RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
CNTN1	1	-1.210	1.700				-0.706	2.148
SEMA4C	1	-1.890	3.770
NR2C2	1	-2.470	4.780
NFIX	0	-0.150	0.520
NFIX	0	-0.150	0.520	-0.711	0.025	0.306		1.031
SDF4	0	-0.050	0.200
NCOA1	0	1.240	-0.460
ATRN	0	0.130	-0.430				-0.905	-0.301
PTPRS	0	0.140	0.270				-0.194	0.365
PFDN1	0	0.040	-0.360
AGTPBP1	0	0.040	0.160				0.227	0.437
ATIC	0	-0.830	0.480				-0.329	0.553
ATP2B2	0	1.540	-0.900				0.593	0.487
CDK5	0	-1.100	1.740	-0.236			1.063	0.312
LDB1	0	0.670	-0.650	-1.168

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AGTPBP1	Ubiquitylation	K5		-0.263	_LK(gl)VIPEK_
AGTPBP1	Phosphorylation	T1167	0.976		_VT(ph)SPTTYVLDEDEPR_
AGTPBP1	Phosphorylation	S1168	1.039	0.594	_VTS(ph)PTTYVLDEDEPR_
ATIC	Ubiquitylation	K195	-0.448		_K(gl)QYSKGVSQMPLR_
ATIC	Ubiquitylation	K199	-0.427	-0.247	_QYSK(gl)GVSQMPLR_
ATIC	Ubiquitylation	K397	0.429		_NNGVVDK(gl)SLFSNVVTK_
ATIC	Ubiquitylation	K406	0.213	0.405	_SLFSNVVTK(gl)NK_
ATIC	Ubiquitylation	K408	0.438	0.468	_SLFSNVVTKNK(gl)_
ATP2B2	Ubiquitylation	K15	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Phosphorylation	S17	0.515	0.902	_NS(ph)LKEANHDGDFGITLAELR_
ATP2B2	Ubiquitylation	K19	1.343		_(ac)GDMANNSVAYSGVK(gl)NSLK_
ATP2B2	Ubiquitylation	K48	1.326		_K(gl)IQESYGDVYGICTK_
ATP2B2	Ubiquitylation	K62	0.733		_IQESYGDVYGICTK(gl)LK_
ATP2B2	Ubiquitylation	K64	0.642	0.801	_LK(gl)TSPNEGLSGNPADLER_
ATP2B2	Ubiquitylation	K193	-0.102	0.773	_IEQEQK(gl)FTVIR_
ATP2B2	Ubiquitylation	K365		0.997	_SVLQGK(gl)LTK_
ATP2B2	Ubiquitylation	K747	1.309		_NEK(gl)GEIEQER_
ATP2B2	Ubiquitylation	K773		-0.186	_SSPTDK(gl)HTLVK_
ATP2B2	Ubiquitylation	K807	0.010	1.083	_QVVAVTGDGTNDGPALKK(gl)_
ATP2B2	Ubiquitylation	K921	-0.811	0.202	_NK(gl)PLISR_
ATP2B2	Phosphorylation	S1177	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1178	0.214	0.537	_S(ph)SIHNFM(ox)THPEFR_
ATP2B2	Phosphorylation	S1193	-0.342	-0.629	_IEDS(ph)EPHIPLIDDTDAEDDAPTKR_
ATRN	Ubiquitylation	K1418	-0.525		_K(gl)QQPPAQPGTCI_
CDK5	Ubiquitylation	K56	0.606	0.237	_EICLLK(gl)ELK_
LDB1	Ubiquitylation	K76		-0.052	_IFELNK(gl)R_
LDB1	Ubiquitylation	K271		-0.154	_DCLK(gl)TCLFQK_
LDB1	Ubiquitylation	K277	-1.611	-0.630	_TCLFQK(gl)WQR_
LDB1	Phosphorylation	S323	-0.402	-0.031	_KS(ph)PASTFALSSQVPDVMVVGEPTLMGGEFGDEDER_
NCOA1	Phosphorylation	S22	0.503	0.810	_KGS(ph)PCDTLASSTEK_
NFIX	Phosphorylation	S273	-0.356		_S(ph)ITSPPSTSTTK_
NFIX	Phosphorylation	S294		-1.873	_TISIDENM(ox)EPSPTGDFYPSPS(ph)SPAAGSR_
NFIX	Phosphorylation	S295	-1.280		_TISIDENMEPSPTGDFYPSPSS(ph)PAAGSR_
NFIX	Phosphorylation	S300	-1.728		_TISIDENM(ox)EPSPTGDFYPSPSSPAAGS(ph)R_
NFIX	Phosphorylation	S311	1.021	0.671	_DQDMS(ph)SPTTM(ox)K_
NFIX	Phosphorylation	S312	0.764	0.746	_DQDMSS(ph)PTTMK_
NFIX	Phosphorylation	T314		0.827	_DQDMSSPT(ph)TMK_
NFIX	Phosphorylation	S325		0.852	_KPEKPLFS(ph)SASPQDSSPR_
NFIX	Phosphorylation	S328	1.295	0.637	_KPEKPLFSSAS(ph)PQDSSPR_
NFIX	Phosphorylation	S332	-0.428	-1.102	_KPEKPLFSSASPQDS(ph)SPR_
NFIX	Phosphorylation	S333	-0.428		_KPEKPLFSSASPQDS(ph)SPR_
NR2C2	Ubiquitylation	K250	-0.596		_SPLIATPTFVADK(gl)DGAR_
NR2C2	Phosphorylation	S370	-0.170		_DQS(ph)TPIIEVEGPLLSDTHVTFK_
NR2C2	Phosphorylation	T371	0.442	-0.117	_DQST(ph)PIIEVEGPLLSDTHVTFK_
PFDN1	Ubiquitylation	K10	0.055	0.702	_(ac)AAPVDLELK(gl)K_
PFDN1	Ubiquitylation	K11	0.290	0.616	_K(gl)AFTELQAK_
PFDN1	Ubiquitylation	K28	0.985		_VK(gl)LADIQIEQLNR_
PFDN1	Ubiquitylation	K97	-0.053		_IKELEQK(gl)K_
PFDN1	Ubiquitylation	K106	0.479		_SVK(gl)EAEDNIR_
PTPRS	Ubiquitylation	K1650	-0.595	-1.027	_LLASSK(gl)AHTSR_
PTPRS	Ubiquitylation	K1665	-0.790		_FISANLPCNK(gl)FK_
SDF4	Ubiquitylation	K165		0.147	_VK(gl)FLASK_
SEMA4C	Ubiquitylation	K481		-1.114	_SLVLSQSK(gl)K_
SEMA4C	Ubiquitylation	K482		-1.114	_SLVLSQSK(gl)K_