RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
LDLRAP1	2	0.870	-0.890
DLG1	1	0.400	-0.220	1.552			0.102	0.488
TRAF2	1	-0.570	0.540
TRAF2	1	-0.570	0.540
PKP4	1	-0.200	1.770				1.061	0.147
CDH1	0	0.150	0.280	-0.623
FGFR3	0	-1.120	1.390
PTPN3	0	-0.300	0.200
RNF31	0	0.100	0.480
IKBKB	0	0.400	0.610
BIRC2	0	-0.730	0.440
BIRC2	0	-0.730	0.440
PTP4A1	0	0.520	-0.890				0.543	0.024
PTP4A1	0	0.520	-0.890
PTP4A1	0	0.520	-0.890
HTRA2	0	1.220	-0.530		0.602		-0.023	1.287
MAP2K2	0	-0.610	0.080
MAP2K2	0	-0.610	0.080
TRAF3	0	-1.050	1.040
DSG1	0	1.050	-0.690					-4.325
ACP1	0	1.790	-1.100				-0.468
CTNNB1	0	0.490	-0.230
CTNNB1	0	0.490	-0.230	-0.415			0.628	0.215
ASPSCR1	0	0.610	-1.080
DIABLO	0	0.740	-0.290				0.517	0.500
DIABLO	0	0.740	-0.290	-0.061
GNB1L	0	0.540	-0.860
GM2A	0	1.660	-0.700
CHUK	0			-0.480

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ASPSCR1	Phosphorylation	S275	-0.742	-0.230	_SLSS(ph)PGGPSKPK_
ASPSCR1	Phosphorylation	S500	-1.623	-1.535	_AAGS(ph)PSPLPAPDPAPK_
ASPSCR1	Phosphorylation	S502	-2.061	-2.218	_AAGSPS(ph)PLPAPDPAPK_
BIRC2	Ubiquitylation	K15	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K17	-0.259	0.307	_(ac)MEDSTILSDWTNSNK(gl)QK_
BIRC2	Ubiquitylation	K38	-0.069		_SIMEDSTILSDWTNSNKQK(gl)_
BIRC2	Ubiquitylation	K102		-1.755	_LGDSPIQK(gl)HK_
BIRC2	Ubiquitylation	K233	-0.511		_LSNWEPK(gl)DDAMSEHR_
BIRC2	Ubiquitylation	K410		0.878	_DLVK(gl)QTVQSK_
BIRC2	Ubiquitylation	K490	0.305	0.534	_ANVINK(gl)QEHDIIK_
BIRC2	Ubiquitylation	K497	-1.934		_ANVINKQEHDIIK(gl)QK_
CHUK	Ubiquitylation	K296		-1.637	_GGPVDLTLK(gl)QPR_
CTNNB1	Ubiquitylation	K158		-1.265	_AIPELTK(gl)LLNDEDQVVVNK_
CTNNB1	Ubiquitylation	K180	-0.546	-0.636	_AAVM(ox)VHQLSK(gl)K_
CTNNB1	Ubiquitylation	K181	-0.717	-0.729	_AAVMVHQLSKK(gl)_
CTNNB1	Phosphorylation	S191	-0.024	0.129	_S(ph)PQMVSAIVR_
CTNNB1	Ubiquitylation	K435		-0.350	_NK(gl)MM(ox)VCQVGGIEALVR_
CTNNB1	Ubiquitylation	K496		-1.262	_LHYGLPVVVK(gl)_
CTNNB1	Phosphorylation	S552	1.233	1.224	_RTS(ph)MGGTQQQFVEGVR_
CTNNB1	Phosphorylation	T556	1.275	0.995	_RTSM(ox)GGT(ph)QQQFVEGVR_
CTNNB1	Ubiquitylation	K671	-0.941	-0.934	_MSEDKPQDYK(gl)K_
DLG1	Phosphorylation	S102	-1.455		_SKPSEPIQPVNTWEISSLPSSTVTSETLPSSLS(ph)PSVEK_
DLG1	Phosphorylation	T115	-0.707	-1.378	_YQDEDT(ph)PPQEHISPQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S122		-1.073	_YQDEDTPPQEHIS(ph)PQITNEVIGPELVHVSEK_
DLG1	Phosphorylation	S158		0.773	_NLSEIENVHGFVSHSHIS(ph)PIK_
DLG1	Ubiquitylation	K321	1.264	1.435	_IMEIK(gl)LIK_
DLG1	Ubiquitylation	K361	0.180		_IIEGGAAHK(gl)DGK_
DLG1	Ubiquitylation	K452	-0.704		_YSPVSK(gl)AVLGDDEITREPR_
DLG1	Ubiquitylation	K556	0.105		_FEAK(gl)IHDLR_
DLG1	Phosphorylation	S573	0.697		_EQM(ox)M(ox)NSSISSGS(ph)GSLR_
DLG1	Phosphorylation	S575	0.255	0.729	_EQMMNSSISSGSGS(ph)LR_
DLG1	Ubiquitylation	K843	1.259		_SMENIMEMNK(gl)R_
FGFR3	Ubiquitylation	K205		-0.115	_IGGIK(gl)LR_
GM2A	Ubiquitylation	K179		0.422	_IESVLSSSGK(gl)R_
GNB1L	Ubiquitylation	K155		-0.889	_TSVCALK(gl)PK_
HTRA2	Ubiquitylation	K237	-1.868	-0.270	_IQTK(gl)EPLPTLPLGR_
IKBKB	Ubiquitylation	K106	0.253		_K(gl)YLNQFENCCGLR_
IKBKB	Phosphorylation	S672	0.670	0.244	_GPVSGS(ph)PDSMNASR_
LDLRAP1	Ubiquitylation	K5	6.085	8.895	_(ac)MDALK(gl)SAGR_
LDLRAP1	Phosphorylation	S14	-0.662	0.149	_ALIRS(ph)PSLAK_
MAP2K2	Phosphorylation	S23	0.873	0.258	_RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK_
MAP2K2	Phosphorylation	T25		0.439	_RKPVLPALTINPTIAEGPSPT(ph)SEGASEANLVDLQK_
MAP2K2	Ubiquitylation	K192	-0.205	-0.241	_DVK(gl)PSNILVNSR_
MAP2K2	Phosphorylation	S293		-0.361	_ELEAIFGRPVVDGEEGEPHS(ph)ISPR_
MAP2K2	Phosphorylation	S295	-0.234	0.026	_ELEAIFGRPVVDGEEGEPHSIS(ph)PR_
MAP2K2	Phosphorylation	T394	0.570	0.158	_LNQPGT(ph)PTR_
PKP4	Phosphorylation	S75	0.390	-0.006	_LGAES(ph)PSIASTSSTEK_
PKP4	Phosphorylation	S221	-0.272	-0.602	_AQS(ph)PSYVISTGVS(ph)PSR_
PKP4	Phosphorylation	S231	-0.562	-0.103	_AQS(ph)PSYVISTGVS(ph)PSR_
PKP4	Phosphorylation	S273	-0.230	-0.252	_AAS(ph)PYSQRPAS(ph)PTAIR_
PKP4	Phosphorylation	S276	-0.230	0.429	_AAS(ph)PYS(ph)QRPASPTAIR_
PKP4	Phosphorylation	S281	0.155	0.243	_AAS(ph)PYSQRPAS(ph)PTAIR_
PKP4	Phosphorylation	S314	0.714	0.627	_VGS(ph)PLTLTDAQTR_
PKP4	Phosphorylation	S327	0.346	0.137	_VAS(ph)PSQGQVGS(ph)SSPK_
PKP4	Phosphorylation	S336	0.308	0.260	_VASPSQGQVGSS(ph)SPKR_
PKP4	Phosphorylation	S337	0.059	-0.044	_VAS(ph)PSQGQVGSSS(ph)PK_
PKP4	Phosphorylation	S406	0.873	0.653	_SAVS(ph)PDLHITPIYEGR_
PKP4	Phosphorylation	S447	0.245	0.506	_TGS(ph)VGIGNLQR_
PKP4	Ubiquitylation	K518	-1.745	-1.024	_SPSIDSIQK(gl)DPR_
PKP4	Phosphorylation	S776		1.519	_LLGLNELDDLLGKES(ph)PSKDSEPSCWGK_
PTP4A1	Ubiquitylation	K15	-0.505		_MNRPAPVEVTYK(gl)NMR_
PTP4A1	Ubiquitylation	K141	1.064	1.099	_GAFNSK(gl)QLLYLEK_
PTPN3	Phosphorylation	S359	0.897	0.812	_SLS(ph)VEHLETK_
RNF31	Phosphorylation	S466	-0.887	-0.631	_RLS(ph)APLPSSCGDPEK_
RNF31	Ubiquitylation	K783	-0.992	-0.032	_ESLEPDAYALFHK(gl)K_
RNF31	Ubiquitylation	K784	-0.992	-0.032	_ESLEPDAYALFHK(gl)K_
RNF31	Ubiquitylation	K848		-1.009	_SCEDFQNWK(gl)R_
TRAF2	Phosphorylation	T7	-0.822	-1.190	_(ac)AAASVT(ph)PPGSLELLQPGFSK_
TRAF2	Ubiquitylation	K27	-0.253	2.194	_TLLGTK(gl)LEAK_
TRAF2	Ubiquitylation	K119		0.519	_GTLK(gl)EYESCHEGR_
TRAF2	Ubiquitylation	K176	-1.233	1.022	_APCCGADVK(gl)AHHEVCPK_
TRAF2	Ubiquitylation	K207	0.147	0.918	_FQDHVK(gl)TCGK_
TRAF2	Ubiquitylation	K481	-0.507	0.417	_MEAK(gl)NSYVR_
TRAF3	Ubiquitylation	K369	-1.061	-2.137	_VTELESVDK(gl)SAGQVAR_