RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GSK3B	2	1.020	-0.870				-1.128	1.091
PHIP	2	0.650	-0.230				0.434	0.305
RIPK2	1	-1.740	3.580
RAF1	1	2.020	-1.230
CD44	0	0.270	-0.230
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
ARAF	0	0.550	-0.670
ARAF	0	0.550	-0.670
PRKD2	0	0.050	0.170	0.914
PRKD2	0	0.050	0.170
TGFB1	0	-0.550	1.050
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
CAV1	0	1.150	-0.150
WNT5A	0
DOCK7	0	-0.180	1.240	-1.046			0.305	0.146
MAD2L2	0	-0.960	1.170
PIK3CA	0
LATS1	0	0.520	-0.880
ARRB1	0	0.960	-0.620
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
HAX1	0	0.350	-0.770	-0.053			-0.086	-0.378
PAK1	0	1.190	-0.630
BRAF	0
BCL2	0	0.910	-0.740
GAS6	0	0.020	0.220		-1.517	-0.502
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
PRKD1	0	1.050	0.130
FNIP1	0
FNIP1	0
MIF	0	1.480	-0.910		-0.887	-0.872	-1.709	0.653

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
ARAF	Phosphorylation	T227		0.017	_STSTPNVHMVSTT(ph)APMDSNLIQLTGQSFSTDAAGSR_
ARAF	Phosphorylation	S260	0.245		_GS(ph)PSPASVSSGR_
ARAF	Ubiquitylation	K543	-1.068	-0.962	_ISSNCPK(gl)AMR_
ARAF	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
ARRB1	Phosphorylation	S412	0.138	0.253	_GMKDDKEEEEDGTGS(ph)PQLNNR_
BCL2	Ubiquitylation	K22	1.480		_YIHYK(gl)LSQR_
BRAF	Phosphorylation	S151	-0.685	-0.629	_SNPKS(ph)PQKPIVR_
BRAF	Phosphorylation	S363	-0.023	-0.241	_S(ph)SSAPNVHINTIEPVNIDDLIR_
BRAF	Phosphorylation	S365	-0.286	0.012	_SSS(ph)APNVHINTIEPVNIDDLIR_
BRAF	Phosphorylation	S399	-0.890	-0.527	_GDGGSTTGLS(ph)ATPPASLPGSLTNVK_
BRAF	Phosphorylation	T401	-0.525		_GDGGSTTGLSAT(ph)PPASLPGSLTNVK_
BRAF	Phosphorylation	S446	0.246	0.349	_RDS(ph)SDDWEIPDGQITVGQR_
BRAF	Phosphorylation	S447	0.579	0.623	_RDSS(ph)DDWEIPDGQITVGQR_
BRAF	Phosphorylation	S729	0.208	0.219	_SAS(ph)EPSLNR_
CAV1	Ubiquitylation	K5	0.591	0.963	_(ac)SGGK(gl)YVDSEGHLYTVPIR_
CAV1	Phosphorylation	S6	0.836	0.688	_(ac)ADELS(ph)EKQVYDAHTK_
CAV1	Ubiquitylation	K8	0.244	0.734	_(ac)ADELSEK(gl)QVYDAHTK_
CAV1	Ubiquitylation	K26	0.724	0.894	_EQGNIYK(gl)PNNK_
CAV1	Ubiquitylation	K30	-0.008	0.317	_EQGNIYKPNNK(gl)AMADELSEK_
CAV1	Ubiquitylation	K39	0.690	1.170	_AMADELSEK(gl)QVYDAHTK_
CAV1	Phosphorylation	S76	0.607	0.527	_AMADELS(ph)EK_
CAV1	Ubiquitylation	K176		-0.259	_INLQK(gl)EI_
CD44	Ubiquitylation	K739	-0.024	0.134	_NLQNVDMK(gl)IGV_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
DOCK7	Phosphorylation	S180	0.319	0.371	_S(ph)MSIDDTPR_
DOCK7	Ubiquitylation	K381		0.138	_LK(gl)SQADQFCQR_
DOCK7	Phosphorylation	S452	1.041	1.249	_TTS(ph)GDDACNLTSFR_
DOCK7	Phosphorylation	S888	0.502	0.610	_SAVRPAS(ph)LNLNR_
DOCK7	Phosphorylation	S896		-0.852	_S(ph)LSNSNPDISGTPTSPDDEVR_
DOCK7	Phosphorylation	S898	-2.241	-0.434	_SLS(ph)NSNPDISGTPTSPDDEVR_
DOCK7	Phosphorylation	S900	-0.947	-3.303	_SLSNS(ph)NPDISGT(ph)PTSPDDEVR_
DOCK7	Phosphorylation	T907	-0.613	-0.434	_SLS(ph)NSNPDISGT(ph)PTSPDDEVR_
DOCK7	Phosphorylation	S910	-0.268	-0.548	_SLS(ph)NSNPDISGTPTS(ph)PDDEVR_
DOCK7	Phosphorylation	S929	0.481	0.241	_SNS(ph)WVNTGGPK_
DOCK7	Phosphorylation	S946		0.288	_AAPWGSNPS(ph)PSAESTQAMDR_
DOCK7	Phosphorylation	S1383	1.049	1.056	_MNS(ph)LTFK_
DOCK7	Phosphorylation	S1432	0.204	0.208	_SPS(ph)GSAFGSQENLR_
DOCK7	Phosphorylation	S1438	-0.052	-0.235	_SPSGSAFGS(ph)QENLR_
DOCK7	Ubiquitylation	K2080	0.971		_NK(gl)SLIGPDQKEYQR_
DOCK7	Ubiquitylation	K2088	0.652		_SLIGPDQK(gl)EYQR_
DOCK7	Phosphorylation	S2129		0.410	_AVLPVTCHRDS(ph)FSR_
FNIP1	Ubiquitylation	K64		-1.360	_NVLFDSSVK(gl)R_
FNIP1	Ubiquitylation	K161		-0.401	_SPPQLMLSK(gl)VFTAR_
FNIP1	Phosphorylation	S280	-0.583	-0.664	_LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR_
FNIP1	Phosphorylation	S1120		0.074	_SLS(ph)QGSTNSNM(ox)LDVQGGAHKK_
FNIP1	Phosphorylation	S1144	1.135	0.460	_RSS(ph)LLNAK_
FNIP1	Phosphorylation	S1207	-1.222	-0.492	_SSEMS(ph)PVPMR_
FNIP1	Phosphorylation	S1544	-0.050	-0.196	_GLIVYCVTS(ph)PK_
GSK3B	Phosphorylation	S9	-0.483	0.010	_TTS(ph)FAESCKPVQQPSAFGSMK_
GSK3B	Ubiquitylation	K85		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Ubiquitylation	K86		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Phosphorylation	S215	0.296	0.477	_GEPNVS(ph)YICSR_
GSK3B	Phosphorylation	Y216	0.356	0.376	_GEPNVSY(ph)ICSR_
GSK3B	Phosphorylation	T390	2.800	2.527	_IQAAAST(ph)PTNATAASDANTGDR_
HAX1	Ubiquitylation	K131	-1.235	-0.518	_DSMLK(gl)YPDSHQPR_
HAX1	Ubiquitylation	K209	-0.627	0.782	_SYFK(gl)SISVTK_
LATS1	Phosphorylation	T246		-2.282	_SVT(ph)PPPPPR_
LATS1	Phosphorylation	T262		-1.011	_GTT(ph)PPPPSWEPNSQTK_
LATS1	Phosphorylation	S278	0.261	0.599	_RYS(ph)GNM(ox)EYVISR_
LATS1	Phosphorylation	S462	-0.408		_S(ph)NSFNNPLGNR_
LATS1	Phosphorylation	S464	0.077	-0.151	_SNS(ph)FNNPLGNR_
LATS1	Phosphorylation	S613	0.270	0.155	_KQITTS(ph)PITVR_
LATS1	Ubiquitylation	K688	0.392		_MLCQK(gl)ESNYIR_
MAD2L2	Ubiquitylation	K44		1.121	_EVYPVGIFQK(gl)R_
MIF	Ubiquitylation	K78	0.018	0.329	_SYSK(gl)LLCGLLAER_
PAK1	Phosphorylation	S174	-1.439	-0.597	_AVSETPAVPPVS(ph)EDEDDDDDDATPPPVIAPRPEHTK_
PAK1	Phosphorylation	T212		0.312	_SVIEPLPVT(ph)PTR_
PAK1	Phosphorylation	T219	-0.560	-0.962	_DVAT(ph)SPISPTENNTT(ph)PPDALTR_
PAK1	Phosphorylation	S220	-0.916	-0.774	_DVATS(ph)PISPTENNTTPPDALTR_
PAK1	Phosphorylation	S223	1.033	0.153	_DVATSPIS(ph)PTENNTTPPDALTR_
PAK1	Phosphorylation	T225	-1.278		_DVATSPISPT(ph)ENNTTPPDALTR_
PAK1	Phosphorylation	T230	-1.418	-1.502	_DVATSPISPTENNTT(ph)PPDALTR_
PHIP	Ubiquitylation	K6	1.214		_K(gl)GLSELR_
PHIP	Ubiquitylation	K65	0.460		_TYQNLVK(gl)YYR_
PHIP	Phosphorylation	S674	0.709	0.567	_LSRGS(ph)ISSTSEVHSPPNVGLR_
PHIP	Ubiquitylation	K767	0.459		_ENK(gl)IPTVSK_
PHIP	Phosphorylation	S911	0.029	-0.103	_VNEEKDGPIS(ph)PKK_
PHIP	Ubiquitylation	K1005	0.642		_EQELMK(gl)IVGIK_
PHIP	Ubiquitylation	K1032	-0.023		_LAFLDPDTGK(gl)LTGGSFTMK_
PHIP	Ubiquitylation	K1062	1.216	0.801	_QQFDDAK(gl)YRR_
PHIP	Phosphorylation	S1315	2.743	1.429	_AQS(ph)YDIQAWKK_
PHIP	Ubiquitylation	K1383	-0.669		_ETLEAGNYESPMELCK(gl)DVR_
PHIP	Phosphorylation	S1525		-0.688	_VVVDPVVTEQPSTSS(ph)AAK_
PHIP	Ubiquitylation	K1528	-0.207		_VVVDPVVTEQPSTSSAAK(gl)TFITK_
PHIP	Ubiquitylation	K1533	1.039		_TFITK(gl)ANASAIPGK_
PHIP	Phosphorylation	S1560	-0.176	0.420	_ALNTLSS(ph)PGQSSFSHGTR_
PHIP	Ubiquitylation	K1602	1.984		_ASTLSK(gl)SSAVIEQGDCK_
PHIP	Phosphorylation	S1651		-0.008	_VEVNTNS(ph)GEIIHK_
PHIP	Phosphorylation	S1783	0.754	0.729	_TAFYNEDDS(ph)EEEQR_
PHIP	Ubiquitylation	K1815	1.427	0.364	_AK(gl)ANLIGW_
PIK3CA	Ubiquitylation	K864	0.390	0.588	_NSHTIM(ox)QIQCK(gl)GGLK_
PIK3CA	Ubiquitylation	K868	0.204	0.651	_NSHTIM(ox)QIQCKGGLK(gl)_
PIK3CA	Ubiquitylation	K974	-0.273		_GAQECTK(gl)TREFER_
PRKD1	Phosphorylation	S207	0.941	1.048	_RLS(ph)NVSLTGVSTIR_
PRKD1	Phosphorylation	T219	-0.068	-0.162	_T(ph)SSAELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S221	-0.662	-0.500	_TSS(ph)AELSTSAPDEPLLQK_
PRKD1	Phosphorylation	S225	-0.970	-0.919	_TSSAELSTS(ph)APDEPLLSPVSPGFEQK_
PRKD1	Phosphorylation	S236		-0.132	_TSSAELSTSAPDEPLLSPVS(ph)PGFEQK_
PRKD1	Phosphorylation	S251	0.474	0.751	_SNS(ph)QSYIGRPIHLDK_
PRKD1	Phosphorylation	S399	0.023	0.162	_TIS(ph)PSTSNNIPLMR_
PRKD1	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD1	Phosphorylation	S744	-0.226	-0.287	_S(ph)VVGTPAYLAPEVLR_
PRKD2	Phosphorylation	S197	0.239	0.895	_RLS(ph)STSLASGHSVR_
PRKD2	Phosphorylation	T211		-0.119	_LGT(ph)SESLPCTAEELSR_
PRKD2	Phosphorylation	S212		0.113	_LGTS(ph)ESLPCTAEELSR_
PRKD2	Phosphorylation	S214	0.216	0.302	_LGTSES(ph)LPCTAEELSR_
PRKD2	Phosphorylation	S710	-0.413	-0.511	_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Phosphorylation	T714	-0.279		_S(ph)VVGTPAYLAPEVLLNQGYNR_
PRKD2	Ubiquitylation	K730		1.177	_IIGEK(gl)SFR_
PRKD2	Phosphorylation	S886	-0.718	-0.305	_DLGGACPPQDHDMQGLAERIS(ph)VL_
RAF1	Phosphorylation	S29	0.028	-0.571	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	T31	0.028	-0.669	_DAVFDGSSCIS(ph)PTIVQQFGYQR_
RAF1	Phosphorylation	S244		0.053	_YSTPHAFTFNTSS(ph)PSSEGSLSQR_
RAF1	Phosphorylation	S259	-0.069	0.054	_STS(ph)TPNVHM(ox)VSTTLPVDSR_
RAF1	Phosphorylation	S301		-0.651	_SHSESASPSALSSSPNNLS(ph)PTGWSQPK_
RAF1	Phosphorylation	T303		-0.664	_SHSESASPSALSSSPNNLSPT(ph)GWSQPK_
RAF1	Phosphorylation	S497		-0.449	_SRWS(ph)GSQQVEQPTGSVLWMAPEVIR_
RAF1	Phosphorylation	S621	0.212	0.271	_SAS(ph)EPSLHR_
RAF1	Phosphorylation	S642	-0.197	0.463	_AAHTEDINACTLTTS(ph)PR_
RIPK2	Ubiquitylation	K410	-2.810		_AAFCDHK(gl)TTPCSSAIINPLSTAGNSER_
RIPK2	Phosphorylation	S531	0.884	0.839	_SPS(ph)LNLLQNK_
RIPK2	Ubiquitylation	K538	-2.659		_SPSLNLLQNK(gl)SM_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
WNT5A	Ubiquitylation	K268		-0.304	_VGDALK(gl)EK_