RNAi screen result	RNAPII IP (MG132)	CSB IP	CSB IP (MG132)	Chrom.	Chrom. (MG132)	Ubi /Phospo	Ubi /Phospho (MG132)
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Gene name	MGoogle Score	RNAi high	RNAi low	RNAPII-IP (MG132)	CSB-IP	CSB-IP (MG132)	Chrom.	Chrom. (MG132)
GSK3B	2	1.020	-0.870				-1.128	1.091
INSR	2	-0.850	0.830				1.143	0.785
PPP1CC	2	0.390	-0.090
PPP1CC	2	0.390	-0.090	0.568	0.526	0.917	-0.533	0.173
YWHAE	1	0.440	-0.380		1.095	-0.160
YWHAE	1	0.440	-0.380	1.129			0.621	0.321
YWHAQ	1	-0.260	0.670	0.606	0.369	-0.163	0.594	0.478
PRKCZ	0	-0.290	0.310
STX4	0	1.010	-1.210				-0.201	-0.827
GYS1	0	1.000	-0.130	-0.800			0.561	0.380
AKT2	0	-1.420	2.210	-0.194
LNPEP	0	0.680	0.260				0.752	0.610
LNPEP	0	0.910	-0.940				0.752	0.610
RHOQ	0	0.310	-0.560	0.486			-0.364	-0.568
RHOQ	0	1.120	-0.210	0.486			-0.364	-0.568
RHOQ	0	0.310	-0.560
RHOQ	0	1.120	-0.210
TRIP10	0	0.140	-0.170
YWHAH	0	0.000	0.080		1.206	0.159
YWHAH	0	0.000	0.080	0.546			0.338	0.541
TBC1D4	0	1.700	-0.820	-0.137			-2.080
AKT1	0	-0.050	0.700
AKT1	0	0.860	-0.040
PRKCI	0	0.730	-0.460	1.483			0.192	0.350
YWHAZ	0	0.880	-0.450	0.433	1.494	-0.337	0.631	0.064
STXBP4	0	0.810	0.110
YWHAB	0				0.628	-0.543
YWHAB	0			0.507			0.271	0.503
YWHAG	0				0.298	-0.025
YWHAG	0			1.488			0.233	0.098
SFN	0	0.890	0.120				-4.300
VAMP2	0						0.418
VAMP2	0

Gene name	PTM type	PTM site	UV	UV (MG132)	Sequence
AKT1	Phosphorylation	S124	0.252	0.311	_SGS(ph)PSDNSGAEEMEVSLAKPK_
AKT1	Phosphorylation	S126	-0.241		_SGSPS(ph)DNSGAEEM(ox)EVSLAK_
AKT1	Ubiquitylation	K301	0.988		_EGIK(gl)DGATMK_
AKT2	Ubiquitylation	K14	0.306	0.070	_EGWLHK(gl)R_
AKT2	Ubiquitylation	K111	1.082		_AIQMVANSLK(gl)QR_
AKT2	Ubiquitylation	K160		0.251	_LLGK(gl)GTFGK_
AKT2	Phosphorylation	T451	-0.091	-0.612	_YFDDEFTAQSITIT(ph)PPDRYDSLGLLELDQR_
AKT2	Phosphorylation	Y456		-0.265	_YFDDEFTAQSITITPPDRY(ph)DSLGLLELDQR_
GSK3B	Phosphorylation	S9	-0.483	0.010	_TTS(ph)FAESCKPVQQPSAFGSMK_
GSK3B	Ubiquitylation	K85		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Ubiquitylation	K86		-0.204	_LCDSGELVAIK(gl)K_
GSK3B	Phosphorylation	S215	0.296	0.477	_GEPNVS(ph)YICSR_
GSK3B	Phosphorylation	Y216	0.356	0.376	_GEPNVSY(ph)ICSR_
GSK3B	Phosphorylation	T390	2.800	2.527	_IQAAAST(ph)PTNATAASDANTGDR_
GYS1	Ubiquitylation	K88	-1.746	-1.039	_TQVELLEAPTPALK(gl)R_
GYS1	Ubiquitylation	K381	-0.746	-0.708	_TNNFNVETLK(gl)GQAVR_
GYS1	Phosphorylation	S727	0.148	-0.041	_RNSVDTATSSSLSTPSEPLS(ph)PTSSLGEERN_
INSR	Ubiquitylation	K1022	-0.603		_EK(gl)ITLLR_
INSR	Ubiquitylation	K1047	0.305	0.711	_DIIK(gl)GEAETR_
INSR	Ubiquitylation	K1057	0.482	0.484	_VAVK(gl)TVNESASLR_
INSR	Ubiquitylation	K1352	1.606	2.754	_DGGSSLGFK(gl)R_
LNPEP	Phosphorylation	S91	0.531	0.825	_SSGLRNS(ph)ATGYR_
PPP1CC	Ubiquitylation	K35	-0.280	-0.504	_GSKPGK(gl)NVQLQENEIR_
PPP1CC	Ubiquitylation	K50	-0.131	0.478	_GLCLK(gl)SR_
PPP1CC	Ubiquitylation	K150	0.321	0.619	_IYGFYDECK(gl)RR_
PPP1CC	Ubiquitylation	K156	0.883	1.047	_YNIK(gl)LWK_
PPP1CC	Ubiquitylation	K247	0.313		_FLHK(gl)HDLDLICR_
PPP1CC	Ubiquitylation	K269	2.628	2.591	_AHQVVEDGYEFFAK(gl)R_
PPP1CC	Phosphorylation	T320		-0.561	_KPNATRPVT(ph)PPR_
PPP1CC	Ubiquitylation	K328	0.848	0.425	_GMITK(gl)QAK_
PRKCI	Ubiquitylation	K244	0.289		_ESGK(gl)ASSSLGLQDFDLLR_
PRKCI	Ubiquitylation	K488	-0.090	0.847	_SLSVK(gl)AASVLK_
PRKCZ	Phosphorylation	T560	-0.884	-1.578	_KQALPPFQPQITDDYGLDNFDTQFTSEPVQLT(ph)PDDEDAIKR_
RHOQ	Ubiquitylation	K115	-1.745	-0.215	_AK(gl)WYPEVR_
RHOQ	Ubiquitylation	K139	0.125		_LNDMK(gl)EKPICVEQGQK_
RHOQ	Ubiquitylation	K141	0.125		_LNDMK(gl)EKPICVEQGQK_
RHOQ	Ubiquitylation	K142	0.492		_LDLRDDK(gl)DTIEK_
RHOQ	Ubiquitylation	K152	0.099	-0.292	_K(gl)LTPITYPQGLAMAK_
RHOQ	Ubiquitylation	K166	-0.981	-0.655	_LTPITYPQGLAMAK(gl)EIGAVK_
RHOQ	Ubiquitylation	K172	1.026	0.412	_EIGAVK(gl)YLECSALTQR_
RHOQ	Ubiquitylation	K185	-0.113	0.578	_GLK(gl)TVFDEAIR_
RHOQ	Ubiquitylation	K202	-1.379	-1.447	_AVLCPPPVK(gl)KR_
RHOQ	Ubiquitylation	K203	-1.708	-1.447	_AVLCPPPVKK(gl)_
SFN	Ubiquitylation	K11	0.561	0.388	_AK(gl)LAEQAER_
SFN	Ubiquitylation	K49	-0.093	0.337	_NLLSVAYK(gl)_
STX4	Ubiquitylation	K54	-0.229		_QTIVK(gl)LGNK_
STX4	Ubiquitylation	K58	0.607	0.599	_LGNK(gl)VQELEK_
STX4	Ubiquitylation	K102	-0.242		_LQLK(gl)AIEPQKEEADENYNSVNTR_
STX4	Ubiquitylation	K108	0.674		_AIEPQK(gl)EEADENYNSVNTR_
STXBP4	Phosphorylation	S6		0.972	_(ac)MNKNTS(ph)TVVSPS(ph)LLEK_
STXBP4	Ubiquitylation	K487		-0.179	_ELVK(gl)SVR_
TBC1D4	Phosphorylation	S262	-2.075		_GPDPGEDLADLEVVVPGS(ph)PGDCLPEEADGTDTHLGLPAGASQPALTSSR_
TBC1D4	Phosphorylation	S341	-0.345	-0.244	_HAS(ph)APSHVQPSDSEK_
TBC1D4	Phosphorylation	S569	0.531	0.754	_SLTS(ph)SLENIFSR_
TBC1D4	Phosphorylation	S570	0.511	0.509	_SLTSS(ph)LENIFSR_
TBC1D4	Phosphorylation	S588	0.602	0.593	_LGS(ph)VDSFER_
TBC1D4	Phosphorylation	S591	0.887	1.498	_LGSVDS(ph)FER_
TBC1D4	Phosphorylation	S666	0.266	0.439	_AQGVRS(ph)PLLR_
TBC1D4	Phosphorylation	S751		0.968	_TSS(ph)T(ph)CSNESLSVGGTSVTPR_
TBC1D4	Phosphorylation	T752		0.968	_TSS(ph)T(ph)CSNESLSVGGTSVTPR_
TBC1D4	Phosphorylation	S754	0.832	0.968	_TS(ph)STCS(ph)NESLSVGGTSVTPR_
TBC1D4	Phosphorylation	S787	0.077		_VASPMNKS(ph)PSAMQQQDGLDR_
TRIP10	Phosphorylation	S296	0.064	0.030	_APS(ph)DSSLGTPSDGRPELR_
VAMP2	Ubiquitylation	K54	0.408	0.792	_VNVDK(gl)VLER_
VAMP2	Phosphorylation	S58	-0.407	0.612	_ADALQAGAS(ph)QFETSAAK_
VAMP2	Ubiquitylation	K61	0.558	0.387	_VLERDQK(gl)LSELDDR_
VAMP2	Phosphorylation	S63		0.374	_ADALQAGASQFETS(ph)AAK_
YWHAB	Ubiquitylation	K11	1.057	1.322	_(ac)TMDKSELVQK(gl)AK_
YWHAB	Ubiquitylation	K13	0.060	0.388	_AK(gl)LAEQAER_
YWHAB	Ubiquitylation	K70	0.558	-0.175	_VISSIEQK(gl)TER_
YWHAB	Ubiquitylation	K140		0.531	_YLSEVASGDNK(gl)QTTVSNSQQAYQEAFEISKK_
YWHAB	Ubiquitylation	K159	0.300		_QTTVSNSQQAYQEAFEISK(gl)K_
YWHAB	Ubiquitylation	K160	-0.439	-0.371	_K(gl)EMQPTHPIR_
YWHAE	Ubiquitylation	K38	0.710	1.822	_YDEMVESMK(gl)K_
YWHAE	Ubiquitylation	K39		1.734	_YDEMVESMKK(gl)_
YWHAE	Ubiquitylation	K60	0.554	1.732	_NLLSVAYK(gl)NVIGAR_
YWHAE	Ubiquitylation	K83	0.375	0.643	_IISSIEQKEENK(gl)GGEDKLK_
YWHAE	Ubiquitylation	K90	1.103		_GGEDKLK(gl)MIR_
YWHAE	Ubiquitylation	K116	-0.289		_LICCDILDVLDK(gl)HLIPAANTGESK_
YWHAE	Ubiquitylation	K133	0.653	1.264	_VFYYK(gl)M(ox)K_
YWHAE	Ubiquitylation	K152	0.031	0.601	_K(gl)EAAENSLVAYK_
YWHAE	Phosphorylation	S210	0.534	0.506	_AAFDDAIAELDTLS(ph)EESYK_
YWHAE	Phosphorylation	S213		0.541	_AAFDDAIAELDTLSEES(ph)YK_
YWHAG	Ubiquitylation	K10	1.000	1.070	_VDREQLVQK(gl)AR_
YWHAG	Ubiquitylation	K69	0.708	1.242	_VISSIEQK(gl)TSADGNEK_
YWHAG	Ubiquitylation	K120		1.386	_NCSETQYESK(gl)VFYLK_
YWHAG	Ubiquitylation	K125	0.512	0.946	_VFYLK(gl)MK_
YWHAG	Ubiquitylation	K142	0.456	0.610	_YLAEVATGEK(gl)R_
YWHAH	Ubiquitylation	K143	0.540		_YLAEVASGEKK(gl)_
YWHAQ	Ubiquitylation	K3		0.827	_(ac)MEK(gl)TELIQK_
YWHAQ	Ubiquitylation	K9	0.588	0.253	_(ac)MEKTELIQK(gl)AK_
YWHAQ	Ubiquitylation	K11	0.561	0.388	_AK(gl)LAEQAER_
YWHAQ	Ubiquitylation	K27	-0.849		_YDDMATCMK(gl)AVTEQGAELSNEER_
YWHAQ	Ubiquitylation	K49	0.260	0.469	_NLLSVAYK(gl)NVVGGR_
YWHAQ	Ubiquitylation	K68	0.288		_VISSIEQK(gl)TDTSDKK_
YWHAQ	Ubiquitylation	K74	0.305		_TDTSDK(gl)KLQLIK_
YWHAQ	Ubiquitylation	K75	0.253		_TDTSDKK(gl)LQLIK_
YWHAQ	Ubiquitylation	K80	0.655	1.500	_LQLIK(gl)DYR_
YWHAQ	Ubiquitylation	K85	0.110		_EK(gl)VESELR_
YWHAQ	Ubiquitylation	K120	0.512	0.946	_VFYLK(gl)MK_
YWHAQ	Ubiquitylation	K122	0.426	0.859	_MK(gl)GDYFR_
YWHAQ	Ubiquitylation	K158	-0.439	-0.371	_K(gl)EMQPTHPIR_
YWHAZ	Ubiquitylation	K3	0.268	0.388	_(ac)MDK(gl)NELVQK_
YWHAZ	Ubiquitylation	K9	0.917	0.954	_(ac)MDKNELVQK(gl)AK_
YWHAZ	Ubiquitylation	K11	0.016	0.388	_AK(gl)LAEQAERYDDMAACMK_
YWHAZ	Ubiquitylation	K49	0.656	1.019	_NLLSVAYK(gl)NVVGAR_
YWHAZ	Ubiquitylation	K68	0.504		_VVSSIEQK(gl)TEGAEK_
YWHAZ	Ubiquitylation	K74	0.762		_VVSSIEQKTEGAEK(gl)K_
YWHAZ	Ubiquitylation	K85	-0.089		_EK(gl)IETELR_
YWHAZ	Ubiquitylation	K122	0.498	0.837	_MK(gl)GDYYR_
YWHAZ	Ubiquitylation	K138	0.560	1.003	_YLAEVAAGDDK(gl)K_
YWHAZ	Ubiquitylation	K139	0.551	1.003	_YLAEVAAGDDKK(gl)_
YWHAZ	Ubiquitylation	K166	-0.439	-0.371	_K(gl)EMQPTHPIR_