RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
SNW1	1	-2.350	4.480
SNW1	1	-2.350	4.480	-0.520	-1.264	-0.234	-2.391	-0.788
PML	1	-0.420	0.350		-0.244	0.322
PURB	1	-1.320	2.550
SKI	1	-1.870	2.800		-1.139	-0.588
HIPK2	0	-0.990	0.680
MEF2A	0	0.820	-0.530
MEF2A	0	0.820	-0.530
FKBP1A	0	-1.160	1.580
FKBP1A	0	1.040	-0.810
EP300	0	-1.210	1.320	-1.089			-1.694	-0.723
STUB1	0	-1.420	2.320	-0.284			0.442	-0.104
TGFBR1	0	-0.260	0.020
BMPR1A	0	0.020	-0.130
ACVR1B	0	-0.720	1.030
USP15	0	1.570	-0.780
USP15	0	1.570	-0.780	0.925	-0.319	-0.221
BMPR1B	0	-0.810	0.900
TOB1	0	1.290	-1.000
PRDM16	0	-1.320	2.300		-0.189	0.565		-1.171
HMGA2	0	0.340	-0.490
DAB2	0	0.510	-0.470
SMAD3	0	-1.560	1.800
SMAD3	0	0.270	-0.340
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
ZEB2	0	-0.420	1.170		0.364	0.973
SMAD2	0
EID2	0	-1.000	1.160
PURA	0	-0.470	0.870		0.337		-0.566	0.873

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ACVR1B	Ubiquitylation	K215		0.000	_TIVLQEIIGK(gl)GR_
BMPR1A	Ubiquitylation	K232	-0.391	0.172	_TIAK(gl)QIQMVR_
BMPR1A	Ubiquitylation	K477	0.265	-0.134	_EVVCVK(gl)R_
BMPR1B	Ubiquitylation	K477	1.033		_EIVCIK(gl)K_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DAB2	Phosphorylation	S401	-0.704	-0.722	_SSPNPFVGS(ph)PPK_
EID2	Phosphorylation	S94		-0.850	_AAAAGRES(ph)PAAAAAR_
EP300	Phosphorylation	S1038	-0.672	-0.349	_TEIKEEEDQPSTSATQSS(ph)PAPGQSK_
EP300	Phosphorylation	S1726	0.994	0.627	_LGLGLDDESNNQQAAATQS(ph)PGDSRR_
EP300	Phosphorylation	S2328	-1.092	0.725	_PQSQPPHSSPS(ph)PR_
FKBP1A	Ubiquitylation	K72	1.074		_RGQTCVVHYTGM(ox)LEDGK(gl)K_
FKBP1A	Ubiquitylation	K73	0.453		_RGQTCVVHYTGM(ox)LEDGK(gl)K_
FKBP1A	Ubiquitylation	K90	0.605	1.010	_FM(ox)LGK(gl)QEVIR_
HIPK2	Ubiquitylation	K492		-0.060	_YISQTQGLPAEYLLSAGTK(gl)TTR_
HIPK2	Ubiquitylation	K614		-0.350	_SCFQNMEICK(gl)R_
HMGA2	Phosphorylation	S44	-0.564	-0.762	_KQQQEPTGEPS(ph)PK_
HMGA2	Phosphorylation	S105	-0.055	-0.046	_KPAQEETEETSSQES(ph)AEED_
MEF2A	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2A	Phosphorylation	S235	0.664	-0.092	_AS(ph)PNLIGATGANSLGK_
MEF2A	Phosphorylation	T253		-1.271	_VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S255		-1.235	_VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S408	-0.173	-0.049	_SEPIS(ph)PPRDR_
MEF2A	Phosphorylation	S494	-0.858	-1.232	_GDFHSPIVLGRPPNTEDRES(ph)PSVK_
PML	Ubiquitylation	K394	0.515	0.360	_LQDLSSCITQGK(gl)DAAVSKK_
PML	Phosphorylation	S403		3.141	_KAS(ph)PEAASTPRDPIDVDLPEEAER_
PML	Ubiquitylation	K476	-0.403	-0.735	_GPSYGEDVSNTTTAQK(gl)R_
PML	Phosphorylation	S504	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S505	-0.198	-0.109	_S(ph)SPEQPRPSTSK_
PML	Phosphorylation	S518	-1.632	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S527	-1.392	-1.605	_AVS(ph)PPHLDGPPS(ph)PR_
PML	Phosphorylation	S530	0.466	0.093	_S(ph)PVIGSEVFLPNSNHVASGAGEAEER_
PML	Ubiquitylation	K623		-0.784	_IDNETQK(gl)ISQLAAVNR_
PRDM16	Phosphorylation	S62	-1.041	-0.744	_EGS(ph)PYKAPIYIPDDIPIPAEFELR_
PRDM16	Phosphorylation	S1039	-0.074	0.136	_NFIGNSNHGSQS(ph)PR_
PURA	Ubiquitylation	K97	0.301		_IAEVGAGGNK(gl)SR_
PURB	Phosphorylation	S6	-0.526	0.688	_(ac)ADGDS(ph)GSERGGGGGPCGFQPASR_
PURB	Phosphorylation	S8		0.527	_(ac)ADGDSGS(ph)ERGGGGGPCGFQPASR_
PURB	Ubiquitylation	K70	1.141		_IAEVGAGGSK(gl)SR_
PURB	Phosphorylation	S100	0.095	0.006	_DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPR_
PURB	Phosphorylation	S101	-0.621	-0.506	_DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPR_
PURB	Phosphorylation	S304	0.666	0.610	_RGGGSGGGEES(ph)EGEEVDED_
SKI	Ubiquitylation	K294	-0.126	-0.054	_AYILLSQDYTGK(gl)EEQAR_
SKI	Ubiquitylation	K365	-0.244	-0.390	_TLAGSSNK(gl)SLGCVHPR_
SKI	Phosphorylation	S431		-0.475	_VVS(ph)SPPCAAAVSR_
SKI	Phosphorylation	S432	-0.742	-0.438	_VVSS(ph)PPCAAAVSR_
SKI	Phosphorylation	S480	-1.160	-1.491	_LTVDTPGAPETLAPVAAPEEDKDS(ph)EAEVEVESR_
SMAD2	Phosphorylation	T8	-0.896	-0.885	_(ac)SSILPFT(ph)PPVVK_
SMAD2	Ubiquitylation	K13	-0.058		_(ac)SSILPFTPPVVK(gl)R_
SMAD3	Ubiquitylation	K13	-0.704		_(ac)SSILPFTPPIVK(gl)R_
SNW1	Ubiquitylation	K193	1.500		_YTPSQQGVAFNSGAK(gl)QR_
SNW1	Phosphorylation	S224	-0.528	0.034	_GPPS(ph)PPAPVMHSPS(ph)RK_
SNW1	Phosphorylation	S232	-1.645	-1.722	_GPPS(ph)PPAPVMHS(ph)PSR_
SNW1	Phosphorylation	S234		-1.881	_GPPS(ph)PPAPVMHSPS(ph)RK_
STUB1	Phosphorylation	S19	0.041	0.082	_LGAGGGS(ph)PEKS(ph)PSAQELK_
STUB1	Ubiquitylation	K22	0.017	-0.536	_LGAGGGSPEK(gl)SPSAQELK_
STUB1	Phosphorylation	S23	0.078	0.165	_LGAGGGS(ph)PEKS(ph)PSAQELK_
STUB1	Ubiquitylation	K30	-0.704	-0.765	_SPSAQELK(gl)EQGNR_
STUB1	Ubiquitylation	K41	-0.158		_K(gl)YPEAAACYGR_
STUB1	Ubiquitylation	K125	0.325	-0.191	_AYSLAK(gl)EQR_
STUB1	Phosphorylation	S273	-0.431	-0.250	_S(ph)PLTQEQLIPNLAMK_
TGFBR1	Ubiquitylation	K449	-0.991		_VVCEQK(gl)LRPNIPNR_
TGFBR1	Ubiquitylation	K502	0.553	0.430	_TLSQLSQQEGIK(gl)M_
TOB1	Phosphorylation	T204	-0.200	0.244	_T(ph)SPINLGLNVNDLLK_
TOB1	Phosphorylation	S205	-0.200	0.244	_T(ph)SPINLGLNVNDLLK_
USP15	Phosphorylation	S225	-0.837		_GPS(ph)TPKKPLEQSC_
USP15	Phosphorylation	T226	-1.049	-0.318	_GPST(ph)PKKPLEQSC_
USP15	Phosphorylation	S229	0.423	0.578	_S(ph)PGASNFSTLPK_
ZEB2	Phosphorylation	S1124		0.491	_AYLQSITPQGYSDS(ph)EERESMPR_