RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
MAPK14	2	-0.160	-0.350
ATF2	2	-1.380	1.800
HMGN1	2	-0.050	0.130
HMGN1	2	-0.050	0.130
TRAF2	1	-0.570	0.540
TRAF2	1	-0.570	0.540
MAP2K4	0	-0.300	0.320
MEF2A	0	0.820	-0.530
MEF2A	0	0.820	-0.530
CDC42	0	-0.170	0.490	-0.597			-1.527	-1.013
CDC42	0	1.240	-0.940	-0.597			-1.527	-1.013
MEF2C	0	-0.980	1.550
MEF2C	0	-0.980	1.550
MAPKAPK5	0	1.100	-0.730
MAP3K1	0	0.750	-1.270
TGFB1	0	-0.550	1.050
HSPB1	0	0.710	-0.660	-0.632
TGFBR1	0	-0.260	0.020
MAP2K6	0	1.270	-0.780
RAPGEF2	0	-0.860	1.560
STAT1	0	-0.550	0.170
MEF2D	0	-0.080	-0.210
MEF2D	0	-0.080	-0.210
MEF2D	0	-0.080	-0.210
CREB1	0	1.080	-0.800			-1.027
TGFB3	0	0.900	-0.540
MAX	0	-0.780	0.530		-0.276	0.290
MAX	0	-0.780	0.530
ELK1	0
MAP3K7	0	-1.120	1.140	-1.048
RAC1	0	-0.580	1.580	0.486			-0.364	-0.568
MYC	0	0.170	0.550	-2.443	-0.949	-0.454		-1.290
RIPK1	0	-0.190	0.440
HRAS	0	1.470	-0.520
GRB2	0	-0.240	0.300		-1.021	0.057	0.906
MAP3K5	0	0.710	-0.770
DAXX	0	0.430	-1.030
DAXX	0	0.430	-1.030		-0.712	0.311

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
ATF2	Phosphorylation	T71	-1.263	-1.166	_NDSVIVADQTPT(ph)PTR_
ATF2	Phosphorylation	S90	2.624	2.389	_NCEEVGLFNELAS(ph)PFENEFKK_
ATF2	Phosphorylation	S112	1.025	1.118	_MPLDLS(ph)PLATPIIR_
CDC42	Ubiquitylation	K173	-1.839		_DDPSTIEK(gl)LAK_
CDC42	Ubiquitylation	K178	-0.801	-0.716	_NK(gl)QKPITPETAEK_
CDC42	Ubiquitylation	K180	-1.806		_QK(gl)PITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K189	-1.082		_QKPITPETAEK(gl)LAR_
CDC42	Ubiquitylation	K198	0.550	1.159	_AVK(gl)YVECSALTQK_
CDC42	Ubiquitylation	K208	-0.937	0.038	_YVECSALTQK(gl)GLK_
CDC42	Ubiquitylation	K228	-2.488		_NVFDEAILAALEPPEPK(gl)K_
CDC42	Ubiquitylation	K229	-1.254		_NVFDEAILAALEPPEPKK(gl)_
CREB1	Phosphorylation	S271	-0.979	-1.450	_TAPTSTIAPGVVM(ox)ASS(ph)PALPTQPAEEAAR_
CREB1	Ubiquitylation	K333	1.343		_ALK(gl)DLYCHK_
DAXX	Phosphorylation	S33	-2.344	-2.634	_(ac)ATANSIIVLDDDDEDEAAAQPGPSHPLPNAAS(ph)PGAEAPSSSEPHGAR_
DAXX	Phosphorylation	S178	-1.839	-1.808	_KLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQS(ph)PR_
DAXX	Ubiquitylation	K255	1.051	-0.046	_LCELK(gl)DCSSLTGR_
DAXX	Ubiquitylation	K289	-0.127		_LINK(gl)PGPDTFPDYGDVLR_
DAXX	Ubiquitylation	K390	0.502		_LDEVISK(gl)YAMLQDK_
DAXX	Phosphorylation	S495	0.727	0.865	_DGDKS(ph)PMSSLQISNEK_
DAXX	Phosphorylation	S671	-0.877	-1.038	_ICTLPSPPS(ph)PLASLAPVADSSTR_
DAXX	Phosphorylation	S675	-0.654		_KICTLPSPPSPLAS(ph)LAPVADSSTR_
DAXX	Phosphorylation	S688	-0.111	-0.664	_VDS(ph)PSHGLVTSSLCIPSPAR_
DAXX	Phosphorylation	S690	-0.048		_VDS(ph)PSHGLVTSSLCIPSPAR_
DAXX	Phosphorylation	S702	-0.432	-0.620	_VDSPSHGLVTSSLCIPS(ph)PAR_
ELK1	Phosphorylation	S273	-0.601	-0.553	_PAVVLPSAAPAGAAAPPS(ph)GSR_
ELK1	Phosphorylation	S275	-0.601	-0.553	_PAVVLPSAAPAGAAAPPS(ph)GSR_
ELK1	Phosphorylation	S403	0.568	-0.579	_DLELPLS(ph)PSLLGGPGPER_
GRB2	Ubiquitylation	K10	0.146		_YDFK(gl)ATADDELSFK_
GRB2	Ubiquitylation	K20	-0.078		_ATADDELSFK(gl)R_
GRB2	Ubiquitylation	K69	-0.362	0.641	_AK(gl)AEEMLSK_
GRB2	Ubiquitylation	K76	0.754		_AEEMLSK(gl)QR_
GRB2	Ubiquitylation	K109	0.381	-0.002	_FGNDVQHFK(gl)VLR_
HMGN1	Phosphorylation	S7	1.696	0.085	_KVS(ph)SAEGAAKEEPK_
HMGN1	Phosphorylation	S8	0.243	0.475	_VSS(ph)AEGAAKEEPK_
HMGN1	Ubiquitylation	K30	1.557		_VSSAEGAAK(gl)EEPK_
HMGN1	Phosphorylation	S86	0.276	0.310	_TEES(ph)PASDEAGEKEAK_
HMGN1	Phosphorylation	S89	0.009		_TEESPAS(ph)DEAGEKEAK_
HMGN1	Phosphorylation	S99	0.293	0.342	_TEESPASDEAGEKEAKS(ph)D_
HRAS	Ubiquitylation	K170	-1.005		_K(gl)LNPPDESGPGCMSCK_
HSPB1	Phosphorylation	S82	1.036	0.723	_QLS(ph)SGVSEIR_
HSPB1	Ubiquitylation	K198		-1.654	_AQLGGPEAAK(gl)SDETAAK_
MAP2K4	Phosphorylation	S80		0.441	_LRTHS(ph)IESSGK_
MAP2K6	Phosphorylation	T28	-1.813	-0.792	_EAFEQPQTSST(ph)PPRDLDSK_
MAP2K6	Ubiquitylation	K232		0.220	_INPELNQK(gl)GYSVK_
MAP3K1	Phosphorylation	S292		0.209	_RAPS(ph)PDGFSPYSPEETNR_
MAP3K1	Phosphorylation	S506	1.427		_SHDFYSHELS(ph)SPVDSPSSLR_
MAP3K1	Phosphorylation	S507		1.436	_SHDFYSHELSS(ph)PVDSPSSLR_
MAP3K1	Phosphorylation	S923	0.127	-0.120	_LSAS(ph)SEDISER_
MAP3K5	Phosphorylation	S1066		-1.241	_SISLPVPVLVEDTSSSSEYGSVS(ph)PDTELKVDPFSFK_
MAP3K5	Phosphorylation	S1113	-1.408	-0.562	_TLFLGIPDENFEDHSAPPS(ph)PEEK_
MAP3K7	Phosphorylation	S374	0.149	-0.337	_GS(ph)SVESLPPTSEGK_
MAP3K7	Phosphorylation	S375	0.171	-0.087	_GSS(ph)VESLPPTSEGK_
MAP3K7	Phosphorylation	S389	1.072	1.445	_RMS(ph)ADMSEIEAR_
MAP3K7	Phosphorylation	S439	0.246	0.198	_S(ph)IQDLTVTGTEPGQVSSR_
MAP3K7	Ubiquitylation	K474	-0.385	-0.242	_MITTSGPTSEK(gl)PTR_
MAP3K7	Ubiquitylation	K589	-0.104		_SLSTYYQQCK(gl)K_
MAP3K7	Ubiquitylation	K590	-0.551	0.560	_K(gl)QLEVIR_
MAPK14	Phosphorylation	S2	3.221	3.623	_(ac)S(ph)QERPTFYR_
MAPK14	Phosphorylation	T180	0.958	1.087	_HTDDEM(ox)T(ph)GYVATR_
MAPK14	Phosphorylation	Y182	1.388	1.374	_HTDDEM(ox)TGY(ph)VATR_
MAPK14	Ubiquitylation	K249	0.073	-1.380	_LVGTPGAELLKK(gl)_
MAPKAPK5	Phosphorylation	T182	-0.559	-0.706	_IDQGDLM(ox)T(ph)PQFTPYYVAPQVLEAQR_
MAX	Phosphorylation	S2	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S2	0.510	0.568	_(ac)S(ph)DNDDIEVESDADKR_
MAX	Phosphorylation	S11	0.341	-0.060	_(ac)S(ph)DNDDIEVES(ph)DEEQPR_
MAX	Phosphorylation	S11	-0.408	0.069	_(ac)S(ph)DNDDIEVES(ph)DADKR_
MAX	Ubiquitylation	K57	-0.903	0.246	_DSVPSLQGEK(gl)ASR_
MEF2A	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2A	Phosphorylation	S235	0.664	-0.092	_AS(ph)PNLIGATGANSLGK_
MEF2A	Phosphorylation	T253		-1.271	_VMPT(ph)KSPPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S255		-1.235	_VMPTKS(ph)PPPPGGGNLGMNSR_
MEF2A	Phosphorylation	S408	-0.173	-0.049	_SEPIS(ph)PPRDR_
MEF2A	Phosphorylation	S494	-0.858	-1.232	_GDFHSPIVLGRPPNTEDRES(ph)PSVK_
MEF2C	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2C	Phosphorylation	S240	0.008	0.302	_NS(ph)PGLLVSPGNLNK_
MEF2C	Phosphorylation	S406	0.272	0.338	_SEPVS(ph)PPRDR_
MEF2D	Ubiquitylation	K23		-0.140	_QVTFTK(gl)R_
MEF2D	Phosphorylation	S184	-1.118	-1.050	_VIPAKS(ph)PPPPTHSTQLGAPSR_
MEF2D	Phosphorylation	S185	0.259	-0.467	_LLS(ph)PQQPALQR_
MEF2D	Phosphorylation	S377	0.418	0.181	_SEPVS(ph)PSRER_
MYC	Phosphorylation	S20	-1.444	-1.145	_PLNVS(ph)FTNR_
MYC	Phosphorylation	T72	-1.699	-1.813	_FELLPT(ph)PPLS(ph)PSRR_
MYC	Phosphorylation	S76	-1.777	-1.435	_FELLPTPPLS(ph)PSR_
MYC	Phosphorylation	S81		0.459	_S(ph)GLCSPSYVAVTPFSLR_
MYC	Phosphorylation	S85	0.199	0.073	_SGLCS(ph)PSYVAVTPFSLR_
MYC	Ubiquitylation	K162	-2.475	-1.259	_LVSEK(gl)LASYQAAR_
MYC	Phosphorylation	S295		-0.903	_SESGS(ph)PSAGGHSKPPHSPLVLK_
MYC	Phosphorylation	S307		-1.486	_SES(ph)GSPSAGGHSKPPHS(ph)PLVLK_
MYC	Ubiquitylation	K340		-2.449	_VK(gl)LDSVR_
MYC	Ubiquitylation	K403		-3.432	_DQIPELENNEK(gl)APK_
RAC1	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RAC1	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RAC1	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RAC1	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RAC1	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RAC1	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RAC1	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RAC1	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
RAPGEF2	Phosphorylation	S1022	0.043	-0.570	_SETS(ph)PVAPR_
RAPGEF2	Phosphorylation	S1080	-0.612		_DLPPFGINS(ph)PQALK_
RIPK1	Ubiquitylation	K642	-0.431		_EGIK(gl)GATVGK_
STAT1	Phosphorylation	S727	1.377	0.974	_LQTTDNLLPMS(ph)PEEFDEVSR_
TGFB1	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFB3	Ubiquitylation	K50		-0.557	_GQILSK(gl)LR_
TGFBR1	Ubiquitylation	K449	-0.991		_VVCEQK(gl)LRPNIPNR_
TGFBR1	Ubiquitylation	K502	0.553	0.430	_TLSQLSQQEGIK(gl)M_
TRAF2	Phosphorylation	T7	-0.822	-1.190	_(ac)AAASVT(ph)PPGSLELLQPGFSK_
TRAF2	Ubiquitylation	K27	-0.253	2.194	_TLLGTK(gl)LEAK_
TRAF2	Ubiquitylation	K119		0.519	_GTLK(gl)EYESCHEGR_
TRAF2	Ubiquitylation	K176	-1.233	1.022	_APCCGADVK(gl)AHHEVCPK_
TRAF2	Ubiquitylation	K207	0.147	0.918	_FQDHVK(gl)TCGK_
TRAF2	Ubiquitylation	K481	-0.507	0.417	_MEAK(gl)NSYVR_