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KEGG_BASE_EXCISION_REPAIR
(Pathway_334)

RNAi screen result RNAPII IP (MG132) CSB IP CSB IP (MG132) Chrom. Chrom. (MG132) Ubi /Phospo Ubi /Phospho (MG132)
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Protein Results:

Results for post-translational modifications (below)
Gene name MGoogle Score RNAi high RNAi low RNAPII-IP (MG132) CSB-IP CSB-IP (MG132) Chrom. Chrom. (MG132)
PCNA 2 -0.730 0.380 0.679 1.154 0.572 0.718 0.782
PARP1 2
PARP1 2 -0.200 0.357 0.412 0.442 0.293
HMGB1 2 -1.590 3.400 2.856 -1.899 0.030 -0.792
LIG3 1 -0.380 2.090 -0.284 0.336 0.549 0.370
POLE2 1 2.560 -1.150
NEIL3 1 2.830 -1.410
TDG 1 1.400 -0.150
POLD1 0 1.600 -1.300 -0.932 0.362 0.283
POLD1 0 1.600 -1.300
NTHL1 0 0.810 -0.080 1.191 1.167
XRCC1 0 -0.010 0.060 -0.364 -0.736 -0.059 0.224 0.061
UNG 0 -0.560 0.900
POLD3 0 -0.343
APEX1 0 0.630 -0.180 -0.057 -0.077
MPG 0 0.710 -0.165 0.525
LIG1 0 0.370 -0.580
POLD2 0 -0.020 0.200 0.123
OGG1 0 -0.290 1.020
PARP2 0 -0.150 -0.170 -0.627 -0.236
POLE3 0 -0.830 0.170 -0.901 -0.263
FEN1 0 -1.360 2.210 0.895 1.036 -1.389 -0.361 -0.414
APEX2 0 -0.680 0.420
POLE 0 -0.404 0.128 -0.376 -0.212
POLE 0 -0.273

PTM Sites:

Back to Protein Results
Gene name PTM type PTM site UV UV (MG132) Sequence
APEX1 Ubiquitylation K25 -0.227 _GAVAEDGDELRTEPEAKK(gl)_
APEX1 Ubiquitylation K58 -0.215 _TSPSGK(gl)PATLK_
APEX2 Ubiquitylation K371 0.281 -0.420 _VQTCQNK(gl)AQVR_
APEX2 Ubiquitylation K482 -0.126 _TVK(gl)KPGPNLGR_
FEN1 Ubiquitylation K354 1.109 _VTGSLSSAK(gl)R_
HMGB1 Ubiquitylation K50 0.651 _WK(gl)TMSAK_
HMGB1 Ubiquitylation K59 1.001 0.009 _GK(gl)FEDMAK_
HMGB1 Ubiquitylation K114 0.314 _IK(gl)GEHPGLSIGDVAK_
HMGB1 Ubiquitylation K127 0.018 _IKGEHPGLSIGDVAK(gl)K_
HMGB1 Ubiquitylation K128 -0.407 _K(gl)LGEMWNNTAADDKQPYEK_
HMGB1 Ubiquitylation K157 0.850 _YEK(gl)DIAAYR_
LIG1 Phosphorylation S49 0.101 _EWNGVVSES(ph)DSPVK_
LIG1 Phosphorylation S51 0.145 -0.066 _EWNGVVSESDS(ph)PVK_
LIG1 Phosphorylation S66 0.671 0.408 _VLGS(ph)EGEEEDEALSPAK_
LIG1 Phosphorylation S76 -0.083 0.108 _VLGSEGEEEDEALS(ph)PAK_
LIG1 Phosphorylation S88 1.273 _GQKPALDCS(ph)QVSPPRPATSPENNASLSDTSPMDSSPSGIPK_
LIG1 Phosphorylation S141 0.697 0.877 _TIQEVLEEQS(ph)EDEDREAK_
LIG1 Phosphorylation T182 -0.768 -0.709 _EGEDGDQPT(ph)TPPKPLK_
LIG1 Phosphorylation T183 -0.923 -0.825 _EGEDGDQPTT(ph)PPKPLK_
LIG1 Phosphorylation T195 0.021 0.224 _AET(ph)PTESVS(ph)EPEVATK_
LIG1 Phosphorylation T197 0.441 0.125 _AETPT(ph)ESVSEPEVATK_
LIG1 Phosphorylation S199 0.721 _AET(ph)PTES(ph)VSEPEVATK_
LIG1 Phosphorylation S201 -0.213 0.070 _AET(ph)PTESVS(ph)EPEVATK_
LIG3 Phosphorylation T209 -0.306 -0.552 _LTTTGQVT(ph)SPVK_
LIG3 Phosphorylation S210 -0.163 0.011 _LTTTGQVTS(ph)PVK_
LIG3 Phosphorylation S241 -0.868 -0.902 _PNNSGEAPS(ph)SPTPK_
LIG3 Phosphorylation S242 -0.782 -0.612 _FSGFSAKPNNSGEAPSS(ph)PTPK_
LIG3 Ubiquitylation K728 0.493 0.853 _WCTVTK(gl)CAGGHDDATLAR_
LIG3 Ubiquitylation K833 1.857 0.467 _ELYQLSK(gl)EK_
MPG Ubiquitylation K80 0.035 _SIYFSSPK(gl)GHLTR_
MPG Ubiquitylation K210 -0.782 _VLK(gl)DRELCSGPSK_
NEIL3 Ubiquitylation K13 -1.903 _VEGPGCTLNGEK(gl)IR_
NEIL3 Ubiquitylation K291 -0.197 _ENPQHVDICK(gl)LPTR_
OGG1 Ubiquitylation K289 -2.026 _DYSWHPTTSQAK(gl)GPSPQTNK_
PARP1 Phosphorylation S41 -0.803 _MAIMVQS(ph)PMFDGK_
PARP1 Ubiquitylation K84 1.223 _WDDQQK(gl)VK_
PARP1 Ubiquitylation K86 1.058 _VK(gl)KTAEAGGVTGK_
PARP1 Ubiquitylation K87 1.058 _VK(gl)KTAEAGGVTGK_
PARP1 Ubiquitylation K97 1.386 0.406 _TAEAGGVTGK(gl)GQDGIGSK_
PARP1 Ubiquitylation K105 0.828 _GQDGIGSK(gl)AEK_
PARP1 Ubiquitylation K108 1.317 _GQDGIGSKAEK(gl)_
PARP1 Ubiquitylation K119 1.569 _TLGDFAAEYAK(gl)SNR_
PARP1 Ubiquitylation K131 1.025 1.620 _GCMEK(gl)IEK_
PARP1 Ubiquitylation K197 0.445 1.157 _K(gl)QLPGVK_
PARP1 Ubiquitylation K254 0.589 _AQNDLIWNIKDELKK(gl)_
PARP1 Ubiquitylation K262 0.456 _VCSTNDLK(gl)ELLIFNK_
PARP1 Ubiquitylation K320 1.464 1.034 _SDAYYCTGDVTAWTK(gl)CMVK_
PARP1 Ubiquitylation K331 -0.425 -0.480 _TQTPNRK(gl)EWVTPK_
PARP1 Ubiquitylation K337 0.462 0.332 _EWVTPK(gl)EFR_
PARP1 Ubiquitylation K346 0.370 0.411 _EISYLK(gl)K_
PARP1 Phosphorylation T368 -1.474 -1.410 _IFPPETSASVAAT(ph)PPPSTASAPAAVNSSASADKPLSNM(ox)K_
PARP1 Ubiquitylation K400 0.844 1.095 _ILTLGK(gl)LSR_
PARP1 Ubiquitylation K414 1.227 1.241 _AMIEK(gl)LGGK_
PARP1 Ubiquitylation K418 1.131 _LGGK(gl)LTGTANK_
PARP1 Ubiquitylation K425 0.912 0.815 _LTGTANK(gl)ASLCISTKK_
PARP1 Ubiquitylation K433 0.942 _ASLCISTK(gl)K_
PARP1 Ubiquitylation K434 0.020 _ASLCISTKK(gl)_
PARP1 Ubiquitylation K447 1.480 _MEEVK(gl)EANIR_
PARP1 Ubiquitylation K518 0.108 _GQVKEEGINK(gl)SEK_
PARP1 Ubiquitylation K521 0.630 _GQVKEEGINKSEK(gl)R_
PARP1 Ubiquitylation K548 0.125 -0.480 _GGAAVDPDSGLEHSAHVLEK(gl)GGK_
PARP1 Ubiquitylation K551 0.492 -0.573 _GGAAVDPDSGLEHSAHVLEKGGK(gl)_
PARP1 Ubiquitylation K629 1.632 _TGNAWHSK(gl)NFTK_
PARP1 Ubiquitylation K633 0.964 0.091 _NFTK(gl)YPK_
PARP1 Ubiquitylation K654 -0.086 _K(gl)LTVNPGTK_
PARP1 Ubiquitylation K662 0.112 _LTVNPGTK(gl)SK_
PARP1 Ubiquitylation K664 -0.042 -0.111 _LTVNPGTKSK(gl)_
PARP1 Ubiquitylation K683 0.983 1.355 _MIFDVESM(ox)K(gl)K_
PARP1 Ubiquitylation K684 1.213 1.355 _MIFDVESMKK(gl)_
PARP1 Ubiquitylation K700 0.448 _MPLGK(gl)LSK_
PARP1 Phosphorylation S782 0.648 0.490 _GGS(ph)DDSSKDPIDVNYEK_
PARP1 Ubiquitylation K949 0.738 _HSVK(gl)GLGK_
PARP2 Phosphorylation S33 -0.845 -1.957 _RVNNGNTAPEDS(ph)SPAK_
PARP2 Phosphorylation S34 -1.168 -1.957 _RVNNGNTAPEDSS(ph)PAK_
PARP2 Ubiquitylation K91 0.459 _GK(gl)APVDPECTAK_
PCNA Ubiquitylation K13 0.209 2.207 _LVQGSILK(gl)K_
PCNA Ubiquitylation K14 0.233 2.833 _LVQGSILKK(gl)_
PCNA Ubiquitylation K80 0.570 1.579 _ILK(gl)CAGNEDIITLR_
PCNA Ubiquitylation K164 2.309 2.671 _DLSHIGDAVVISCAK(gl)DGVK_
PCNA Ubiquitylation K168 2.484 2.645 _DLSHIGDAVVISCAKDGVK(gl)_
PCNA Ubiquitylation K248 0.226 0.515 _IADMGHLK(gl)YYLAPK_
POLD1 Ubiquitylation K414 -1.315 _AQTLK(gl)VQTFPFLGR_
POLD1 Ubiquitylation K439 -1.108 _DSSFQSK(gl)QTGRR_
POLD1 Ubiquitylation K447 -1.286 _DTK(gl)VVSMVGR_
POLD1 Ubiquitylation K554 -0.798 _GQQVK(gl)VVSQLLR_
POLD1 Ubiquitylation K674 -1.082 -1.843 _TPTGDEFVK(gl)TSVR_
POLD1 Ubiquitylation K758 -0.638 _TK(gl)QLVESK_
POLD1 Ubiquitylation K853 -0.080 -1.776 _MDCK(gl)GLEAVR_
POLD1 Ubiquitylation K911 -0.089 -0.915 _IDISQLVITK(gl)ELTR_
POLD1 Ubiquitylation K923 -2.496 _AASDYAGK(gl)QAHVELAER_
POLD1 Ubiquitylation K1033 0.475 -0.930 _VGGLLAFAK(gl)R_
POLD1 Ubiquitylation K1065 -0.208 _ESELYQK(gl)EVSHLNALEER_
POLD2 Phosphorylation S15 -1.104 _AHTLLS(ph)PPSANNATFAR_
POLD2 Ubiquitylation K81 -0.936 _AQQHWGSGVGVKK(gl)_
POLD2 Ubiquitylation K145 0.215 _LK(gl)GTIDVSK_
POLD2 Ubiquitylation K267 -0.443 -0.428 _K(gl)TQAASVEAVK_
POLD3 Phosphorylation S307 0.831 0.828 _VALS(ph)DDETKETENMR_
POLE Ubiquitylation K187 -0.801 _EISPAVKK(gl)_
POLE Ubiquitylation K436 -0.163 _DSYLPVGSHNLK(gl)AAAK_
POLE Ubiquitylation K1061 -1.582 _KLEDYGEQK(gl)STSISTAK_
POLE Ubiquitylation K1081 -1.440 _LAEFLGDQMVK(gl)DAGLSCR_
POLE Ubiquitylation K1385 -1.054 -0.957 _VAK(gl)AEEGASYR_
POLE Ubiquitylation K1573 -0.910 _AETDLK(gl)TICR_
POLE Ubiquitylation K1587 -0.722 _FLLAYK(gl)EER_
POLE Ubiquitylation K2121 0.432 _YVCK(gl)VLSLDTNITNQVNK_
POLE Ubiquitylation K2135 -0.740 -1.214 _VLSLDTNITNQVNK(gl)LNR_
POLE2 Ubiquitylation K15 0.263 -0.418 _ALSAFK(gl)LR_
POLE2 Ubiquitylation K339 -0.257 _NQVQALK(gl)DSLK_
POLE2 Ubiquitylation K523 -1.031 _TVEDSK(gl)LQGF_
POLE3 Ubiquitylation K31 -0.408 -0.365 _EALPDGVNISK(gl)EAR_
TDG Ubiquitylation K103 0.728 _ITDTFK(gl)VKR_
TDG Ubiquitylation K105 1.500 _ITDTFKVK(gl)_
TDG Ubiquitylation K201 -0.531 0.797 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K206 0.334 1.024 _TTPGSK(gl)DLSSK(gl)EFR_
TDG Ubiquitylation K218 1.203 _ILVQK(gl)LQK_
TDG Ubiquitylation K221 1.524 _LQK(gl)YQPR_
TDG Ubiquitylation K246 0.699 1.949 _EVFGVK(gl)VK_
TDG Ubiquitylation K285 1.047 _AQDK(gl)VHYYIK_
TDG Ubiquitylation K293 1.411 _LK(gl)DLRDQLK_
TDG Ubiquitylation K300 0.980 _DQLK(gl)GIER_
UNG Phosphorylation S23 -1.142 -1.073 _RHAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK_
UNG Phosphorylation T60 -1.290 -1.060 _KAPAGQEEPGT(ph)PPSSPLSAEQLDR_
UNG Phosphorylation S63 -0.773 _KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR_
UNG Phosphorylation S64 -0.503 -0.621 _KAPAGQEEPGT(ph)PPSS(ph)PLSAEQLDR_
UNG Ubiquitylation K78 -0.165 1.121 _NK(gl)AAALLR_
UNG Ubiquitylation K100 -0.387 _NVPVGFGESWKK(gl)_
UNG Ubiquitylation K302 -0.513 _TNELLQK(gl)SGK_
XRCC1 Ubiquitylation K143 0.287 0.218 _VK(gl)IVCSQPYSK_
XRCC1 Ubiquitylation K183 0.349 _VTVTK(gl)LGQFR_
XRCC1 Phosphorylation S240 -1.676 _TSPVTASDPAGPSYAAATLQASSAASSAS(ph)PVSR_
XRCC1 Phosphorylation T249 -0.792 -0.550 _AIGST(ph)SKPQESPKGK_
XRCC1 Phosphorylation S255 -1.174 -0.626 _AIGSTSKPQES(ph)PK_
XRCC1 Phosphorylation S280 0.316 0.913 _KTPSKPPAQLS(ph)PSVPK_
XRCC1 Phosphorylation S282 0.731 _KTPSKPPAQLS(ph)PSVPK_
XRCC1 Ubiquitylation K355 0.580 _DK(gl)ALELGAK_
XRCC1 Phosphorylation S460 -1.302 -0.863 _TKPTQAAGPS(ph)SPQKPPT(ph)PEETK_
XRCC1 Phosphorylation S461 -2.007 -4.025 _TKPTQAAGPSS(ph)PQKPPTPEETK_
XRCC1 Phosphorylation T467 -1.175 -1.061 _TKPTQAAGPSS(ph)PQKPPT(ph)PEETK_
XRCC1 Phosphorylation T471 -1.661 _TKPTQAAGPSS(ph)PQKPPT(ph)PEETK_
XRCC1 Phosphorylation S475 -0.043 0.033 _AAS(ph)PVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRR_


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