bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: RUNX1T1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
RUNX1T1 0 0.393 0.840 -0.680

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
RUNX1T1 Ubiquitylation K489 0.393 _K(gl)AEEAVNEVK_

Background Information for RUNX1T1:


Pubmed-RUNX1T1 »
Uniprot-RUNX1T1 »
Biogrid-RUNX1T1 »
ProteomicsDB-RUNX1T1 »

Tumorportal-RUNX1T1 »
COSMIC-RUNX1T1 »
GenomeRNAi-RUNX1T1 »
Genecards-RUNX1T1


Protein-protein Interactions for RUNX1T1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BSPRY Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C22orf41 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRDM14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSMC5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TCF4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in RUNX1T1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_MYND IPR002893 0.06
Category members TAFH_NHR1 IPR003894 0
Category members ETO IPR013289 0
Category members NHR2 IPR014896 0


Protein complexes (CORUM database) featuring RUNX1T1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring RUNX1T1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016363 nuclear matrix Database 1.89
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members Disease phenotype COLORECTAL_CANCER COLORECTAL CANCER Database 0.29
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members Pathway Pathway_24 KEGG_PATHWAYS_IN_CANCER 0 0
Category members Pathway Pathway_606 KEGG_ACUTE_MYELOID_LEUKEMIA 0 0
Category members Disease phenotype Acute_myeloid_leukemia_with_t(8;21)(q22;q22)_translocation Acute myeloid leukemia with t(8;21)(q22;q22) translocation Database 0
Category members GO Category GO:0006091 generation of precursor metabolites and energy Database 0
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0
Category members GO Category GO:0045444 fat cell differentiation Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0051101 regulation of DNA binding Database 0


.

© Copyright Svejstrup Laboratory 2015