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Query: SDF4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SDF4 0 0.347 -0.050 0.200

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SDF4 Ubiquitylation K165 0.147 _VK(gl)FLASK_

Background Information for SDF4:


Pubmed-SDF4 »
Uniprot-SDF4 »
Biogrid-SDF4 »
ProteomicsDB-SDF4 »

Tumorportal-SDF4 »
COSMIC-SDF4 »
GenomeRNAi-SDF4 »
Genecards-SDF4


Protein-protein Interactions for SDF4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARMC6 Cat. description Hein, Mann, Cell 2015
Category members IP bait C9orf126;SCAI Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC132 Cat. description Hein, Mann, Cell 2015
Category members IP bait CEP44 Cat. description Hein, Mann, Cell 2015
Category members IP bait ITGB3BP Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF2C Cat. description Hein, Mann, Cell 2015
Category members IP bait MYC Cat. description Hein, Mann, Cell 2015
Category members IP bait PLK4 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP1R3B Cat. description Hein, Mann, Cell 2015
Category members IP bait THOC2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait YWHAZ Cat. description Hein, Mann, Cell 2015
Category members IP bait ATP2B2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SDF4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SDF4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members EF_hand_dom IPR002048 0


Protein complexes (CORUM database) featuring SDF4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SDF4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0009650 UV protection Database 0.68
Category members GO Category GO:0005796 Golgi lumen Database 0.64
Category members GO Category GO:0042802 identical protein binding Database 0.26
Category members GO Category GO:0021549 cerebellum development Database 0.14
Category members GO Category GO:0005509 calcium ion binding Database 0.11
Category members GO Category GO:0045471 response to ethanol Database 0.1
Category members GO Category GO:0005770 late endosome Database 0.09
Category members GO Category GO:0032059 bleb Database 0.08
Category members GO Category GO:0017156 calcium ion-dependent exocytosis Database 0
Category members GO Category GO:0045444 fat cell differentiation Database 0


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