RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GSK3B	2	1.020	-0.870				-1.128	1.091
ATF2	2	-1.380	1.800
NIPBL	2	-0.180	-0.270
NIPBL	2	-0.180	-0.270		1.066	1.181
NIPBL	2	-0.180	-0.270	0.759			0.809	0.590
TBL1Y	1	-1.630	3.050	0.090	-3.400	0.909	0.103	0.241
CBY1	1	-1.700	3.270
CCND1	1	-1.820	3.470
TRIM32	1	0.220	0.640	-1.832			-0.176	-1.091
BBS2	1	-0.810	0.820
MED1	1	0.780	-0.520				-1.530	-0.219
SDF4	0	-0.050	0.200
RUNX1T1	0	0.840	-0.680
OSBPL8	0	0.270	-0.840		-1.590	-0.451	0.036	0.268
TBL1X	0	-0.240	-0.140	0.090	-3.400	0.909	0.103	0.241
AKT2	0	-1.420	2.210	-0.194
BBS7	0
BBS4	0	0.310	0.160
OSBPL11	0	-0.210	-0.470	0.222			-0.178	-0.416
TCF7L2	0	-0.550	0.790	-0.741
HMGA2	0	0.340	-0.490
ARID5B	0	0.580	-0.330
TTC8	0	0.800	-1.070
EIF2AK3	0	0.010	0.340
ID4	0	0.670	-0.690
CEBPB	0	0.400	-0.930
NOC3L	0	1.130	-0.990	0.111			0.751	0.455
ADIG	0	0.390	-0.770
PLCB1	0	-0.300	-0.220

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ADIG	Phosphorylation	S133	-0.087	0.173	_GPSPSPAS(ph)QM(ox)TSSPAGSR_
ADIG	Ubiquitylation	K169		0.830	_GLK(gl)AGLGR_
AKT2	Ubiquitylation	K14	0.306	0.070	_EGWLHK(gl)R_
AKT2	Ubiquitylation	K111	1.082		_AIQMVANSLK(gl)QR_
AKT2	Ubiquitylation	K160		0.251	_LLGK(gl)GTFGK_
AKT2	Phosphorylation	T451	-0.091	-0.612	_YFDDEFTAQSITIT(ph)PPDRYDSLGLLELDQR_
AKT2	Phosphorylation	Y456		-0.265	_YFDDEFTAQSITITPPDRY(ph)DSLGLLELDQR_
ARID5B	Phosphorylation	S264	0.496	0.623	_RDS(ph)FSGVK_
ATF2	Phosphorylation	T71	-1.263	-1.166	_NDSVIVADQTPT(ph)PTR_
ATF2	Phosphorylation	S90	2.624	2.389	_NCEEVGLFNELAS(ph)PFENEFKK_
ATF2	Phosphorylation	S112	1.025	1.118	_MPLDLS(ph)PLATPIIR_
BBS2	Ubiquitylation	K231		-0.482	_FGYALSNGTVGVYDK(gl)TSR_
BBS2	Ubiquitylation	K360		-1.721	_NYEENAK(gl)AELASPLNEADGHR_
BBS2	Phosphorylation	S365		2.366	_AELAS(ph)PLNEADGHR_
BBS2	Ubiquitylation	K659		-0.582	_DLLNGYK(gl)IR_
BBS4	Ubiquitylation	K28		-0.615	_TQFPVSTESQK(gl)PR_
BBS4	Ubiquitylation	K302		-2.331	_YVAAISCLK(gl)R_
BBS4	Ubiquitylation	K408		-2.242	_NALAQYQEMEK(gl)K_
BBS4	Ubiquitylation	K409		-2.242	_NALAQYQEMEK(gl)K_
BBS7	Ubiquitylation	K59		-1.507	_KGEAAAVFK(gl)TLPGPK_
BBS7	Ubiquitylation	K479		-0.952	_IQPK(gl)TCQVR_
BBS7	Ubiquitylation	K685		-0.505	_FK(gl)GTNVK_
CBY1	Phosphorylation	S9	-0.597	-0.810	_PFFGNTFS(ph)PK_
CBY1	Phosphorylation	S20	0.383	0.563	_SAS(ph)LSNLHSLDR_
CCND1	Ubiquitylation	K33		-0.490	_AMLK(gl)AEETCAPSVSYFK_
CCND1	Ubiquitylation	K46	-1.016	-0.036	_AEETCAPSVSYFK(gl)CVQK_
CCND1	Ubiquitylation	K95	-0.733	-0.137	_FLSLEPVK(gl)K_
CCND1	Ubiquitylation	K96	-0.846	-0.155	_FLSLEPVKK(gl)_
CCND1	Ubiquitylation	K238		0.245	_VIK(gl)CDPDCLR_
CEBPB	Phosphorylation	S231		-0.660	_AYLGYQAVPSGSSGSLSTSSSSS(ph)PPGTPSPADAK_
EIF2AK3	Phosphorylation	S715		0.832	_EHIEIIAPS(ph)PQR_
GSK3B	Phosphorylation	S9	-0.483	0.010	_TTS(ph)FAESCKPVQQPSAFGSMK_
GSK3B	Ubiquitylation	K85		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Ubiquitylation	K86		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Phosphorylation	S215	0.296	0.477	_GEPNVS(ph)YICSR_
GSK3B	Phosphorylation	Y216	0.356	0.376	_GEPNVSY(ph)ICSR_
GSK3B	Phosphorylation	T390	2.800	2.527	_IQAAAST(ph)PTNATAASDANTGDR_
HMGA2	Phosphorylation	S44	-0.564	-0.762	_KQQQEPTGEPS(ph)PK_
HMGA2	Phosphorylation	S105	-0.055	-0.046	_KPAQEETEETSSQES(ph)AEED_
ID4	Phosphorylation	S5	-0.437	-0.234	_AVS(ph)PVRPSGR_
MED1	Phosphorylation	S664		3.368	_DNPAQDFSTLYGSS(ph)PLER_
MED1	Phosphorylation	S771	-1.422		_LSS(ph)SDSIGPDVTDILSDIAEEASKLPSTSDDCPAIGTPLR_
MED1	Phosphorylation	T1051	-1.201	-1.247	_SQT(ph)PPGVATPPIPK_
MED1	Phosphorylation	T1057		-1.294	_SQT(ph)PPGVAT(ph)PPIPK_
MED1	Phosphorylation	S1155	0.689		_NSSQSGGKPGS(ph)SPITK_
MED1	Phosphorylation	S1156	0.829	1.055	_NSSQSGGKPGSS(ph)PITK_
MED1	Phosphorylation	S1192		-0.792	_PSSLM(ox)NPSLSKPNIS(ph)PSHSRPPGGSDK_
MED1	Phosphorylation	S1223	1.061	1.013	_AKS(ph)PISSGSGGSHM(ox)SGTSSSSGM(ox)K_
MED1	Phosphorylation	S1433	-0.191		_NYGS(ph)PLISGSTPK_
NIPBL	Phosphorylation	S178	0.767	1.039	_NNTAAETEDDES(ph)DGEDRGGGTSGVR_
NIPBL	Phosphorylation	S280	0.496	0.816	_SPQPVCS(ph)PAGSEGTPK_
NIPBL	Phosphorylation	S284	0.172	0.245	_SPQPVCSPAGS(ph)EGTPK_
NIPBL	Phosphorylation	S305	0.703		_GSRPPLILQSQSLPCS(ph)SPR_
NIPBL	Phosphorylation	S306	0.689	0.413	_GSRPPLILQSQSLPCSS(ph)PR_
NIPBL	Phosphorylation	S318	-0.415	-0.625	_DVPPDILLDS(ph)PERK_
NIPBL	Phosphorylation	S349	0.713	0.649	_AAMYDIIS(ph)SPSKDSTK_
NIPBL	Phosphorylation	S350	0.226	0.375	_AAMYDIISS(ph)PSK_
NIPBL	Phosphorylation	S553	2.102	1.878	_VDS(ph)QASITQDSDSIK_
NIPBL	Phosphorylation	T599	0.308		_STPENHPET(ph)PKKK_
NIPBL	Phosphorylation	T713	-0.940	-0.779	_GESRPET(ph)PKQK_
NIPBL	Ubiquitylation	K1628	0.366		_DAVTSK(gl)MDQGSIER_
NIPBL	Phosphorylation	S2658	0.412	0.260	_AITSLLGGGS(ph)PK_
NIPBL	Phosphorylation	S2672	0.868		_NNTAAETEDDES(ph)DGEDRGGGTSGSLR_
OSBPL11	Phosphorylation	S179		0.034	_SFSLASSS(ph)NSPISQR_
OSBPL11	Phosphorylation	S181	-0.143	-0.159	_SFSLASSSNS(ph)PISQR_
OSBPL11	Phosphorylation	S189	0.718	0.168	_RPS(ph)QNAISFFNVGHSK_
OSBPL8	Phosphorylation	T13	0.040		_(ac)M(ox)EGGLADGEPDRT(ph)SLLGDSKDVLGPSTVVANSDESQLLTPGK_
OSBPL8	Phosphorylation	S14	0.237	0.627	_(ac)MEGGLADGEPDRTS(ph)LLGDSK_
OSBPL8	Phosphorylation	T39		-0.210	_DVLGPSTVVANSDESQLLT(ph)PGK_
OSBPL8	Phosphorylation	S63	-0.125	0.863	_DLHQPS(ph)LSPASPHSQGFER_
OSBPL8	Phosphorylation	S65	-0.155	0.044	_DLHQPSLS(ph)PASPHSQGFER_
OSBPL8	Phosphorylation	S68	-0.891	-0.231	_DLHQPSLSPAS(ph)PHSQGFER_
OSBPL8	Phosphorylation	S71		0.689	_DLHQPSLSPASPHS(ph)QGFER_
OSBPL8	Phosphorylation	S120	1.496	1.221	_KES(ph)LKVQK_
OSBPL8	Ubiquitylation	K698	0.085	-0.077	_AINAK(gl)DQTEATQEK_
PLCB1	Phosphorylation	S1199	-0.494		_TPS(ph)SEELGGDIPGKEFDTPL_
PLCB1	Phosphorylation	S1200		-0.483	_TPSS(ph)EELGGDIPGKEFDTPL_
RUNX1T1	Ubiquitylation	K489	0.393		_K(gl)AEEAVNEVK_
SDF4	Ubiquitylation	K165		0.147	_VK(gl)FLASK_
TBL1X	Ubiquitylation	K102	-0.183		_DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TBL1Y	Ubiquitylation	K102	-0.183		_DK(gl)LAQQQAAAAAAAAAAASQQGSAK_
TCF7L2	Ubiquitylation	K88	-0.867	-0.222	_ESLEEAAK(gl)R_
TRIM32	Ubiquitylation	K175	0.333	-0.305	_AALEGVSK(gl)DLQAR_
TRIM32	Ubiquitylation	K204		1.221	_K(gl)FFTGSLAEVEK_
TRIM32	Ubiquitylation	K405	2.753		_GFLK(gl)EIRR_
TRIM32	Ubiquitylation	K506	0.638		_GSGVVK(gl)YSCLCSAVRPK_
TTC8	Ubiquitylation	K184		-0.765	_LNLTK(gl)YSQKPK_
TTC8	Ubiquitylation	K259		0.324	_VQIGK(gl)CYYR_