
MASTL	Phosphorylation	S453	-0.863	-0.537	_NFELVDSS(ph)PCKK_
MASTL	Ubiquitylation	K456		-0.960	_NFELVDSSPCK(gl)K_
MASTL	Ubiquitylation	K457		-0.960	_NFELVDSSPCK(gl)K_
MASTL	Phosphorylation	T611	0.195		_ESSFEESNIEDPLIVT(ph)PDCQEKTSPK_
MASTL	Phosphorylation	T618		-0.221	_ESSFEESNIEDPLIVTPDCQEKT(ph)SPK_
MASTL	Phosphorylation	S619		-0.221	_ESSFEESNIEDPLIVTPDCQEKT(ph)SPK_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
MYH10	Phosphorylation	S225		-0.296	_DHNIPQES(ph)PKPVK_
MYH10	Ubiquitylation	K256	0.402		_QLLQANPILESFGNAKTVK(gl)_
MYH10	Ubiquitylation	K899	-1.210		_QEEELQAK(gl)DEELLK_
MYH10	Phosphorylation	S1979	-0.233	-0.052	_GGPISFS(ph)SSR_
MYH10	Phosphorylation	S1980	-0.231		_GGPISFSS(ph)SR_
MYH10	Phosphorylation	S1981	-0.541	-0.089	_GGPISFSSS(ph)R_
MYH10	Phosphorylation	S1998	0.372	0.302	_QLHLEGASLELS(ph)DDDTESK_
MYH9	Ubiquitylation	K66	0.545		_VK(gl)VNKDDIQK_
MYH9	Ubiquitylation	K403	0.390	0.869	_DYVQK(gl)AQTK_
MYH9	Ubiquitylation	K682	-0.508		_AGK(gl)LDPHLVLDQLR_
MYH9	Ubiquitylation	K760	0.409	0.964	_IGQSK(gl)VFFR_
MYH9	Ubiquitylation	K821	-0.339		_NCAAYLK(gl)LR_
MYH9	Ubiquitylation	K856	-1.336		_EEELVK(gl)VR_
MYH9	Ubiquitylation	K860	-0.570	0.212	_VREK(gl)QLAAENR_
MYH9	Ubiquitylation	K1274	0.036		_VRTELADK(gl)VTK_
MYH9	Ubiquitylation	K1277	0.081		_TELADKVTK(gl)_
MYH9	Ubiquitylation	K1413	0.288		_VAAYDKLEK(gl)TK_
MYH9	Ubiquitylation	K1415		0.790	_VAAYDKLEKTK(gl)_
MYH9	Phosphorylation	S1943	0.168	0.290	_KGAGDGS(ph)DEEVDGKADGAEAK_
NDE1	Ubiquitylation	K270	2.830		_VGALESK(gl)LASCR_
NDE1	Phosphorylation	S282	-0.767	-0.382	_NLVYDQS(ph)PNR_
NDE1	Phosphorylation	S306		-2.156	_RPS(ph)STSVPLGDK_
NF2	Phosphorylation	S13	0.833	0.924	_MSFSS(ph)LKR_
NF2	Phosphorylation	S493	1.436	1.115	_RLS(ph)MEIEK_
NF2	Ubiquitylation	K586	0.399	-0.041	_LTLQSAK(gl)SR_
PKN1	Phosphorylation	S561	-0.165	0.098	_LNLGTDSDS(ph)SPQK_
PKN1	Phosphorylation	S562	0.231	1.001	_LNLGTDSDSS(ph)PQK_
PKN1	Phosphorylation	T914	-0.855		_TDVSNFDEEFTGEAPT(ph)LSPPRDAR_
PKN1	Phosphorylation	S916	-0.482	-0.510	_TDVSNFDEEFTGEAPTLS(ph)PPR_
PKN2	Phosphorylation	S110	-0.178	0.111	_LQELNAHIVVS(ph)DPEDITDCPR_
PKN2	Phosphorylation	S360	-0.306	-0.065	_ATSVALPGWS(ph)PSETR_
PKN2	Ubiquitylation	K385	0.967		_NLLK(gl)TDDLSNDVCAVLK_
PKN2	Ubiquitylation	K447		0.735	_SLCAVK(gl)FLR_
PKN2	Ubiquitylation	K502	1.448		_QQGK(gl)TFLR_
PKN2	Phosphorylation	T527	-1.598	-1.740	_AIPT(ph)VNHSGTFSPQAPVPTTVPVVDVR_
PKN2	Phosphorylation	S535		-1.794	_AIPTVNHSGTFS(ph)PQAPVPTTVPVVDVR_
PKN2	Phosphorylation	S582	0.725	0.956	_AS(ph)SLGEIDESSELR_
PKN2	Phosphorylation	S583	0.827	1.023	_ASS(ph)LGEIDESSELR_
PKN2	Ubiquitylation	K930	-0.445		_VK(gl)PPFIPTIR_
PKN2	Phosphorylation	T958	-1.135	-0.827	_GREDVSNFDDEFTSEAPILT(ph)PPREPR_
PLCD3	Ubiquitylation	K205	0.167	-0.183	_MSFK(gl)EIK_
PLCD3	Phosphorylation	S496	0.167	0.537	_ALS(ph)DREEEEEDDEEEEEEVEAAAQR_
PPP1CC	Ubiquitylation	K35	-0.280	-0.504	_GSKPGK(gl)NVQLQENEIR_
PPP1CC	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CC	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CC	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CC	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CC	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Phosphorylation	T320		-0.561	_KPNATRPVT(ph)PPR_
PPP1CC	Ubiquitylation	K328	0.848	0.425	_GMITK(gl)QAK_
RAB11A	Ubiquitylation	K69	-0.533	0.554	_VVLIGDSGVGK(gl)SNLLSR_
RAB11A	Ubiquitylation	K103	-0.360	-0.185	_SIQVDGK(gl)TIK_
RAB11A	Ubiquitylation	K106		0.335	_SIQVDGKTIK(gl)_
RAB11A	Ubiquitylation	K224	-0.187	0.901	_IVSQK(gl)QMSDRR_
RAB21	Ubiquitylation	K138	0.255	-0.579	_IDLEK(gl)ER_
RACGAP1	Ubiquitylation	K53	0.960		_TDHELGK(gl)YK_
RACGAP1	Ubiquitylation	K60	1.380		_DLLMK(gl)AETER_
RACGAP1	Ubiquitylation	K71	0.352	0.233	_SALDVK(gl)LK_
RACGAP1	Ubiquitylation	K84	0.484	0.846	_NQVDVEIK(gl)RR_
RACGAP1	Ubiquitylation	K95	-0.492		_AEADCEK(gl)LER_
RACGAP1	Ubiquitylation	K199	-2.285	-0.347	_QFVDGPPGPVK(gl)K_
RACGAP1	Ubiquitylation	K200	-0.365	-0.347	_QFVDGPPGPVKK(gl)_
RACGAP1	Phosphorylation	S203	1.255	0.831	_S(ph)IGSAVDQGNESIVAK_
RACGAP1	Ubiquitylation	K292	-0.427		_LHDFVSK(gl)TVIKPESCVPCGK_
RACGAP1	Ubiquitylation	K305	-0.770		_TVIKPESCVPCGK(gl)R_
RACGAP1	Phosphorylation	T342	-1.072	-0.919	_DRCPLPCIPTLIGT(ph)PVK_
RACGAP1	Ubiquitylation	K404	-0.200		_VK(gl)TVPLLSK_
RACGAP1	Ubiquitylation	K490	0.528		_VAQSPHTK(gl)MDVANLAK_
RACGAP1	Phosphorylation	T580	-0.839		_VSLLGPVTT(ph)PEHQLLK_
RACGAP1	Ubiquitylation	K587	-0.985		_VSLLGPVTTPEHQLLK(gl)TPSSSSLSQR_
RACGAP1	Phosphorylation	S590	-0.415	-0.021	_TPS(ph)SSSLSQR_
RACGAP1	Phosphorylation	S591		-0.217	_TPSS(ph)SSLSQR_
RACGAP1	Ubiquitylation	K604	0.953		_STLTK(gl)NTPR_
RALA	Ubiquitylation	K7	0.700		_(ac)AANKPK(gl)GQNSLALHK_
RALA	Ubiquitylation	K134	0.656	-0.585	_SDLEDK(gl)RQVSVEEAK_
RALA	Ubiquitylation	K143		-0.388	_QVSVEEAK(gl)NR_
RDX	Ubiquitylation	K3	-0.313	-0.251	_PK(gl)PINVR_
RDX	Ubiquitylation	K79	0.172	-0.032	_ENPLQFK(gl)FR_
RDX	Ubiquitylation	K139	1.519	0.361	_FGDYNK(gl)EVHK_
RDX	Ubiquitylation	K162	1.465	0.362	_VLEQHK(gl)LTK_
RDX	Ubiquitylation	K162	1.580	0.660	_VMDQHK(gl)LTR_
RDX	Ubiquitylation	K165	1.017		_LTK(gl)EQWEER_
RDX	Ubiquitylation	K211	1.467		_IAQDLEMYGVNYFEIKNK(gl)_
RDX	Ubiquitylation	K253	-0.069		_NISFNDK(gl)K_
RDX	Ubiquitylation	K263	-0.786		_K(gl)APDFVFYAPR_
RDX	Ubiquitylation	K344	0.598	0.235	_EK(gl)EELMLR_
RDX	Ubiquitylation	K352	0.222		_LK(gl)QIEEQTIK_
RDX	Ubiquitylation	K357	-0.003		_LQDYEEK(gl)TK_
RDX	Ubiquitylation	K359	0.051		_LQDYEEK(gl)TK_
RDX	Ubiquitylation	K400	-0.067		_AAEEAK(gl)SAIAK_
RDX	Ubiquitylation	K405	1.145		_SAIAK(gl)QAADQMK_
RDX	Ubiquitylation	K435	0.279		_IALLEEAK(gl)K_
RDX	Ubiquitylation	K436	0.279		_IALLEEAK(gl)K_
RDX	Ubiquitylation	K450	0.393	0.174	_AK(gl)EAQDDLVK_
RDX	Ubiquitylation	K526	0.583		_K(gl)QLQALSSELAQAR_
RHOA	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOA	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOA	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOA	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_
RHOB	Ubiquitylation	K135	0.050	-0.281	_MK(gl)QEPVRTDDGR_
RHOC	Ubiquitylation	K6	0.708		_K(gl)KLVIVGDGACGK_
RHOC	Ubiquitylation	K7	0.708		_K(gl)KLVIVGDGACGK_
RHOC	Ubiquitylation	K118	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOC	Ubiquitylation	K119	-0.408		_HFCPNVPIILVGNK(gl)K_
RHOC	Ubiquitylation	K135	-0.528	-0.796	_MK(gl)QEPVKPEEGRDMANR_
RHOC	Ubiquitylation	K162	0.345	0.453	_IGAFGYMECSAK(gl)TK_
RHOC	Ubiquitylation	K172	0.050	-0.660	_MK(gl)QEPVRSEEGR_
SEPT2	Ubiquitylation	K74	-2.504	-0.241	_VIPGAAEK(gl)IER_
SEPT2	Ubiquitylation	K190	-0.563	-0.040	_ADTLTLK(gl)ER_
SEPT2	Phosphorylation	S218	0.274	0.283	_IYHLPDAES(ph)DEDEDFKEQTR_
SEPT2	Ubiquitylation	K249	-0.586	0.854	_ASIPFSVVGSNQLIEAK(gl)GK_
SEPT2	Ubiquitylation	K251		0.572	_ASIPFSVVGSNQLIEAKGK(gl)_
SEPT2	Ubiquitylation	K310	-1.570		_K(gl)VENEDMNK(gl)DQILLEK_
SEPT2	Ubiquitylation	K318	-1.909		_K(gl)VENEDMNK(gl)DQILLEK_
SEPT6	Ubiquitylation	K172		-0.228	_SLDLVTMKK(gl)_
SEPT6	Ubiquitylation	K191		-0.227	_ADAISK(gl)SELTK_
SEPT6	Ubiquitylation	K196	-1.431	0.171	_SELTK(gl)FK_
SEPT6	Ubiquitylation	K337		0.431	_RNEFLGELQK(gl)_
SEPT6	Ubiquitylation	K426	0.968		_K(gl)NNPWLCTE_
SEPT7	Ubiquitylation	K88	0.195		_IK(gl)KTVQVEQSK_
SEPT7	Ubiquitylation	K209	0.315	0.490	_ADTLTPEECQQFKK(gl)_
SEPT7	Ubiquitylation	K213	1.008	1.111	_QIMK(gl)EIQEHK_
SEPT7	Ubiquitylation	K219	0.414	0.573	_EIQEHK(gl)IK_
SEPT7	Ubiquitylation	K333		0.134	_GQLTK(gl)SPLAQMEEERR_
SEPT7	Phosphorylation	S334	0.362	0.417	_S(ph)PLAQMEEERR_
SEPT7	Ubiquitylation	K395	0.680		_NLEAQHK(gl)ELEEK_
SEPT7	Phosphorylation	T426		0.290	_ILEQQNSSRT(ph)LEK_
SPIRE1	Phosphorylation	S387	-0.796	-0.231	_LRPVS(ph)PEEIRR_
SPIRE1	Phosphorylation	T509	-1.273		_FLPISST(ph)PQPER_
SPIRE1	Phosphorylation	S678	0.422	0.590	_SKS(ph)M(ox)DKSDEELQFPK_
SSH1	Phosphorylation	S937	0.799	0.728	_SSS(ph)SDSIHSVR_
STAMBP	Ubiquitylation	K96	-0.832		_LK(gl)EIAFPK_
STAMBP	Ubiquitylation	K107	0.530	-0.048	_AEELK(gl)AELLK_
STAMBP	Ubiquitylation	K144	-0.041		_NMAIQQELEK(gl)EK_
STAMBP	Ubiquitylation	K146	-0.693		_NMAIQQELEKEK(gl)QR_
STAMBP	Ubiquitylation	K180		0.159	_LK(gl)IVQEFGK_
TPM3	Ubiquitylation	K11	0.368	1.125	_(ac)AGITTIEAVK(gl)R_
TPM3	Ubiquitylation	K116	-0.031		_MELQEIQLKEAK(gl)_
TPM3	Ubiquitylation	K223	0.612		_TIDDLEDK(gl)LK_
TPM3	Ubiquitylation	K225	0.564		_TIDDLEDKLK(gl)CTK_
TPM3	Ubiquitylation	K228	1.242	0.668	_CTK(gl)EEHLCTQR_