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Query: ATRN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ATRN 0 -1.731 0.130 -0.430 -0.905 -0.301

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ATRN Ubiquitylation K1418 -0.525 _K(gl)QQPPAQPGTCI_

Background Information for ATRN:


Pubmed-ATRN »
Uniprot-ATRN »
Biogrid-ATRN »
ProteomicsDB-ATRN »

Tumorportal-ATRN »
COSMIC-ATRN »
GenomeRNAi-ATRN »
Genecards-ATRN


Protein-protein Interactions for ATRN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BTNL8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MGRN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTPRK Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ATRN
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members EG-like_dom IPR000742 1.74
Category members Kelch_1 IPR006652 0.44
Category members C-type_lectin IPR001304 0.21
Category members CUB_dom IPR000859 0.04
Category members EGF_laminin IPR002049 0.04
Category members C-type_lectin_fold IPR016187 0.01
Category members Plexin_repeat IPR002165 0
Category members Plexin-like_fold IPR016201 0


Protein complexes (CORUM database) featuring ATRN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ATRN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005615 extracellular space Database 4.72
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0006954 inflammatory response Database 0.49
Category members GO Category GO:0040014 regulation of multicellular organism growth Database 0.35
Category members GO Category GO:0007275 multicellular organismal development Database 0.31
Category members GO Category GO:0042552 myelination Database 0.16
Category members GO Category GO:0021549 cerebellum development Database 0.14
Category members GO Category GO:0004872 receptor activity Database 0
Category members GO Category GO:0006979 response to oxidative stress Database 0
Category members GO Category GO:0030246 carbohydrate binding Database 0
Category members GO Category GO:0043473 pigmentation Database 0


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