RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
AARS	2	-0.590	1.990					1.091
AARS	2	-0.590	1.990	0.992
NSUN2	1	-0.630	0.380		0.495	-0.365
NSUN2	1	-0.630	0.380	-0.793			-0.402	-0.165
AARS2	1	0.260	-0.340	0.033	0.625	-0.534	1.513	0.383
YARS	1	-1.260	1.210	0.269			0.624	0.254
EIF2A	1	-0.180	-0.460	-0.199			-1.243	-0.618
SLFN11	1	-0.900	1.580	-0.299	1.243	0.811	1.780	0.466
RPL35A	1	-0.780	1.110	0.497			0.077	-0.240
METTL1	0	1.200	-0.840
KARS	0	-1.130	1.650	0.084	-0.672	-0.378	0.796	0.367
TRMT11	0	-0.350	0.360
TRMU	0	-0.860	0.730
EARS2	0			-0.906	0.314	-1.304	-0.291	0.677
TRMT1	0	-0.640	0.800				-1.192
TRMT1	0	-0.640	0.800	-0.296
PTCD1	0	-0.010	0.490	0.429	-0.169	-0.273	-0.094	-0.322
CARS	0	-0.880	0.880	0.696			-0.132	-0.166
RARS	0	1.460	-0.970	-0.057	0.442	0.324	0.293	0.530
DARS2	0	-1.040	1.580	0.858	0.635	-1.143	0.739	0.582
TRMT1L	0	1.210	-0.540		-1.420	-0.095		-1.436
XPO5	0	-0.730	0.620				-0.115	-0.423
XPO5	0	-0.730	0.620	-1.249
EEFSEC	0	1.890	-1.240	-1.222			0.489	0.126
SSB	0	-0.280	0.190			-2.187	-0.343	0.023
YARS2	0	-1.060	1.490		0.747	-0.546	0.181	-0.098
TYW5	0	-0.610	0.270
AIMP1	0	-0.220	0.620	-0.699			-0.552	-0.431
MARS	0	0.810	-1.040	-0.620	0.302	-0.071	0.469	0.367
CTU2	0	-0.680	0.850
FARSA	0	-0.010	-0.520	-0.323			-0.799	0.416
XPOT	0	-0.030	0.000	0.028			-0.168	0.337
ATP5J2-PTC	0			0.429	-0.169	-0.273	-0.094	-0.322

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AARS	Ubiquitylation	K338		0.835	_YAHEK(gl)LNASR_
AARS	Phosphorylation	S563	0.468	0.212	_VDDSS(ph)EDKTEFTVK_
AARS	Ubiquitylation	K625	-0.494	-0.399	_SVLGEADQK(gl)GSLVAPDR_
AARS	Ubiquitylation	K650	0.052	0.332	_GAMSTQQIK(gl)K_
AARS	Ubiquitylation	K677		0.025	_AVYTQDCPLAAAK(gl)AIQGLR_
AARS	Ubiquitylation	K762	-0.271	0.079	_IVAVTGAEAQK(gl)ALR_
AARS	Ubiquitylation	K820	2.550	4.438	_DELRETLK(gl)SLK_
AIMP1	Ubiquitylation	K9	-0.014	0.834	_MANNDAVLK(gl)R_
AIMP1	Ubiquitylation	K35	-1.334		_EK(gl)AILQATLR_
AIMP1	Ubiquitylation	K47	0.454	0.365	_AILQATLREEKK(gl)_
AIMP1	Ubiquitylation	K312	0.335	0.619	_AQTMSNSGIK(gl)_
CTU2	Phosphorylation	S490	-0.609	0.074	_LSQMQS(ph)PIPLTETR_
DARS2	Ubiquitylation	K153		-1.470	_TAELLNACK(gl)K_
DARS2	Ubiquitylation	K154		-1.470	_TAELLNACK(gl)K_
DARS2	Ubiquitylation	K196		-1.153	_SQMVMK(gl)MR_
DARS2	Ubiquitylation	K454		-0.701	_ACSLLGK(gl)LR_
DARS2	Ubiquitylation	K606		-2.184	_DVIAFPK(gl)SFR_
EEFSEC	Ubiquitylation	K38	-0.599	-0.349	_ALSTTASTAAFDK(gl)QPQSR_
EIF2A	Ubiquitylation	K40		7.150	_NCK(gl)VCIFSK_
EIF2A	Phosphorylation	S503	-0.843	-0.645	_S(ph)DKSPDLAPTPAPQSTPR_
EIF2A	Phosphorylation	S506	-0.882	-0.939	_SDKS(ph)PDLAPTPAPQSTPR_
FARSA	Ubiquitylation	K101		-1.628	_LPSGK(gl)VGFSK_
FARSA	Ubiquitylation	K106		-1.106	_VGFSK(gl)AMSNK_
FARSA	Ubiquitylation	K111		-0.315	_AMSNK(gl)WIR_
FARSA	Ubiquitylation	K150	-0.153	-1.859	_GGQAEK(gl)LGEKER_
FARSA	Ubiquitylation	K187		-1.195	_GSAFSTSISK(gl)QETELSPEMISSGSWR_
FARSA	Phosphorylation	S301		0.429	_THS(ph)QGGYGSQGYK_
FARSA	Ubiquitylation	K311		-1.006	_THSQGGYGSQGYK(gl)YNWK_
FARSA	Ubiquitylation	K315		-0.353	_YNWK(gl)LDEAR_
FARSA	Ubiquitylation	K342		-1.788	_LAQK(gl)KPFTPVK_
MARS	Ubiquitylation	K109		1.248	_K(gl)GEDVLGSVR_
MARS	Ubiquitylation	K375	1.017		_ITQDIFQQLLK(gl)R_
MARS	Phosphorylation	T824	-0.049	0.199	_T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK_
MARS	Phosphorylation	S825	-0.049	0.219	_TS(ph)PKPAVVETVTTAK_
METTL1	Phosphorylation	S27	0.690	0.333	_AHS(ph)NPMADHTLR_
METTL1	Ubiquitylation	K250	-0.712	-0.379	_NGGK(gl)NFPAIFR_
NSUN2	Ubiquitylation	K95		0.374	_EILHCLK(gl)NK_
NSUN2	Ubiquitylation	K229	1.125		_CYLLVHQAK(gl)R_
NSUN2	Ubiquitylation	K286	0.469	-0.479	_NIDVWKK(gl)_
NSUN2	Ubiquitylation	K437		-0.886	_SSMPWNK(gl)R_
NSUN2	Phosphorylation	T453	0.154	0.148	_EST(ph)QLSPADLTEGKPTDPSK_
NSUN2	Phosphorylation	S456	0.187	0.131	_ESTQLS(ph)PADLTEGKPTDPSK_
NSUN2	Ubiquitylation	K565		1.464	_QLYMVSK(gl)ELR_
NSUN2	Ubiquitylation	K577	0.039		_NVLLNNSEK(gl)MK_
NSUN2	Ubiquitylation	K579	1.054	-0.390	_MK(gl)VINTGIK_
NSUN2	Phosphorylation	S593	1.207	1.722	_NNS(ph)GEEFDCAFR_
NSUN2	Ubiquitylation	K640	0.276	-0.635	_K(gl)LSSETYSQAK_
NSUN2	Ubiquitylation	K650	0.357	-0.742	_KLSSETYSQAK(gl)DLAK_
NSUN2	Ubiquitylation	K654	0.538	-0.353	_DLAK(gl)GSIVLK_
NSUN2	Phosphorylation	S743	-1.676	-1.545	_AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR_
NSUN2	Phosphorylation	S751	-0.991	-1.534	_AGEPNSPDAEEANS(ph)PDVTAGCDPAGVHPPR_
RARS	Ubiquitylation	K20	0.056		_LLQQEEEIK(gl)SLTAEIDR_
RARS	Ubiquitylation	K306		-0.732	_NPDITK(gl)AWK_
RARS	Ubiquitylation	K393	-0.263	-0.569	_SDGGYTYDTSDLAAIK(gl)QR_
RARS	Ubiquitylation	K557		0.576	_LANIDEEMLQK(gl)AAR_
RPL35A	Ubiquitylation	K15		1.064	_AIFAGYK(gl)R_
RPL35A	Ubiquitylation	K45	0.279	1.111	_DETEFYLGK(gl)R_
RPL35A	Ubiquitylation	K54	1.472	1.347	_AK(gl)NNTVTPGGK(gl)PNK_
RPL35A	Ubiquitylation	K63	1.472	1.347	_AK(gl)NNTVTPGGK(gl)PNK_
RPL35A	Ubiquitylation	K66	0.586	0.165	_NNTVTPGGKPNK(gl)TR_
RPL35A	Ubiquitylation	K73		1.181	_VIWGK(gl)VTR_
RPL35A	Ubiquitylation	K95	1.550	1.407	_SNLPAK(gl)AIGHR_
SLFN11	Ubiquitylation	K262		-0.153	_EVLGCAK(gl)ENVDPDSLRR_
SLFN11	Ubiquitylation	K273	0.647		_K(gl)IEQAIYK_
SLFN11	Ubiquitylation	K495		0.320	_TAFTLK(gl)QK_
SLFN11	Ubiquitylation	K497		0.637	_QK(gl)LVNMGGYTGK_
SLFN11	Ubiquitylation	K507		0.547	_LVNMGGYTGK(gl)VCVR_
SLFN11	Ubiquitylation	K683		-0.234	_TEDGDWYGK(gl)AK_
SLFN11	Ubiquitylation	K685		-0.163	_TEDGDWYGK(gl)AK_
SLFN11	Ubiquitylation	K739		-0.755	_NADPIAK(gl)YLQK_
SLFN11	Ubiquitylation	K743	0.098	-0.176	_YLQK(gl)EMQVIR_
SLFN11	Ubiquitylation	K823		-0.342	_EVEHYK(gl)YELLK_
SSB	Ubiquitylation	K9	0.171		_(ac)AENGDNEK(gl)MAALEAK_
SSB	Ubiquitylation	K37	0.184		_DKFLK(gl)EQIK_
SSB	Ubiquitylation	K76	0.247		_SK(gl)AELMEISEDKTK_
SSB	Ubiquitylation	K88	-0.144		_AELMEISEDKTK(gl)IR_
SSB	Phosphorylation	S92	-0.549	-0.960	_S(ph)PSKPLPEVTDEYK_
SSB	Phosphorylation	S94	-0.455	-0.863	_SPS(ph)KPLPEVTDEYKNDVK_
SSB	Ubiquitylation	K166	0.281		_K(gl)FVETPGQK_
SSB	Ubiquitylation	K191	0.063		_DDYFAK(gl)K_
SSB	Ubiquitylation	K224	-0.359		_QKLEEDAEMK(gl)SLEEK_
SSB	Ubiquitylation	K269	-0.371		_GAK(gl)EGIILFK_
SSB	Ubiquitylation	K276	0.992	0.682	_EGIILFK(gl)EK_
SSB	Ubiquitylation	K278		0.682	_EGIILFK(gl)EK_
SSB	Ubiquitylation	K287	0.046	1.014	_AK(gl)DANNGNLQLR_
SSB	Ubiquitylation	K328	0.436	0.707	_IIEDQQESLNK(gl)WK_
SSB	Ubiquitylation	K361	0.065		_GKVQFQGKK(gl)_
SSB	Phosphorylation	S366	0.043	0.146	_FAS(ph)DDEHDEHDENGATGPVKR_
TRMT1	Ubiquitylation	K283	0.868	0.731	_YGAMALK(gl)SR_
TRMT1	Ubiquitylation	K483	-0.399		_VSLSHACK(gl)NAVK_
TRMT1	Phosphorylation	S623	-0.536		_GDQCCYS(ph)HSPPTPR_
TRMT1	Phosphorylation	S625	-0.651	-0.411	_GDQCCYSHS(ph)PPTPR_
TRMT11	Ubiquitylation	K189		-1.145	_ELIESYSVK(gl)K_
TRMT11	Ubiquitylation	K190		-1.145	_ELIESYSVK(gl)K_
TRMT1L	Phosphorylation	S66	-3.763		_DSAGVPAPAPDSALDSAPTPASAPAPAPALAQAPALS(ph)PSLASAPEEAK_
TRMU	Ubiquitylation	K395		-1.764	_LGPSAYTLQK(gl)GQR_
TYW5	Ubiquitylation	K191	0.329		_DAQYLYLK(gl)GTK_
XPO5	Ubiquitylation	K41	0.335	0.432	_FCEEFK(gl)EK_
XPO5	Ubiquitylation	K208		0.222	_YQQVK(gl)TDTSQESK_
XPO5	Ubiquitylation	K413	-0.446	-1.260	_MGFPSK(gl)TDSPSCEYSR_
XPO5	Ubiquitylation	K590		0.136	_LFSSVTFETVEESK(gl)APR_
XPO5	Ubiquitylation	K610	1.403	-0.701	_HACSSIIK(gl)M(ox)CR_
XPO5	Ubiquitylation	K930		0.307	_LSQK(gl)WQVINQR_
XPO5	Ubiquitylation	K981	0.854		_EVMDLITVCCVSKK(gl)_
XPO5	Ubiquitylation	K1181	-0.022		_NLPSLFKK(gl)_
XPOT	Ubiquitylation	K172	0.617	0.802	_NTLIK(gl)DTMR_
XPOT	Ubiquitylation	K629	0.877		_FK(gl)ILLEK_
YARS	Ubiquitylation	K10	0.602	0.107	_(ac)GDAPSPEEK(gl)LHLITR_
YARS	Ubiquitylation	K32	1.046		_LKEILK(gl)ER_
YARS	Ubiquitylation	K127	0.207	2.263	_GTDYQLSK(gl)EYTLDVYR_
YARS	Ubiquitylation	K206		-0.015	_YLPALGYSK(gl)R_
YARS	Ubiquitylation	K335	-0.488		_K(gl)LASAAYPDPSK_
YARS	Ubiquitylation	K356	-0.587		_GPAK(gl)NSEPEEVIPSR_
YARS	Ubiquitylation	K380	0.526		_IITVEK(gl)HPDADSLYVEK_
YARS	Ubiquitylation	K513	0.184	0.210	_QTNFMTK(gl)LGSISCK_