bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Category

Results for the Category
heart looping
(GO:0001947)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
W

Protein Results:

 Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
SMO 1 -0.690 1.110 1.532
MEF2A 0 0.820 -0.530
MEF2A 0 0.820 -0.530
LRP6 0 0.210 0.050
PSEN1 0 0.930 -1.110
MEF2C 0 -0.980 1.550
MEF2C 0 -0.980 1.550
HIF1A 0 -0.480 0.400
MIB1 0 0.710 -1.060 0.258
SUFU 0 1.190 -0.990
SRF 0 0.670 -1.020
WNT5A 0
TBX3 0 -0.160 0.160
GATA4 0 -0.670 0.350
BBS7 0
BBS4 0 0.310 0.160
GJA1 0 -0.410 0.430
VANGL2 0 -1.030 1.450
BBS5 0 -0.760 -0.060
BBS5 0 -0.090 0.120
BBS5 0 -0.030 0.000
HAND2 0 0.000 0.600
SMAD3 0 -1.560 1.800
SMAD3 0 0.270 -0.340
C2CD3 0 -0.390 -0.010
NKX2-5 0 -0.150 1.230 0.174 0.236
NKX2-5 0 -0.150 1.230 -0.123

PTM Sites:

 Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
BBS4 Ubiquitylation K28 -0.615 _TQFPVSTESQK(gl)PR_
BBS4 Ubiquitylation K302 -2.331 _YVAAISCLK(gl)R_
BBS4 Ubiquitylation K408 -2.242 _NALAQYQEMEK(gl)K_
BBS4 Ubiquitylation K409 -2.242 _NALAQYQEMEK(gl)K_
BBS5 Ubiquitylation K150 -1.116 _SALIQNK(gl)QLR_
BBS7 Ubiquitylation K59 -1.507 _KGEAAAVFK(gl)TLPGPK_
BBS7 Ubiquitylation K479 -0.952 _IQPK(gl)TCQVR_
BBS7 Ubiquitylation K685 -0.505 _FK(gl)GTNVK_
C2CD3 Ubiquitylation K86 -0.837 _DALQTEPK(gl)AVR_
C2CD3 Phosphorylation S2111 -1.046 -1.043 _EGPS(ph)CPSPGPFCR_
C2CD3 Phosphorylation S2114 -1.200 _EGPSCPS(ph)PGPFCR_
GATA4 Phosphorylation S109 -0.520 -0.425 _FS(ph)FPGTTGSLAAAAAAAAAR_
GATA4 Phosphorylation S407 -0.185 0.124 _LS(ph)PQGYASPVSQSPQTSSK_
GJA1 Ubiquitylation K109 0.099 _LNKK(gl)EEELK_
GJA1 Ubiquitylation K128 0.209 1.057 _VAQTDGVNVDMHLK(gl)QIEIK_
GJA1 Ubiquitylation K136 -0.888 _FK(gl)YGIEEHGK_
GJA1 Ubiquitylation K243 0.152 0.237 _GK(gl)SDPYHATSGALSPAK_
GJA1 Ubiquitylation K258 -0.280 0.063 _SDPYHATSGALSPAK(gl)DCGSQK_
GJA1 Ubiquitylation K303 -0.106 0.280 _NYNK(gl)QASEQNWANYSAEQNR_
GJA1 Ubiquitylation K345 -0.464 _MGQAGSTISNSHAQPFDFPDDNQNSK(gl)K_
GJA1 Ubiquitylation K346 -1.004 -0.300 _MGQAGSTISNSHAQPFDFPDDNQNSKK(gl)_
GJA1 Phosphorylation S364 -0.300 _LAAGHELQPLAIVDQRPS(ph)SR_
GJA1 Phosphorylation S365 -0.300 _LAAGHELQPLAIVDQRPS(ph)SR_
GJA1 Phosphorylation S372 0.940 1.430 _AS(ph)SRPRPDDLEI_
GJA1 Phosphorylation S373 0.664 0.467 _ASS(ph)RPRPDDLEI_
HAND2 Ubiquitylation K183 0.800 1.236 _K(gl)ELNEILK_
HIF1A Ubiquitylation K10 -1.686 _(ac)MEGAGGANDK(gl)K_
HIF1A Ubiquitylation K11 -1.686 _(ac)MEGAGGANDK(gl)K_
HIF1A Ubiquitylation K173 -0.662 _MK(gl)CTLTSR_
HIF1A Ubiquitylation K186 -0.590 _TMNIK(gl)SATWK_
HIF1A Ubiquitylation K252 -0.784 _HSLDM(ox)K(gl)FSYCDER_
HIF1A Ubiquitylation K371 -0.508 _PVESSDMK(gl)MTQLFTK_
HIF1A Ubiquitylation K378 -0.077 _MTQLFTK(gl)VESEDTSSLFDK_
HIF1A Ubiquitylation K390 -0.348 _VESEDTSSLFDK(gl)LKK_
HIF1A Ubiquitylation K392 -0.546 _VESEDTSSLFDKLK(gl)_
HIF1A Ubiquitylation K393 -0.451 _VESEDTSSLFDKLKK(gl)_
HIF1A Ubiquitylation K710 -1.696 _TTVPEEELNPK(gl)ILALQNAQR_
LRP6 Ubiquitylation K1443 -0.221 _GK(gl)SMISSLSIMGGSSGPPYDR_
MEF2A Ubiquitylation K23 -0.140 _QVTFTK(gl)R_
MEF2A Phosphorylation S235 0.664 -0.092 _AS(ph)PNLIGATGANSLGK_
MEF2A Phosphorylation T253 -1.271 _VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A Phosphorylation S255 -1.235 _VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A Phosphorylation S408 -0.173 -0.049 _SEPIS(ph)PPRDR_
MEF2A Phosphorylation S494 -0.858 -1.232 _GDFHSPIVLGRPPNTEDRES(ph)PSVK_
MEF2C Ubiquitylation K23 -0.140 _QVTFTK(gl)R_
MEF2C Phosphorylation S240 0.008 0.302 _NS(ph)PGLLVSPGNLNK_
MEF2C Phosphorylation S406 0.272 0.338 _SEPVS(ph)PPRDR_
MIB1 Ubiquitylation K28 -0.465 -1.379 _WGK(gl)QDGGEGHVGTVR_
MIB1 Ubiquitylation K222 -0.025 -0.938 _CVQDAK(gl)GGSFYR_
MIB1 Ubiquitylation K420 -1.942 -2.115 _LSQLLK(gl)K_
MIB1 Ubiquitylation K421 -1.850 _LSQLLKK(gl)_
MIB1 Ubiquitylation K485 -1.697 _LLLK(gl)QNVDVEAEDKDGDR_
MIB1 Ubiquitylation K726 -2.735 -2.946 _QLQDMQDVGK(gl)VDAAWEPSK_
MIB1 Ubiquitylation K749 -2.124 _NTLIMGLGTQGAEK(gl)K_
MIB1 Ubiquitylation K750 -2.385 -2.133 _NTLIMGLGTQGAEKK(gl)_
MIB1 Ubiquitylation K787 -3.370 _KGQSPLDLCPDPNLCK(gl)ALAK_
MIB1 Ubiquitylation K791 -3.063 -2.513 _GQSPLDLCPDPNLCKALAK(gl)_
MIB1 Ubiquitylation K796 -3.011 _EK(gl)VSGQVGSR_
MIB1 Ubiquitylation K854 -0.986 _CLICK(gl)EQVQSR_
MIB1 Ubiquitylation K872 -2.513 -2.977 _TKIEECVVCSDK(gl)K_
MIB1 Ubiquitylation K873 -2.513 _IEECVVCSDK(gl)K_
PSEN1 Phosphorylation S313 0.844 _VSKNS(ph)KYNAESTER_
PSEN1 Ubiquitylation K314 0.016 0.414 _NSK(gl)YNAESTER_
PSEN1 Phosphorylation S366 -0.340 0.055 _AAVQELSS(ph)SILAGEDPEER_
PSEN1 Phosphorylation S367 0.005 0.066 _AAVQELSSS(ph)ILAGEDPEER_
SMAD3 Ubiquitylation K13 -0.704 _(ac)SSILPFTPPIVK(gl)R_
SRF Phosphorylation S224 -0.512 -0.458 _ALIQTCLNSPDS(ph)PPR_
SUFU Ubiquitylation K303 -0.015 _RLSGK(gl)DTEQIR_
SUFU Ubiquitylation K321 -1.917 -1.398 _GLEINSK(gl)PVLPPINPQR_
SUFU Phosphorylation S346 0.344 0.498 _KDS(ph)LESDSSTAIIPHELIR_
TBX3 Ubiquitylation K466 -2.519 _EGTAPAK(gl)VEEAR_
VANGL2 Ubiquitylation K379 0.582 _LQEEEQK(gl)NPR_
WNT5A Ubiquitylation K268 -0.304 _VGDALK(gl)EK_


.

© Copyright Svejstrup Laboratory 2015