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Query: RAB11B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RAB11B 0 1.673 -0.130 -0.140
RAB11B 0 1.673 -0.130 -0.140 0.324 0.697 0.458

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RAB11B Ubiquitylation K69 -0.533 0.554 _VVLIGDSGVGK(gl)SNLLSR_
RAB11B Ubiquitylation K106 0.335 _SIQVDGKTIK(gl)_
RAB11B Ubiquitylation K103 -0.360 -0.185 _SIQVDGK(gl)TIK_

Background Information for RAB11B:


Pubmed-RAB11B »
Uniprot-RAB11B »
Biogrid-RAB11B »
ProteomicsDB-RAB11B »

Tumorportal-RAB11B »
COSMIC-RAB11B »
GenomeRNAi-RAB11B »
Genecards-RAB11B


Protein-protein Interactions for RAB11B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait IKBKG Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB11A Cat. description Hein, Mann, Cell 2015
Category members IP bait RAB11FIP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNAP29 Cat. description Hein, Mann, Cell 2015
Category members IP bait C20orf177 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ETNK2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IFIT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NT5C3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB11B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RBM42 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SCEL Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RAB11B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members EF_GTP-bd_dom IPR000795 1.57
Category members Ran_GTPase IPR002041 1.25
Category members Small_GTPase_ARF/SAR IPR006689 0.8
Category members Small_GTPase_Ras IPR020849 0.7
Category members Small_GTPase_Rho IPR003578 0.65
Category members Small_GTPase IPR001806 0.65
Category members Small_GTPase_Rab_type IPR003579 0.51
Category members MIRO-like IPR013684 0.4
Category members Small_GTP-bd_dom IPR005225 0.32


Protein complexes (CORUM database) featuring RAB11B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RAB11B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0006913 nucleocytoplasmic transport Database 2.96
Category members GO Category GO:0006886 intracellular protein transport Database 2.48
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members Pathway Pathway_666 KEGG_ENDOCYTOSIS 0 1.25
Category members GO Category GO:0030672 synaptic vesicle membrane Database 1.16
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0030670 phagocytic vesicle membrane Database 0.37
Category members GO Category GO:0007264 small GTPase mediated signal transduction Database 0.37
Category members GO Category GO:0005622 intracellular Database 0.32
Category members GO Category GO:0006184 GTP catabolic process Database 0.29
Category members GO Category GO:0055037 recycling endosome Database 0.29
Category members GO Category GO:0008021 synaptic vesicle Database 0.28
Category members GO Category GO:0019003 GDP binding Database 0.18
Category members GO Category GO:0016023 cytoplasmic membrane-bounded vesicle Database 0.17
Category members GO Category GO:0005525 GTP binding Database 0.16
Category members GO Category GO:0003924 GTPase activity Database 0.16
Category members GO Category GO:0045335 phagocytic vesicle Database 0.16
Category members GO Category GO:0001881 receptor recycling Database 0.07
Category members Pathway Pathway_266 KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION 0 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0030054 cell junction Database 0
Category members GO Category GO:0032402 melanosome transport Database 0
Category members GO Category GO:0033572 transferrin transport Database 0
Category members GO Category GO:0035773 insulin secretion involved in cellular response to glucose stimulus Database 0
Category members GO Category GO:0044070 regulation of anion transport Database 0
Category members GO Category GO:0045055 regulated secretory pathway Database 0
Category members GO Category GO:0055038 recycling endosome membrane Database 0


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