RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
JUN	3	-0.930	0.930			-0.126
RICTOR	1	-0.330	0.710
RICTOR	1	-0.270	0.570
NRARP	1	0.370	-0.770
FLT4	0	0.940	-0.560
FGFR3	0	-1.120	1.390
NRP1	0	0.880	-0.670				0.909	0.353
HIF1A	0	-0.480	0.400
PRKD2	0	0.050	0.170	0.914
PRKD2	0	0.050	0.170
WNT5A	0
PROX1	0	0.800	-0.550
ARG1	0	-0.170	0.640					-4.678
KDR	0	0.860	-0.680
RPTOR	0	0.520	-1.030				0.623	0.466
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
ARNT	0	1.120	-0.500
BMP6	0	1.970	-0.630
PRKCA	0	0.750	-0.690				0.349	0.585
PRKCA	0	0.750	-0.690
HMGB2	0	-0.350	0.170			-1.810	0.655	0.285
AGGF1	0	-0.430	0.460
EGFL7	0	-1.200	1.990
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
NF1	0	1.000	-0.500				0.444	-0.190
MTOR	0	-0.680	0.150	0.757			0.074	0.101
PDCD6	0	-1.230	2.040	-0.156	-0.537	0.910	-0.243	-0.371

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AGGF1	Phosphorylation	S7	-1.807	-1.864	_(ac)ASEAPS(ph)PPRS(ph)PPPPTSPEPELAQLR_
AGGF1	Phosphorylation	S11	-1.807	-1.864	_(ac)ASEAPS(ph)PPRS(ph)PPPPTSPEPELAQLR_
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
ARNT	Phosphorylation	S81		1.133	_FARS(ph)DDEQSSADKER_
ARNT	Ubiquitylation	K421		-2.502	_DSFQQVVK(gl)LK_
BMP6	Ubiquitylation	K409		-1.025	_VSSASDYNSSELK(gl)TACR_
EGFL7	Ubiquitylation	K93		-1.651	_YACCPGWK(gl)R_
FGFR3	Ubiquitylation	K205		-0.115	_IGGIK(gl)LR_
FLT4	Ubiquitylation	K987		-0.270	_FSK(gl)TEGGAR_
FLT4	Ubiquitylation	K1064		-1.119	_DIYK(gl)DPDYVR_
HIF1A	Ubiquitylation	K10		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K11		-1.686	_(ac)MEGAGGANDK(gl)K_
HIF1A	Ubiquitylation	K173		-0.662	_MK(gl)CTLTSR_
HIF1A	Ubiquitylation	K186		-0.590	_TMNIK(gl)SATWK_
HIF1A	Ubiquitylation	K252		-0.784	_HSLDM(ox)K(gl)FSYCDER_
HIF1A	Ubiquitylation	K371		-0.508	_PVESSDMK(gl)MTQLFTK_
HIF1A	Ubiquitylation	K378		-0.077	_MTQLFTK(gl)VESEDTSSLFDK_
HIF1A	Ubiquitylation	K390		-0.348	_VESEDTSSLFDK(gl)LKK_
HIF1A	Ubiquitylation	K392		-0.546	_VESEDTSSLFDKLK(gl)_
HIF1A	Ubiquitylation	K393		-0.451	_VESEDTSSLFDKLKK(gl)_
HIF1A	Ubiquitylation	K710		-1.696	_TTVPEEELNPK(gl)ILALQNAQR_
HMGB2	Ubiquitylation	K114	0.323		_IK(gl)SEHPGLSIGDTAK_
HMGB2	Ubiquitylation	K128	0.363		_K(gl)LGEMWSEQSAK_
HMGB2	Ubiquitylation	K147	0.205	-0.408	_DKQPYEQK(gl)AAK_
HMGB2	Ubiquitylation	K150	-0.251		_DKQPYEQKAAK(gl)_
JUN	Phosphorylation	S58	-0.167	-1.247	_AKNS(ph)DLLTSPDVGLLK_
JUN	Phosphorylation	T62	2.545	1.674	_NSDLLT(ph)SPDVGLLK_
JUN	Phosphorylation	S63	2.030	1.458	_NSDLLTS(ph)PDVGLLK_
JUN	Ubiquitylation	K70	9.213		_NSDLLTSPDVGLLK(gl)_
JUN	Phosphorylation	S73	1.499	0.845	_LAS(ph)PELER_
JUN	Phosphorylation	S243	-0.642	-1.399	_LQALKEEPQTVPEMPGETPPLS(ph)PIDMESQER_
JUN	Ubiquitylation	K309	1.034	0.155	_EQVAQLK(gl)QK_
KDR	Ubiquitylation	K1064		-1.119	_DIYK(gl)DPDYVR_
MTOR	Ubiquitylation	K309	-0.762	0.065	_DLMGFGTK(gl)PR_
MTOR	Ubiquitylation	K1257	-1.167	-0.901	_SGQGDALASGPVETGPMKK(gl)_
MTOR	Ubiquitylation	K1395		-1.255	_AYAK(gl)ALHYK_
MTOR	Ubiquitylation	K2066		-1.004	_GPQTLK(gl)ETSFNQAYGR_
MTOR	Ubiquitylation	K2166		-1.304	_IQSIAPSLQVITSK(gl)QRPR_
MTOR	Phosphorylation	T2471		0.329	_KT(ph)GTTVPESIHSFIGDGLVKPEALNK_
NF1	Ubiquitylation	K471		0.218	_MAPSLTFKEK(gl)_
NF1	Phosphorylation	S864		-0.458	_SNSGLATYS(ph)PPMGPVSER_
NF1	Phosphorylation	T2514		0.076	_GSEGYLAATYPTVGQT(ph)SPR_
NF1	Phosphorylation	S2515	0.071	0.316	_GSEGYLAATYPTVGQTS(ph)PR_
NF1	Phosphorylation	S2543	0.698	0.655	_S(ph)FDHLISDTK_
NRARP	Phosphorylation	S2		1.670	_(ac)S(ph)QAELSTCSAPQTQR_
NRARP	Ubiquitylation	K24		-0.011	_IFQEAVRK(gl)_
PDCD6	Ubiquitylation	K112	0.803	-0.435	_TYDRDNSGMIDK(gl)NELK_
PRKCA	Phosphorylation	S10	-0.650	0.036	_(ac)ADVFPGNDS(ph)TASQDVANR_
PRKCA	Phosphorylation	S13	-1.038	0.335	_(ac)ADVFPGNDSTAS(ph)QDVANR_
PRKCA	Phosphorylation	S226	0.693	0.415	_STLNPQWNES(ph)FTFK_
PRKCA	Ubiquitylation	K316	-0.522	-0.535	_LGPAGNK(gl)VISPSEDR_
PRKD1	Phosphorylation	S207	0.941	1.048	_RLS(ph)NVSLTGVSTIR_
PRKD1	Phosphorylation	T219	-0.068	-0.162	_T(ph)SSAELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S221	-0.662	-0.500	_TSS(ph)AELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S225	-0.970	-0.919	_TSSAELSTS(ph)APDEPLLSPVSPGFEQK_
PRKD1	Phosphorylation	S236		-0.132	_TSSAELSTSAPDEPLLSPVS(ph)PGFEQK_
PRKD1	Phosphorylation	S251	0.474	0.751	_SNS(ph)QSYIGRPIHLDK_
PRKD1	Phosphorylation	S399	0.023	0.162	_TIS(ph)PSTSNNIPLMR_
PRKD1	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD1	Phosphorylation	S744	-0.226	-0.287	_S(ph)VVGTPAYLAPEVLR_
PRKD2	Phosphorylation	S197	0.239	0.895	_RLS(ph)STSLASGHSVR_
PRKD2	Phosphorylation	T211		-0.119	_LGT(ph)SESLPCTAEELSR_
PRKD2	Phosphorylation	S212		0.113	_LGTS(ph)ESLPCTAEELSR_
PRKD2	Phosphorylation	S214	0.216	0.302	_LGTSES(ph)LPCTAEELSR_
PRKD2	Phosphorylation	S710	-0.413	-0.511	_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Phosphorylation	T714	-0.279		_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD2	Phosphorylation	S886	-0.718	-0.305	_DLGGACPPQDHDMQGLAERIS(ph)VL_
PROX1	Phosphorylation	S511	0.460	0.502	_DRAS(ph)PESLDLTR_
RICTOR	Phosphorylation	S21	-0.279	0.249	_NDS(ph)GEENVPLDLTR_
RICTOR	Ubiquitylation	K830	-0.874		_GYVAKQLEK(gl)_
RICTOR	Phosphorylation	S1284	2.625		_SNS(ph)VSLVPPGSSHTLPR_
RICTOR	Phosphorylation	S1302	-0.560	0.260	_RAQS(ph)LKAPSIATIK_
RICTOR	Phosphorylation	S1388	0.507		_ALSYAS(ph)LDKEDLLSPINQNTLQR_
RPTOR	Phosphorylation	S722	0.393	1.196	_SVSS(ph)YGNIR_
RPTOR	Phosphorylation	T857	-0.348		_VLDTSSLT(ph)QSAPAS(ph)PTNK_
RPTOR	Phosphorylation	S859	-0.462	-0.346	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S863	-0.208	-0.001	_VLDTSSLTQS(ph)APAS(ph)PTNK_
RPTOR	Phosphorylation	T865		-0.317	_VLDTSSLTQS(ph)APASPT(ph)NK_
RPTOR	Phosphorylation	S877	-0.114	-0.074	_GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK_
RPTOR	Ubiquitylation	K1008		-0.329	_QAQQVIQK(gl)GITR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_