RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
PPP1R13B	1	0.760	-0.700				-0.399	-0.481
PPP1R13B	1	0.760	-0.700
HDAC1	1	-1.980	4.450
HDAC1	1	-1.980	4.450	-0.122	0.307	0.969	0.094	0.191
ETS1	1	1.070	-0.650
TP53BP2	1	1.060	-0.800				-0.399	-0.481
PDCD4	1	-0.500	1.310	0.149
PDCD4	1	-0.500	1.310
THAP5	1	1.120	-0.910
THAP5	1	2.630	-1.100
HDAC2	1	-2.390	4.970
HDAC2	1	-2.390	4.970	0.187	-0.007	0.825
RUNX3	0	-0.550	0.450
BMP7	0
TGFB1	0	-0.550	1.050
CDK6	0	-0.190	0.160
CDK6	0	-0.190	0.160				-0.510	0.013
TAF6	0	-0.130	-0.310	-0.213	-1.092	0.653	0.100	0.301
CREB3	0	0.180	-0.820
GATA3	0	0.000	-0.660
RNF167	0	0.270	-0.510
GMNN	0	0.620	-1.000
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
ZBTB17	0	0.670	-0.540
ILKAP	0	-0.310	-0.170		-0.420	0.461
MEN1	0	1.080	-1.150	0.101			0.684	-0.063
MEN1	0	1.080	-1.150			0.395
MEN1	0	1.080	-1.150
RB1	0	1.180	-1.070		0.429	0.755
RB1	0	1.180	-1.070
RHOB	0	0.130	-0.210
HPGD	0	-0.750	0.620
CASP3	0	0.570	-0.390
CDK5	0	-1.100	1.740	-0.236			1.063	0.312
HDAC3	0	-0.790	1.070
ALOX15B	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ALOX15B	Ubiquitylation	K214		0.144	_SLNEMK(gl)R_
BMP7	Ubiquitylation	K178		-0.107	_IYK(gl)DYIR_
CASP3	Ubiquitylation	K11	-0.053	-0.687	_(ac)MENTENSVDSK(gl)SIK_
CASP3	Ubiquitylation	K14	-0.455	-0.687	_SIK(gl)NLEPK_
CASP3	Ubiquitylation	K57	-0.304	-1.817	_NFHK(gl)STGMTSR_
CASP3	Ubiquitylation	K82	-0.268	-0.605	_NLK(gl)YEVR_
CDK5	Ubiquitylation	K56	0.606	0.237	_EICLLK(gl)ELK_
CDK6	Ubiquitylation	K3	0.121	0.039	_(ac)MEK(gl)DGLCR_
CDK6	Phosphorylation	S236		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S249		0.095	_QDDS(ph)PSGASYGQDYDLS(ph)PSR_
CDK6	Phosphorylation	S385		0.649	_HSSIS(ph)PVRLPLNSSLGAELSR_
CDK6	Phosphorylation	S420	0.004	-0.202	_ES(ph)KGSPVFLPR_
CDK6	Phosphorylation	S423	-0.155	-0.297	_GS(ph)PVFLPR_
CDK6	Phosphorylation	T514	0.364	0.570	_DSKPIALKEEIVT(ph)PK_
CDK6	Phosphorylation	S681	-2.532	-2.051	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	S685		-2.729	_HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK_
CDK6	Phosphorylation	T692	-0.765	-1.849	_AIT(ph)PPQQPYK_
CDK6	Phosphorylation	S1082	-1.661	-0.980	_KETTSGTSTEPVKNS(ph)SPAPPQPAPGK_
CDK6	Phosphorylation	S1083	-1.093	-1.330	_NSS(ph)PAPPQPAPGK_
CDK6	Phosphorylation	T1244		-0.956	_RT(ph)PTMPQEEAAACPPHILPPEK_
CREB3	Ubiquitylation	K176		-0.114	_TEEQILK(gl)R_
ETS1	Ubiquitylation	K416		7.479	_MNYEK(gl)LSR_
ETS1	Ubiquitylation	K427		-0.895	_YYYDK(gl)NIIHK_
GATA3	Phosphorylation	S162	-1.195	-0.563	_DVS(ph)PDPSLSTPGSAGSAR_
GMNN	Ubiquitylation	K50	-0.622	-0.151	_ENELSAGLSK(gl)R_
GMNN	Phosphorylation	S63	0.028	-0.793	_NDHLTSTTS(ph)SPGVIVPESSENK_
HDAC1	Ubiquitylation	K50	0.036		_K(gl)MEIYRPHK_
HDAC1	Ubiquitylation	K66		-0.593	_ANAEEMTK(gl)YHSDDYIK_
HDAC1	Ubiquitylation	K74	0.620	-1.473	_YHSDDYIK(gl)FLR_
HDAC1	Ubiquitylation	K89	0.749	-0.241	_SIRPDNMSEYSK(gl)QMQR_
HDAC1	Phosphorylation	S393	-1.133	-1.144	_M(ox)LPHAPGVQM(ox)QAIPEDAIPEES(ph)GDEDEDDPDKR_
HDAC1	Phosphorylation	S409	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Phosphorylation	S410	1.326	1.144	_ISICS(ph)SDKR_
HDAC1	Ubiquitylation	K412	0.642	-0.744	_ISICSSDK(gl)R_
HDAC2	Ubiquitylation	K50	0.036		_K(gl)MEIYRPHK_
HDAC2	Ubiquitylation	K67		-0.467	_ATAEEMTK(gl)YHSDEYIK_
HDAC2	Ubiquitylation	K89	0.749	-0.241	_SIRPDNMSEYSK(gl)QMQR_
HDAC2	Ubiquitylation	K284	0.749		_GHAK(gl)CVEVVK_
HDAC2	Phosphorylation	S394	-0.865	-0.997	_M(ox)LPHAPGVQM(ox)QAIPEDAVHEDS(ph)GDEDGEDPDKR_
HDAC2	Phosphorylation	S422	0.482	0.781	_IACDEEFS(ph)DSEDEGEGGR_
HDAC3	Phosphorylation	S424		-0.354	_GPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
ILKAP	Phosphorylation	S13	-0.127	-0.533	_(ac)M(ox)DLFGDLPEPERS(ph)PRPAAGK_
MEN1	Ubiquitylation	K8	-1.132	0.088	_AAQK(gl)TLFPLR_
MEN1	Phosphorylation	S218		-0.820	_RES(ph)KPEEPPPPK_
PDCD4	Phosphorylation	S76	1.091	0.816	_GDS(ph)VSDSGSDALR_
PDCD4	Phosphorylation	T93	-0.214	0.036	_SGLTVPT(ph)SPK_
PDCD4	Phosphorylation	S94	-0.407	-0.022	_SGLTVPTS(ph)PK_
PDCD4	Ubiquitylation	K242		1.242	_SFDK(gl)LLK_
PDCD4	Ubiquitylation	K245	-0.529		_LLK(gl)DLPELALDTPR_
PDCD4	Ubiquitylation	K309	1.505		_ATVLLSMSKGGK(gl)_
PDCD4	Phosphorylation	S457	0.751	0.699	_RFVS(ph)EGDGGR_
PPP1R13B	Ubiquitylation	K102	0.149		_SQDPSLK(gl)R_
PPP1R13B	Ubiquitylation	K152	0.224		_QQQQIEAQQQLLATK(gl)EQR_
PPP1R13B	Ubiquitylation	K224	-0.390		_LVEEIEQMNNLFQQK(gl)QR_
PPP1R13B	Ubiquitylation	K234	-0.113		_ELVLAVSK(gl)VEELTR_
PPP1R13B	Ubiquitylation	K247	0.193		_VDQLSQQLEDLKK(gl)_
PPP1R13B	Ubiquitylation	K268	-0.429		_LYK(gl)ELQLR_
PPP1R13B	Ubiquitylation	K269	-0.833		_LTGPAAVELK(gl)R_
PPP1R13B	Ubiquitylation	K283	-0.866		_NKLNQEQNAK(gl)LQQQR_
PPP1R13B	Ubiquitylation	K288	-0.100	-0.011	_NQLNQEQNSK(gl)LQQQK_
PPP1R13B	Ubiquitylation	K293	-0.061		_LQQQK(gl)ELLNKR_
PPP1R13B	Ubiquitylation	K303	-0.302		_NSEVAVMDK(gl)R_
PPP1R13B	Ubiquitylation	K322	-2.045		_AALQQK(gl)ENLPVSSDGNLPQQAASAPSR_
PPP1R13B	Phosphorylation	S480	0.458	0.944	_NQS(ph)SEDILR_
PPP1R13B	Phosphorylation	S556	1.443	1.433	_VLLS(ph)PSIPSVGQDQTLSPGSK_
PPP1R13B	Phosphorylation	S569		1.774	_VLLS(ph)PSIPSVGQDQTLS(ph)PGSK_
PPP1R13B	Phosphorylation	S698	-0.309	-0.362	_IPRPLS(ph)PTK_
PPP1R13B	Phosphorylation	T700	-0.449	-0.429	_IPRPLSPT(ph)K_
PPP1R13B	Phosphorylation	S710	-0.910	-0.515	_RSS(ph)ITEPEGPGGPNIQK_
PPP1R13B	Phosphorylation	S737	-0.172	-0.748	_RSS(ph)ITEPEGPNGPNIQK_
RB1	Phosphorylation	S69	-3.602	-3.397	_TAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR_
RB1	Ubiquitylation	K97	-0.546		_LK(gl)IPDHVR_
RB1	Phosphorylation	T388	0.005	0.116	_TLQTDSIDSFETQRT(ph)PR_
RB1	Phosphorylation	T405	-0.851	-0.901	_KSNLDEEVNVIPPHT(ph)PVR_
RB1	Phosphorylation	S820		-0.019	_S(ph)PYKFPSSPLR_
RB1	Ubiquitylation	K823	-2.214		_SPYK(gl)FPSSPLR_
RB1	Phosphorylation	S827	0.824	0.111	_FPSS(ph)PLR_
RB1	Phosphorylation	S839	-0.701	-1.045	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K842		-0.751	_IPGGNIYISPLK(gl)SPYK_
RB1	Phosphorylation	S843	-0.701	-0.022	_IPGGNIYIS(ph)PLKS(ph)PYK_
RB1	Ubiquitylation	K846	-2.084		_SPYK(gl)ISEGLPTPTK_
RB1	Phosphorylation	T853	0.039	-0.555	_ISEGLPT(ph)PTKM(ox)T(ph)PR_
RB1	Ubiquitylation	K856	-1.350		_ISEGLPTPTK(gl)MTPR_
RB1	Phosphorylation	T858	-0.782	0.564	_ISEGLPT(ph)PTKMT(ph)PR_
RB1	Ubiquitylation	K879	-0.187		_FQK(gl)INQMVCNSDR_
RHOB	Ubiquitylation	K135	0.050	-0.281	_MK(gl)QEPVRTDDGR_
RNF167	Ubiquitylation	K156		0.487	_ALFVYEK(gl)GAR_
RNF167	Ubiquitylation	K210	0.646	0.758	_LTK(gl)EQLK_
RNF167	Ubiquitylation	K214	-0.449	-0.265	_EQLK(gl)QIPTHDYQK_
RNF167	Ubiquitylation	K272	-0.086	0.259	_TCPICK(gl)QPVHR_
RUNX3	Ubiquitylation	K244	0.258		_NASAVMK(gl)NQVAR_
TAF6	Ubiquitylation	K357	0.692	0.215	_ITK(gl)TFTK_
TAF6	Phosphorylation	S532	-1.108	-0.959	_AAAPPQPS(ph)PPPTK_
TAF6	Phosphorylation	S653	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TAF6	Phosphorylation	T660	-0.889	-1.013	_QEAGDS(ph)PPPAPGT(ph)PK_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
THAP5	Ubiquitylation	K360		-0.457	_LK(gl)SLEALIR_
TP53BP2	Ubiquitylation	K102	0.149		_SQDPSLK(gl)R_
TP53BP2	Ubiquitylation	K152	0.224		_QQQQIEAQQQLLATK(gl)EQR_
TP53BP2	Ubiquitylation	K224	-0.390		_LVEEIEQMNNLFQQK(gl)QR_
TP53BP2	Ubiquitylation	K234	-0.113		_ELVLAVSK(gl)VEELTR_
TP53BP2	Ubiquitylation	K268	-0.429		_LYK(gl)ELQLR_
TP53BP2	Ubiquitylation	K283	-0.866		_NKLNQEQNAK(gl)LQQQR_
TP53BP2	Ubiquitylation	K303	-0.302		_NSEVAVMDK(gl)R_
TP53BP2	Ubiquitylation	K322	-2.045		_AALQQK(gl)ENLPVSSDGNLPQQAASAPSR_
TP53BP2	Phosphorylation	S480	0.458	0.944	_NQS(ph)SEDILR_
TP53BP2	Phosphorylation	S556	1.443	1.433	_VLLS(ph)PSIPSVGQDQTLSPGSK_
TP53BP2	Phosphorylation	S569		1.774	_VLLS(ph)PSIPSVGQDQTLS(ph)PGSK_
TP53BP2	Phosphorylation	S698	-0.309	-0.362	_IPRPLS(ph)PTK_
TP53BP2	Phosphorylation	T700	-0.449	-0.429	_IPRPLSPT(ph)K_
TP53BP2	Phosphorylation	S737	-0.172	-0.748	_RSS(ph)ITEPEGPNGPNIQK_
ZBTB17	Phosphorylation	T119	-0.130	-0.375	_SLAEPAT(ph)SPGGNAEALATEGGDK_
ZBTB17	Phosphorylation	S120	-0.091	-0.316	_SLAEPATS(ph)PGGNAEALATEGGDK_