RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
ADCY3	1	-0.850	1.180
CREB3L2	1	-2.290	4.300
DYNC1H1	1	-0.620	0.440	0.066			0.428	0.323
PRKACA	0	0.380	-0.680		-1.005	-0.697	0.234	0.487
NSF	0	-0.060	-0.040	0.076		-1.033	0.396	0.346
DYNC1I2	0	0.730	-0.890
DYNC1I2	0	0.730	-0.890	-0.096			0.035	-0.269
DYNC1I2	0	0.730	-0.890
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750
GNAS	0	0.840	-0.750	-0.166	-0.094	0.032	0.420	0.504
STX4	0	1.010	-1.210				-0.201	-0.827
RAB11A	0	1.130	-0.130	0.324			0.697	0.458
RAB11A	0	1.130	-0.130
DCTN6	0	-0.940	1.860
CREB3	0	0.180	-0.820
RAB5A	0	-0.440	0.910	0.074	0.374	-1.305
RAB5A	0	0.080	0.240	0.074	0.374	-1.305
RAB5B	0	-0.270	0.560	0.074	0.374	-1.305
RAB5C	0	-0.660	0.470	0.074	0.374	-1.305
RAB5B	0	-0.270	0.560				0.223	0.256
CREB1	0	1.080	-0.800			-1.027
DCTN4	0	0.050	-0.530	-0.372			-0.909	-0.421
DYNC1LI2	0	-0.700	1.220
DYNC2LI1	0
ARHGDIA	0	-0.150	-0.030	0.141				-2.525
PRKACB	0	1.740	-1.200		-1.064
PRKACB	0	1.740	-1.200		-1.005	-0.697	0.234	0.487
CREB3L4	0	0.100	-0.520
RAB5A	0	-0.440	0.910				0.089	-0.362
RAB5A	0	0.080	0.240				0.089	-0.362
DYNC1LI1	0	-1.030	0.970	0.718			1.054	-0.006
ADCY9	0	-0.910	0.930
ADCY6	0	-0.720	0.740
DCTN2	0	0.200	-0.010	-0.205
DCTN2	0	0.200	-0.010
RAB11B	0	-0.130	-0.140	0.324			0.697	0.458
RAB11B	0	-0.130	-0.140
DYNC2H1	0	-1.530	1.820				-0.319	0.050
DYNC2H1	0	-1.530	1.820	0.313
DCTN1	0	1.450	-0.750	0.127
DCTN1	0	1.450	-0.750		-0.378	-2.511	0.436	0.352
VAMP2	0						0.418
VAMP2	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADCY3	Ubiquitylation	K406	-0.885		_TK(gl)TGVDMR_
ADCY3	Ubiquitylation	K628		0.051	_YSVEK(gl)EK_
ADCY3	Ubiquitylation	K879	0.818	2.820	_IEVHDQK(gl)ER_
ADCY3	Ubiquitylation	K1047		-1.036	_IGMNK(gl)GGVLAGVIGAR_
ADCY6	Phosphorylation	S54	-1.434	-1.374	_DAEPPS(ph)PTPAGPPR_
ADCY6	Ubiquitylation	K80	0.473	0.937	_GK(gl)ELGLR_
ADCY6	Ubiquitylation	K568	1.007	0.799	_AMLAK(gl)LQR_
ADCY6	Phosphorylation	S576		-0.020	_ANS(ph)MEGLMPR_
ADCY9	Ubiquitylation	K35	0.400		_INPK(gl)QLSSNSHPK_
ADCY9	Ubiquitylation	K564	0.874	0.253	_LGQSVVADQLK(gl)GLK_
ADCY9	Ubiquitylation	K622	0.176	0.287	_GQGTASSGNVSDLAQTVK(gl)TFDNLK_
ADCY9	Ubiquitylation	K628	0.266		_TFDNLK(gl)TCPSCGITFAPK_
ADCY9	Ubiquitylation	K699		1.085	_LTNSQTSLCEILQEK(gl)GR_
ADCY9	Ubiquitylation	K1218	1.351	1.067	_VLSK(gl)MGYDFDYR_
ARHGDIA	Phosphorylation	S24	-1.058	-0.942	_(ac)AEQEPTAEQLAQIAAENEEDEHS(ph)VNYKPPAQK_
ARHGDIA	Ubiquitylation	K52		0.380	_YK(gl)EALLGR_
ARHGDIA	Ubiquitylation	K99	0.365		_K(gl)QSFVLK_
ARHGDIA	Ubiquitylation	K127	1.141		_EIVSGMK(gl)YIQHTYR_
ARHGDIA	Ubiquitylation	K141	0.314	0.567	_IDK(gl)TDYM(ox)VGSYGPR_
ARHGDIA	Ubiquitylation	K167	-1.199		_AEEYEFLTPVEEAPK(gl)GMLAR_
ARHGDIA	Ubiquitylation	K178		0.739	_GSYSIK(gl)SR_
CREB1	Phosphorylation	S271	-0.979	-1.450	_TAPTSTIAPGVVM(ox)ASS(ph)PALPTQPAEEAAR_
CREB1	Ubiquitylation	K333	1.343		_ALK(gl)DLYCHK_
CREB3	Ubiquitylation	K176		-0.114	_TEEQILK(gl)R_
CREB3L2	Ubiquitylation	K364		-0.016	_LQTLVMGK(gl)VSR_
CREB3L4	Ubiquitylation	K51		0.433	_LQEQGLQGWK(gl)SGGDR_
CREB3L4	Ubiquitylation	K261		0.658	_VAACSAQNQELQK(gl)K_
DCTN1	Ubiquitylation	K618	0.526	0.373	_LICK(gl)AELIR_
DCTN2	Ubiquitylation	K70	0.861	0.880	_VGTK(gl)GLDFSDR_
DCTN2	Ubiquitylation	K130	0.152		_TTVK(gl)ESATEEK_
DCTN2	Ubiquitylation	K180	-1.718		_LLGPDAAINLTDPDGALAK(gl)R_
DCTN2	Phosphorylation	T198	-0.227	0.004	_TTGT(ph)PPDSSLVTYELHSRPEQDK_
DCTN2	Ubiquitylation	K234		-0.575	_VAELEK(gl)R_
DCTN2	Ubiquitylation	K294		0.417	_LQSVLGK(gl)VNEIAK_
DCTN4	Ubiquitylation	K18		-0.791	_VLYLVQGEK(gl)K_
DCTN4	Ubiquitylation	K19		-0.791	_VLYLVQGEK(gl)K_
DCTN4	Ubiquitylation	K159		-0.506	_LIEYYQQLAQKEK(gl)_
DCTN6	Ubiquitylation	K110		0.350	_MGDNNVIESK(gl)AYVGR_
DYNC1H1	Ubiquitylation	K120		1.681	_SNSLAFIK(gl)R_
DYNC1H1	Ubiquitylation	K634	-1.630		_VQYPQSQACK(gl)MSHVR_
DYNC1H1	Ubiquitylation	K652	-1.130		_DLPPVSGSIIWAK(gl)QIDR_
DYNC1H1	Ubiquitylation	K683		2.176	_LK(gl)QDGDSFR_
DYNC1H1	Ubiquitylation	K734	-1.416	1.572	_TGNVLK(gl)LK_
DYNC1H1	Ubiquitylation	K1099		1.697	_GTFDNAETK(gl)K_
DYNC1H1	Ubiquitylation	K1100		1.697	_GTFDNAETK(gl)K_
DYNC1H1	Ubiquitylation	K1115		0.283	_VQSK(gl)VNLK_
DYNC1H1	Ubiquitylation	K1917		0.777	_TESVK(gl)ALGHQLGR_
DYNC1H1	Ubiquitylation	K2043		1.456	_SLAMTK(gl)PDR_
DYNC1H1	Ubiquitylation	K2104		1.446	_SVLVSAGNVK(gl)R_
DYNC1H1	Ubiquitylation	K2239		0.473	_VLLK(gl)ALER_
DYNC1H1	Ubiquitylation	K2702		0.744	_TSDQTWVK(gl)LER_
DYNC1H1	Ubiquitylation	K3471		0.638	_ADLAAVEAK(gl)VNR_
DYNC1H1	Ubiquitylation	K3581	0.233	0.270	_WQASSLPADDLCTENAIMLK(gl)R_
DYNC1H1	Ubiquitylation	K3621	0.586	0.363	_K(gl)NLESALR_
DYNC1H1	Ubiquitylation	K3757	-0.959	0.797	_SLLQALNEVK(gl)GR_
DYNC1H1	Ubiquitylation	K4089	0.723		_AINTAVK(gl)SGR_
DYNC1H1	Ubiquitylation	K4204		2.901	_YAPLGWSKK(gl)_
DYNC1H1	Phosphorylation	T4366	0.372		_T(ph)DSTSDGRPAWMR_
DYNC1H1	Phosphorylation	S4368	0.495	0.826	_TDS(ph)TSDGRPAWMR_
DYNC1I2	Phosphorylation	S73	1.170	0.160	_EAEALLQSMGLTPES(ph)PIVPPPMS(ph)PSSK_
DYNC1I2	Phosphorylation	S81	-1.285	-1.122	_EAEALLQSMGLTPES(ph)PIVPPPMS(ph)PSSK_
DYNC1I2	Phosphorylation	S84		-1.709	_EAEALLQSMGLTPESPIVPPPMSPSS(ph)K_
DYNC1I2	Phosphorylation	S94	-0.493	0.922	_SVS(ph)TPSEAGSQDSGDGAVGSR_
DYNC1I2	Phosphorylation	T95	1.047	0.730	_SVST(ph)PSEAGSQDSGDGAVGSR_
DYNC1I2	Phosphorylation	S101		0.309	_SVSTPSEAGS(ph)QDSGDGAVGSR_
DYNC1LI1	Phosphorylation	S207	-0.595	-0.347	_DFQEYVEPGEDFPAS(ph)PQRR_
DYNC1LI1	Phosphorylation	S222		0.358	_NTASQEDKDDS(ph)VVLPLGADTLTHNLGIPVLVVCTK_
DYNC1LI1	Ubiquitylation	K385	-1.844	-1.432	_LQSLLAK(gl)QPPTAAGRPVDASPR_
DYNC1LI1	Phosphorylation	S412	-0.055		_S(ph)VSSNVASVSPIPAGSK_
DYNC1LI1	Phosphorylation	S414	0.215	-0.371	_SVS(ph)SNVASVSPIPAGSK_
DYNC1LI1	Phosphorylation	S421	-1.661	-0.915	_SVSSNVASVS(ph)PIPAGSK_
DYNC1LI1	Phosphorylation	S510	-1.903	-1.992	_KPVTVS(ph)PTTPTS(ph)PTEGEAS_
DYNC1LI1	Phosphorylation	T515		-1.148	_KPVTVS(ph)PTTPT(ph)SPTEGEAS_
DYNC1LI1	Phosphorylation	S516	-0.208	-1.103	_KPVTVS(ph)PTTPTS(ph)PTEGEAS_
DYNC1LI1	Phosphorylation	T518	-0.377	-1.333	_KPVTVSPTTPTSPT(ph)EGEAS_
DYNC1LI2	Phosphorylation	S194	0.030	0.201	_DFQDYMEPEEGCQGS(ph)PQRR_
DYNC1LI2	Phosphorylation	S205		-0.078	_GPLTSGS(ph)DEENVALPLGDNVLTHNLGIPVLVVCTK_
DYNC1LI2	Phosphorylation	S446	-0.866	0.239	_KTGSPGS(ph)PGAGGVQSTAK_
DYNC2H1	Ubiquitylation	K158		0.457	_SDTNLTK(gl)LK_
DYNC2H1	Ubiquitylation	K398		-0.876	_IIAPAEQK(gl)IAGK_
DYNC2H1	Ubiquitylation	K1248		-0.579	_AADLK(gl)DLNSR_
DYNC2H1	Ubiquitylation	K2608		-1.364	_LNSTDLK(gl)DVIKK_
DYNC2H1	Ubiquitylation	K2613		-1.117	_LNSTDLKDVIKK(gl)_
DYNC2LI1	Ubiquitylation	K151		-1.054	_TNAK(gl)AVSEMR_
GNAS	Ubiquitylation	K8	0.430	0.328	_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K17	-0.011		_GCLGNSK(gl)TEDQRNEEK(gl)AQR_
GNAS	Ubiquitylation	K32	0.249	-0.446	_QLQK(gl)DKQVYR_
GNAS	Ubiquitylation	K58	-1.182	0.161	_STIVK(gl)QM(ox)R_
GNAS	Ubiquitylation	K92	-1.333	-0.290	_ATK(gl)VQDIKNNLK_
GNAS	Ubiquitylation	K97		0.076	_VQDIK(gl)NNLK_
GNAS	Ubiquitylation	K167	-1.721		_LHALK(gl)LR_
GNAS	Ubiquitylation	K301	-0.955	-0.198	_QDLLAEK(gl)VLAGK_
GNAS	Ubiquitylation	K308		-0.472	_SK(gl)IEDYFPEFAR_
NSF	Ubiquitylation	K401	-1.546	-0.201	_MEIGLPDEK(gl)GR_
PRKACA	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACA	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PRKACB	Ubiquitylation	K30	-0.143		_AKEDFLKK(gl)_
PRKACB	Ubiquitylation	K93	0.839	0.714	_QIEHTLNEK(gl)R_
PRKACB	Phosphorylation	T243		-0.835	_T(ph)WTLCGTPEYLAPEIILSK_
PRKACB	Phosphorylation	T245	-0.116	-0.102	_TWT(ph)LCGTPEYLAPEIILSK_
RAB11A	Ubiquitylation	K69	-0.533	0.554	_VVLIGDSGVGK(gl)SNLLSR_
RAB11A	Ubiquitylation	K103	-0.360	-0.185	_SIQVDGK(gl)TIK_
RAB11A	Ubiquitylation	K106		0.335	_SIQVDGKTIK(gl)_
RAB11A	Ubiquitylation	K224	-0.187	0.901	_IVSQK(gl)QMSDRR_
RAB11B	Ubiquitylation	K69	-0.533	0.554	_VVLIGDSGVGK(gl)SNLLSR_
RAB11B	Ubiquitylation	K103	-0.360	-0.185	_SIQVDGK(gl)TIK_
RAB11B	Ubiquitylation	K106		0.335	_SIQVDGKTIK(gl)_
RAB5A	Ubiquitylation	K150	0.290	0.396	_NWVK(gl)ELQR_
RAB5A	Ubiquitylation	K168	-0.721	-0.117	_QASPNIVIALAGNK(gl)ADLASK_
RAB5A	Ubiquitylation	K174		0.735	_ADLASK(gl)R_
RAB5B	Ubiquitylation	K116	0.332	0.600	_TWVK(gl)ELQR_
RAB5B	Ubiquitylation	K150	0.290	0.396	_NWVK(gl)ELQR_
RAB5B	Ubiquitylation	K168	-0.721	-0.117	_QASPNIVIALAGNK(gl)ADLASK_
RAB5B	Ubiquitylation	K174		0.735	_ADLASK(gl)R_
RAB5C	Ubiquitylation	K150	0.290	0.396	_NWVK(gl)ELQR_
RAB5C	Ubiquitylation	K168	-0.721	-0.117	_QASPNIVIALAGNK(gl)ADLASK_
RAB5C	Ubiquitylation	K174		0.735	_ADLASK(gl)R_
STX4	Ubiquitylation	K54	-0.229		_QTIVK(gl)LGNK_
STX4	Ubiquitylation	K58	0.607	0.599	_LGNK(gl)VQELEK_
STX4	Ubiquitylation	K102	-0.242		_LQLK(gl)AIEPQKEEADENYNSVNTR_
STX4	Ubiquitylation	K108	0.674		_AIEPQK(gl)EEADENYNSVNTR_
VAMP2	Ubiquitylation	K54	0.408	0.792	_VNVDK(gl)VLER_
VAMP2	Phosphorylation	S58	-0.407	0.612	_ADALQAGAS(ph)QFETSAAK_
VAMP2	Ubiquitylation	K61	0.558	0.387	_VLERDQK(gl)LSELDDR_
VAMP2	Phosphorylation	S63		0.374	_ADALQAGASQFETS(ph)AAK_